* using log directory 'd:/Rcompile/CRANpkg/phyloarray.Rcheck' * using R version 2.1.1, 2005-06-16 * checking for file 'phyloarray/DESCRIPTION' ... OK * this is package 'phyloarray' version '0.1-1' * checking if this is a source package ... OK * checking whether package 'phyloarray' can be installed ... OK * checking package directory ... OK * checking for portable file names ... OK * checking DESCRIPTION meta-information ... OK * checking package dependencies ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for syntax errors ... OK * checking R files for library.dynam ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking Rd files ... WARNING Rd files without 'keyword': d:/Rcompile/CRANpkg/phyloarray/man/Phylodata.Rd d:/Rcompile/CRANpkg/phyloarray/man/Probes.csv.Rd d:/Rcompile/CRANpkg/phyloarray/man/Scandataraw.Rd d:/Rcompile/CRANpkg/phyloarray/man/calcbackground.Rd d:/Rcompile/CRANpkg/phyloarray/man/getprobes.Rd d:/Rcompile/CRANpkg/phyloarray/man/histcutoffs.Rd d:/Rcompile/CRANpkg/phyloarray/man/initdata.Rd d:/Rcompile/CRANpkg/phyloarray/man/plotbackground.Rd d:/Rcompile/CRANpkg/phyloarray/man/plotmeltingcurve.Rd d:/Rcompile/CRANpkg/phyloarray/man/probes2probenames.Rd d:/Rcompile/CRANpkg/phyloarray/man/readgenepix.Rd d:/Rcompile/CRANpkg/phyloarray/man/sortdata.Rd These entries are required in an Rd file. See chapter 'Writing R documentation files' in manual 'Writing R Extensions'. * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * creating phyloarray-Ex.R ... OK * checking examples ... OK * creating phyloarray-manual.tex ... OK * checking phyloarray-manual.tex ... OK