* using log directory 'd:/Rcompile/CRANpkg/gllm.Rcheck' * checking for file 'gllm/DESCRIPTION' ... OK * checking if this is a source package ... OK * checking whether package 'gllm' can be installed ... OK * checking package directory ... OK * checking for portable file names ... OK * checking DESCRIPTION meta-information ... OK * checking package dependencies ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for syntax errors ... OK * checking R files for library.dynam ... OK * checking S3 generic/method consistency ... OK * checking for replacement functions with final arg not named 'value' ... OK * checking foreign function calls ... WARNING Foreign function calls without 'PACKAGE' argument: .Fortran("gllm", ...) * checking Rd files ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... WARNING Codoc mismatches from documentation object 'emgllm': emgllm Code: function(y, s, X, maxit = 1000, tol = 1e-05) Docs: function(y, s, X, maxit = 1000, tol = 1e-07) Codoc mismatches from documentation object 'scoregllm': scoregllm Code: function(y, s, X, m, tol = 1e-05) Docs: function(y, s, X, m, tol = 1e-08) * checking Rd \usage sections ... OK * checking for CRLF line endings in C sources/headers ... OK * creating gllm-Ex.R ... OK * checking examples ... OK * creating gllm-manual.tex ... OK * checking gllm-manual.tex ... OK