* using log directory 'd:/Rcompile/CRANpkg/local/2.6/assist.Rcheck'
* using R version 2.6.2 RC (2008-02-04 r44320)
* checking for file 'assist/DESCRIPTION' ... OK
* this is package 'assist' version '2.0'
* checking package name space information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'assist' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the name space can be loaded with stated dependencies ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... NOTE
hat.ssr: possible error in gdsidr(s = swk, q = qSum, y = y, family =
  ssr.obj$expand.call$family, vmu = ssr.obj$expand.call$spar, tol1 =
  ssr.obj$expand.call$control$tol, tol2 =
  ssr.obj$expand.call$control$tol.g, maxite =
  ssr.obj$expand.call$control$maxit.g, job =
  ssr.obj$expand.call$control$job, limnla = ssr.obj$expand.call$limnla,
  prec = ssr.obj$expand.call$control$prec): unused argument(s) (maxite
  = ssr.obj$expand.call$control$maxit.g)
plot.bCI: no visible global function definition for 'xyplot'
slm: no visible binding for global variable 'response'
snm: no visible global function definition for 'matDiag'
ssr: no visible binding for global variable 'response'
table2: no visible global function definition for 'is.category'
table2: no visible global function definition for 'which.na'
xyplot2: no visible global function definition for 'xyplot'
xyplot2 : <anonymous>: no visible global function definition for
  'strip.default'
xyplot2 : <anonymous>: no visible global function definition for
  'panel.xyplot'
xyplot2 : <anonymous>: no visible global function definition for
  'panel.superpose'
* checking Rd files ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... NOTE
S3 methods shown with full name in documentation object 'anova.ssr':
  anova.ssr

S3 methods shown with full name in documentation object 'deviance.ssr':
  deviance.ssr

S3 methods shown with full name in documentation object 'intervals.nnr':
  intervals.nnr

S3 methods shown with full name in documentation object 'intervals.slm':
  intervals.slm

S3 methods shown with full name in documentation object 'intervals.snm':
  intervals.snm

S3 methods shown with full name in documentation object 'intervals.snr':
  intervals.snr

S3 methods shown with full name in documentation object 'plot.bCI':
  plot.bCI

S3 methods shown with full name in documentation object 'plot.ssr':
  plot.ssr

S3 methods shown with full name in documentation object 'predict.slm':
  predict.slm

S3 methods shown with full name in documentation object 'predict.snm':
  predict.snm

S3 methods shown with full name in documentation object 'predict.snr':
  predict.snr

S3 methods shown with full name in documentation object 'predict.ssr':
  predict.ssr

S3 methods shown with full name in documentation object ' print.anova.ssr':
  print.anova.ssr

S3 methods shown with full name in documentation object 'print.nnr':
  print.nnr

S3 methods shown with full name in documentation object 'print.slm':
  print.slm

S3 methods shown with full name in documentation object 'print.snm':
  print.snm

S3 methods shown with full name in documentation object 'print.snr':
  print.snr

S3 methods shown with full name in documentation object ' print.ssr ':
  print.ssr

S3 methods shown with full name in documentation object 'print.summary.nnr':
  print.summary.nnr

S3 methods shown with full name in documentation object 'print.summary.slm':
  print.summary.slm

S3 methods shown with full name in documentation object 'print.summary.snm':
  print.summary.snm

S3 methods shown with full name in documentation object 'print.summary.snr':
  print.summary.snr

S3 methods shown with full name in documentation object 'print.summary.ssr':
  print.summary.ssr

S3 methods shown with full name in documentation object 'summary.nnr':
  summary.nnr

S3 methods shown with full name in documentation object 'summary.slm':
  summary.slm

S3 methods shown with full name in documentation object 'summary.snm':
  summary.snm

S3 methods shown with full name in documentation object 'summary.snr':
  summary.snr

S3 methods shown with full name in documentation object 'summary.ssr':
  summary.ssr

The \usage entries for S3 methods should use the \method markup and not
their full name.
See the chapter 'Writing R documentation files' in manual 'Writing R
Extensions'.
* checking data for non-ASCII characters ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking for portable use of $BLAS_LIBS ... OK
* creating assist-Ex.R ... OK
* checking examples ... OK
* creating assist-manual.tex ... OK
* checking assist-manual.tex ... OK