* using log directory 'd:/Rcompile/CRANpkg/local/2.6/SoPhy.Rcheck' * using R version 2.6.2 RC (2008-02-04 r44320) * checking for file 'SoPhy/DESCRIPTION' ... OK * this is package 'SoPhy' version '1.0.32' * checking package name space information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking whether package 'SoPhy' can be installed ... OK * checking package directory ... OK * checking for portable file names ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the name space can be loaded with stated dependencies ... OK * checking for unstated dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... NOTE quader : : no visible binding for global variable '.p3d.range.dist' read.swms2d.table: no visible binding for global variable 'NumNP' read.swms2d.table: no visible binding for global variable 'NumEl' read.swms2d.table: no visible binding for global variable 'NumBP' read.swms2d.table: no visible binding for global variable 'NObs' read.swms2d.table: no visible binding for global variable 'hTab1' read.swms2d.table: no visible binding for global variable 'hTabN' read.swms2d.table: no visible binding for global variable 'NMat' read.swms2d.table: no visible binding for global variable 'AtmInF' read.swms2d.table: no visible binding for global variable 'dtMin' read.swms2d.table: no visible binding for global variable 'dtMax' read.swms2d.table: no visible binding for global variable 'DMul2' read.swms2d.table: no visible binding for global variable 'MPL' read.swms2d.table: no visible binding for global variable 'SeepF' read.swms2d.table: no visible binding for global variable 'DrainF' read.swms2d.table: no visible binding for global variable 'lChem' read.swms2d.table: no visible binding for global variable 'LUnit' read.swms2d.table: no visible binding for global variable 'TUnit' read.swms2d.table: no visible binding for global variable 'MUnit' read.swms2d.table: no visible binding for global variable 'Kat' read.swms2d.table: no visible binding for global variable 'MaxIt' read.swms2d.table: no visible binding for global variable 'TolTh' read.swms2d.table: no visible binding for global variable 'TolH' read.swms2d.table: no visible binding for global variable 'lWat' read.swms2d.table: no visible binding for global variable 'FreeD' read.swms2d.table: no visible binding for global variable 'NLay' sh.jch : sketches: no visible binding for global variable '.p3d.col' sh.jch : sketches: no visible global function definition for '.p3d.colfct' sh.jch : sketches: no visible binding for global variable '.p3d.sun' * checking Rd files ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking data for non-ASCII characters ... OK * checking line endings in C/C++/Fortran sources/headers ... OK * checking line endings in Makefiles ... OK * checking for portable compilation flags in Makevars ... OK * checking for portable use of $BLAS_LIBS ... OK * creating SoPhy-Ex.R ... OK * checking examples ... OK * checking tests ... OK * creating SoPhy-manual.tex ... OK * checking SoPhy-manual.tex ... OK