* using log directory 'd:/Rcompile/CRANpkg/local/2.6/spectralGP.Rcheck'
* using R version 2.6.2 RC (2008-02-04 r44320)
* checking for file 'spectralGP/DESCRIPTION' ... OK
* this is package 'spectralGP' version '1.1'
* checking package name space information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'spectralGP' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the name space can be loaded with stated dependencies ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... NOTE
S3 methods shown with full name in documentation object 'Gibbs.sample.coeff.gp':
  Gibbs.sample.coeff.gp

S3 methods shown with full name in documentation object 'Hastings.coeff.gp':
  Hastings.coeff.gp

S3 methods shown with full name in documentation object 'add.blocks.gp':
  add.blocks.gp

S3 methods shown with full name in documentation object 'calc.variances.gp':
  calc.variances.gp

S3 methods shown with full name in documentation object 'change.param.gp':
  change.param.gp

S3 methods shown with full name in documentation object 'copy.gp':
  copy.gp

S3 methods shown with full name in documentation object 'expand.gpgrid.gp':
  expand.gpgrid.gp

S3 methods shown with full name in documentation object 'getgrid.gp':
  getgrid.gp

S3 methods shown with full name in documentation object 'lines.gp':
  lines.gp

S3 methods shown with full name in documentation object 'logdensity.gp':
  logdensity.gp

S3 methods shown with full name in documentation object 'names.gp':
  names.gp

S3 methods shown with full name in documentation object 'plot.gp':
  plot.gp

S3 methods shown with full name in documentation object 'points.gp':
  points.gp

S3 methods shown with full name in documentation object 'predict.gp':
  predict.gp

S3 methods shown with full name in documentation object 'propose.coeff.gp':
  propose.coeff.gp

S3 methods shown with full name in documentation object 'simulate.gp':
  simulate.gp

S3 methods shown with full name in documentation object 'updateprocess.gp':
  updateprocess.gp

S3 methods shown with full name in documentation object 'zero.coeff.gp':
  zero.coeff.gp

The \usage entries for S3 methods should use the \method markup and not
their full name.
See the chapter 'Writing R documentation files' in manual 'Writing R
Extensions'.
* creating spectralGP-Ex.R ... OK
* checking examples ... OK
* creating spectralGP-manual.tex ... OK
* checking spectralGP-manual.tex ... OK