* using log directory 'd:/Rcompile/CRANpkg/local/2.7/connectedness.Rcheck' * using R version 2.7.2 RC (2008-08-18 r46382) * using session charset: ISO8859-1 * checking for file 'connectedness/DESCRIPTION' ... OK * this is package 'connectedness' version '0.2.2' * checking package name space information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking whether package 'connectedness' can be installed ... OK * checking package directory ... OK * checking for portable file names ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the name space can be loaded with stated dependencies ... OK * checking for unstated dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... NOTE S3 methods shown with full name in documentation object 'plot.connectedness': plot.connectedness S3 methods shown with full name in documentation object 'subset.connectedness': subset.connectedness The \usage entries for S3 methods should use the \method markup and not their full name. See the chapter 'Writing R documentation files' in manual 'Writing R Extensions'. * checking data for non-ASCII characters ... OK * creating connectedness-Ex.R ... OK * checking examples ... OK * checking tests ... OK * checking package vignettes in 'inst/doc' ... OK * creating connectedness-manual.tex ... OK * checking connectedness-manual.tex using pdflatex ... OK