* using log directory 'd:/Rcompile/CRANpkg/local/2.7/BaM.Rcheck' * using R version 2.7.2 (2008-08-25) * using session charset: ISO8859-1 * checking for file 'BaM/DESCRIPTION' ... OK * this is package 'BaM' version '0.93' * checking package dependencies ... OK * checking if this is a source package ... OK * checking whether package 'BaM' can be installed ... OK * checking package directory ... OK * checking for portable file names ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking for unstated dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... NOTE biv.norm.post: possible error in rwishart(alpha + n, SqrtSigma = chol(solve(Wp.inv))): unused argument(s) (SqrtSigma = chol(solve(Wp.inv))) biv.norm.post: no visible global function definition for 'rmultinorm' plot.walk.MH: possible error in plot(walk.mat[1, 1], walk.mat[1, 2], type = "n", xlim = round(range(walk.mat[, 1]) * 1.2), ylim = round(range(walk.mat[, 2]) * 1.2), xlab = "", ylab = ""): unused argument(s) (walk.mat[1, 2], type = "n", xlim = round(range(walk.mat[, 1]) * 1.2), ylim = round(range(walk.mat[, 2]) * 1.2), xlab = "", ylab = "") romney: possible error in plot(ruler, beta.prior, ylim = c(-0.7, 9.5), xaxt = "n", yaxt = "n", xlab = "", ylab = "", pch = "."): unused argument(s) (beta.prior, ylim = c(-0.7, 9.5), xaxt = "n", yaxt = "n", xlab = "", ylab = "", pch = ".") sir: no visible binding for global variable 'normal.posterior.ll' sir: no visible binding for global variable 't.posterior.ll' walk.G: possible error in plot(walk.mat[1, X], walk.mat[1, Y], type = "n", xlim = range(walk.mat[, X]), ylim = range(walk.mat[, Y]), xlab = "", ylab = ""): unused argument(s) (walk.mat[1, Y], type = "n", xlim = range(walk.mat[, X]), ylim = range(walk.mat[, Y]), xlab = "", ylab = "") Found possibly global 'T' or 'F' in the following function: sir * checking Rd files ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking data for non-ASCII characters ... OK * creating BaM-Ex.R ... OK * checking examples ... ERROR Running examples in 'BaM-Ex.R' failed.