* using log directory 'd:/Rcompile/CRANpkg/local/2.6/mclust.Rcheck' * using R version 2.6.2 (2008-02-08) * checking for file 'mclust/DESCRIPTION' ... OK * this is package 'mclust' version '3.1-5' * checking package dependencies ... OK * checking if this is a source package ... OK * checking whether package 'mclust' can be installed ... OK * checking package directory ... OK * checking for portable file names ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking for unstated dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... NOTE cdensEEE: no visible binding for global variable 'K' cdensEEI: no visible binding for global variable 'K' cdensEEV: no visible binding for global variable 'K' cdensEII: no visible binding for global variable 'K' cdensEVI: no visible binding for global variable 'K' cdensVEI: no visible binding for global variable 'K' cdensVEV: no visible binding for global variable 'K' cdensVII: no visible binding for global variable 'K' cdensVVI: no visible binding for global variable 'K' cdensVVV: no visible binding for global variable 'K' classError : q: no visible global function definition for 'name' mstepEEE: no visible binding for global variable 'control' mstepVEI: no visible binding for global variable 'Vinv' mstepVEV: no visible binding for global variable 'K' mstepVII: no visible global function definition for 're' mstepVVI: no visible global function definition for 're' mstepVVV: no visible binding for global variable 'control' plot.mclustBIC: no visible global function definition for 'bicFill' plot.mclustBIC: no visible binding for global variable 'd' plot.mclustDAtrain: no visible binding for global variable 'n' print.mclustBIC: no visible global function definition for 'bicFill' summaryMclustBICn: no visible binding for global variable 'datatset' * checking Rd files ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... NOTE S3 methods shown with full name in documentation object 'plot.Mclust': plot.Mclust S3 methods shown with full name in documentation object 'plot.mclustBIC': plot.mclustBIC S3 methods shown with full name in documentation object 'plot.mclustDA': plot.mclustDA S3 methods shown with full name in documentation object 'plot.mclustDAtrain': plot.mclustDAtrain The \usage entries for S3 methods should use the \method markup and not their full name. See the chapter 'Writing R documentation files' in manual 'Writing R Extensions'. * checking data for non-ASCII characters ... OK * checking line endings in C/C++/Fortran sources/headers ... OK * checking line endings in Makefiles ... OK * checking for portable compilation flags in Makevars ... OK * checking for portable use of $BLAS_LIBS ... OK * creating mclust-Ex.R ... OK * checking examples ... OK * creating mclust-manual.tex ... OK * checking mclust-manual.tex ... OK