* using log directory 'd:/Rcompile/CRANpkg/local/2.6/gRcox.Rcheck' * using R version 2.6.0 (2007-10-03) * checking for file 'gRcox/DESCRIPTION' ... OK * this is package 'gRcox' version '0.1' * checking package dependencies ... OK * checking if this is a source package ... OK * checking whether package 'gRcox' can be installed ... OK * checking package directory ... OK * checking for portable file names ... OK * checking DESCRIPTION meta-information ... WARNING Unknown encoding with non-ASCII data Fields with non-ASCII values: Author Maintainer See the information on DESCRIPTION files in section 'Creating R packages' of the 'Writing R Extensions' manual. * checking top-level files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking for unstated dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... NOTE display.rcox: no visible global function definition for 'addEdge' findCanonicalRepresentation: no visible binding for '<<-' assignment to 'eccEdges' findCanonicalRepresentation: no visible binding for global variable 'eccEdges' rcorFitHYD: no visible binding for global variable 'm' testAddEdges: no visible binding for global variable 'DEVstat' Found possibly global 'T' or 'F' in the following functions: fitIPSedge fitNR * checking Rd files ... WARNING Rd files with unknown encoding: ModelChange.Rd ModelEdit.Rd ModelSelection.Rd ParameterComparison.Rd display.Rd gRcox.Rd internal.Rd mathmark.Rd rcox.Rd tr.Rd See the chapter 'Writing R documentation files' in manual 'Writing R Extensions'. * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking data for non-ASCII characters ... OK * checking line endings in C/C++/Fortran sources/headers ... OK * checking line endings in Makefiles ... WARNING Found the following Makefiles with CR or CRLF line endings: src/Makevars Some Unix makes require LF line endings. * checking for portable compilation flags in Makevars ... OK * checking for portable use of $BLAS_LIBS ... OK * creating gRcox-Ex.R ... OK * checking examples ... OK * creating gRcox-manual.tex ... OK * checking gRcox-manual.tex ... OK