* using log directory 'd:/Rcompile/CRANpkg/local/2.5/rsbml.Rcheck' * using R version 2.5.1 (2007-06-27) * checking for file 'rsbml/DESCRIPTION' ... OK * this is package 'rsbml' version '1.2-1' * checking package dependencies ... OK * checking if this is a source package ... OK * checking whether package 'rsbml' can be installed ... OK * checking package directory ... OK * checking for portable file names ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... WARNING Loading required package: graph Loading required package: methods Error in paste(normalizePath(file.path(libname, pkgname, "libs")), file.path(Sys.getenv("R_HOME"), : could not find function "normalizePath" In addition: Warning message: 'Sys.putenv' is deprecated. Use 'Sys.setenv' instead. See help("Deprecated") Error in library(rsbml) : .First.lib failed for 'rsbml' Execution halted It looks like this package (or one of its dependent packages) has an unstated dependence on a standard package. All dependencies must be declared in DESCRIPTION. See the information on DESCRIPTION files in the chapter 'Creating R packages' of the 'Writing R Extensions' manual. * checking for unstated dependencies in R code ... WARNING Error: .First.lib failed for 'rsbml' Call sequence: 2: stop(gettextf(".First.lib failed for '%s'", libraryPkgName(package)), domain = NA) 1: library(package, lib.loc = lib.loc, character.only = TRUE, verbose = FALSE) Execution halted See the information on DESCRIPTION files in the chapter 'Creating R packages' of the 'Writing R Extensions' manual. * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking for CRLF line endings in C/C++/Fortran sources/headers ... OK * checking for portable compilation flags in Makevars ... OK * checking for portable use of $BLAS_LIBS ... OK * creating rsbml-Ex.R ... OK * checking examples ... WARNING Found the following significant warnings: Warning: 'Sys.putenv' is deprecated. Warning: 'Sys.putenv' is deprecated. Deprecated functions may be defunct as soon as of the next release of R. See ?Deprecated. * checking package vignettes in 'inst/doc' ... OK * creating rsbml-manual.tex ... OK * checking rsbml-manual.tex ... OK