* using log directory 'd:/Rcompile/CRANpkg/local/2.6/minet.Rcheck'
* using R version 2.6.2 (2008-02-08)
* checking for file 'minet/DESCRIPTION' ... OK
* this is package 'minet' version '1.1.5'
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'minet' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... NOTE
show.pr: no visible global function definition for 'dev.new'
show.roc: no visible global function definition for 'dev.new'
* checking Rd files ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking data for non-ASCII characters ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking for portable use of $BLAS_LIBS ... OK
* creating minet-Ex.R ... OK
* checking examples ... ERROR
Running examples in 'minet-Ex.R' failed.
The error most likely occurred in:

> ### * vis.res
> 
> flush(stderr()); flush(stdout())
> 
> ### Name: vis.res
> ### Title: Visualize Results
> ### Aliases: vis.res pr rates fscores show.pr show.roc
> ### Keywords: misc
> 
> ### ** Examples
> 
> data(syn.data)
> data(syn.net)
> # Inference
> mr <- minet( syn.data, method="mrnet", estimator="mi.empirical" )
> ar <- minet( syn.data, method="aracne", estimator="mi.empirical" )
> clr<- minet( syn.data, method="clr", estimator="mi.empirical" )
> # Validation
> mr.tbl <- validate(mr,syn.net)
> ar.tbl <- validate(ar,syn.net)
> clr.tbl<- validate(clr,syn.net)
> # Plot PR-Curves
> max(fscores(mr.tbl))
[1] 0.4603175
> dev <- show.pr(mr.tbl, col="green", type="b")
Error in show.pr(mr.tbl, col = "green", type = "b") : 
  could not find function "dev.new"
Execution halted