* using log directory 'd:/Rcompile/CRANpkg/local/2.6/sna.Rcheck' * using R version 2.6.2 RC (2008-02-04 r44320) * checking for file 'sna/DESCRIPTION' ... OK * this is package 'sna' version '1.5' * checking package dependencies ... OK * checking if this is a source package ... OK * checking whether package 'sna' can be installed ... OK * checking package directory ... OK * checking for portable file names ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking for unstated dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... NOTE consensus: no visible global function definition for 'error' kcycle.census: no visible binding for global variable 'cycle.census' kpath.census: no visible binding for global variable 'path.census' nacf: no visible binding for global variable 'nat' pstar: no visible binding for global variable 'gmode' Found possibly global 'T' or 'F' in the following function: read.dot * checking Rd files ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... NOTE S3 methods shown with full name in documentation object 'plot.bbnam': plot.bbnam S3 methods shown with full name in documentation object 'plot.blockmodel': plot.blockmodel S3 methods shown with full name in documentation object 'plot.cugtest': plot.cugtest S3 methods shown with full name in documentation object 'plot.equiv.clust': plot.equiv.clust S3 methods shown with full name in documentation object 'plot.lnam': plot.lnam S3 methods shown with full name in documentation object 'plot.qaptest': plot.qaptest S3 methods shown with full name in documentation object 'plot.sociomatrix': plot.sociomatrix S3 methods shown with full name in documentation object 'print.bayes.factor': print.bayes.factor S3 methods shown with full name in documentation object 'print.bbnam': print.bbnam S3 methods shown with full name in documentation object 'print.blockmodel': print.blockmodel S3 methods shown with full name in documentation object 'print.cugtest': print.cugtest S3 methods shown with full name in documentation object 'print.lnam': print.lnam S3 methods shown with full name in documentation object 'print.netcancor': print.netcancor S3 methods shown with full name in documentation object 'print.netlm': print.netlm S3 methods shown with full name in documentation object 'print.netlogit': print.netlogit S3 methods shown with full name in documentation object 'print.qaptest': print.qaptest S3 methods shown with full name in documentation object 'print.summary.bayes.factor': print.summary.bayes.factor S3 methods shown with full name in documentation object 'print.summary.bbnam': print.summary.bbnam S3 methods shown with full name in documentation object 'print.summary.blockmodel': print.summary.blockmodel S3 methods shown with full name in documentation object 'print.summary.cugtest': print.summary.cugtest S3 methods shown with full name in documentation object 'print.summary.lnam': print.summary.lnam S3 methods shown with full name in documentation object 'print.summary.netcancor': print.summary.netcancor S3 methods shown with full name in documentation object 'print.summary.netlm': print.summary.netlm S3 methods shown with full name in documentation object 'print.summary.netlogit': print.summary.netlogit S3 methods shown with full name in documentation object 'print.summary.qaptest': print.summary.qaptest S3 methods shown with full name in documentation object 'summary.bayes.factor': summary.bayes.factor S3 methods shown with full name in documentation object 'summary.bbnam': summary.bbnam S3 methods shown with full name in documentation object 'summary.blockmodel': summary.blockmodel S3 methods shown with full name in documentation object 'summary.cugtest': summary.cugtest S3 methods shown with full name in documentation object 'summary.lnam': summary.lnam S3 methods shown with full name in documentation object 'summary.netcancor': summary.netcancor S3 methods shown with full name in documentation object 'summary.netlm': summary.netlm S3 methods shown with full name in documentation object 'summary.netlogit': summary.netlogit S3 methods shown with full name in documentation object 'summary.qaptest': summary.qaptest The \usage entries for S3 methods should use the \method markup and not their full name. See the chapter 'Writing R documentation files' in manual 'Writing R Extensions'. * checking line endings in C/C++/Fortran sources/headers ... OK * checking line endings in Makefiles ... OK * checking for portable use of $BLAS_LIBS ... OK * creating sna-Ex.R ... OK * checking examples ... OK * creating sna-manual.tex ... OK * checking sna-manual.tex ... OK