* using log directory 'd:/Rcompile/CRANpkg/local/2.6/empiricalBayes.Rcheck' * using R version 2.6.2 (2008-02-08) * checking for file 'empiricalBayes/DESCRIPTION' ... OK * looks like 'empiricalBayes' is a package bundle * this is bundle 'empiricalBayes' version '2.0' * checking package dependencies ... OK * checking if this is a source bundle ... OK * checking whether bundle 'empiricalBayes' can be installed ... OK * checking 'HighProbability' in bundle 'empiricalBayes' ** checking package directory ... OK ** checking for portable file names ... OK ** checking for file 'DESCRIPTION.in' ... OK ** checking DESCRIPTION meta-information ... OK ** checking top-level files ... OK ** checking index information ... OK ** checking package subdirectories ... OK ** checking R files for non-ASCII characters ... OK ** checking R files for syntax errors ... OK ** checking whether the package can be loaded ... OK ** checking whether the package can be loaded with stated dependencies ... OK ** checking for unstated dependencies in R code ... OK ** checking S3 generic/method consistency ... OK ** checking replacement functions ... OK ** checking foreign function calls ... OK ** checking R code for possible problems ... OK ** checking Rd files ... OK ** checking Rd cross-references ... OK ** checking for missing documentation entries ... OK ** checking for code/documentation mismatches ... OK ** checking Rd \usage sections ... OK ** creating HighProbability-Ex.R ... OK ** checking examples ... OK ** creating HighProbability-manual.tex ... OK ** checking HighProbability-manual.tex ... OK * checking 'localFDR' in bundle 'empiricalBayes' ** checking package directory ... OK ** checking for portable file names ... OK ** checking for file 'DESCRIPTION.in' ... OK ** checking DESCRIPTION meta-information ... OK ** checking top-level files ... OK ** checking index information ... OK ** checking package subdirectories ... OK ** checking R files for non-ASCII characters ... OK ** checking R files for syntax errors ... OK ** checking whether the package can be loaded ... OK ** checking whether the package can be loaded with stated dependencies ... OK ** checking for unstated dependencies in R code ... OK ** checking S3 generic/method consistency ... OK ** checking replacement functions ... OK ** checking foreign function calls ... OK ** checking R code for possible problems ... OK ** checking Rd files ... OK ** checking Rd cross-references ... OK ** checking for missing documentation entries ... OK ** checking for code/documentation mismatches ... OK ** checking Rd \usage sections ... OK ** creating localFDR-Ex.R ... OK ** checking examples ... OK ** creating localFDR-manual.tex ... OK ** checking localFDR-manual.tex ... OK