* using log directory 'd:/Rcompile/CRANpkg/local/2.7/hydrosanity.Rcheck' * using R version 2.7.2 RC (2008-08-18 r46382) * using session charset: ISO8859-1 * checking for file 'hydrosanity/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'hydrosanity' version '0.8.76' * checking package name space information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking whether package 'hydrosanity' can be installed ... OK * checking package directory ... OK * checking for portable file names ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the name space can be loaded with stated dependencies ... OK * checking for unstated dependencies in R code ... WARNING (Rterm.exe:1692): GLib-WARNING **: g_main_context_prepare(): main loop already active in another thread (Rterm.exe:1692): GLib-WARNING **: g_main_context_prepare(): main loop already active in another thread (Rterm.exe:1692): GLib-WARNING **: g_main_context_prepare(): main loop already active in another thread (Rterm.exe:1692): GLib-WARNING **: g_main_context_prepare(): main loop already active in another thread (Rterm.exe:1692): GLib-WARNING **: g_main_context_prepare(): main loop already active in another thread (Rterm.exe:1692): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:1692): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:1692): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:1692): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:1692): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:1692): GLib-WARNING **: g_main_context_prepare(): main loop already active in another thread (Rterm.exe:1692): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:1692): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:1692): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:1692): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:1692): GLib-WARNING **: g_main_context_prepare(): main loop already active in another thread (Rterm.exe:1692): GLib-WARNING **: g_main_context_prepare(): main loop already active in another thread (Rterm.exe:1692): GLib-WARNING **: g_main_context_prepare(): main loop already active in another thread (Rterm.exe:1692): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:1692): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:1692): GLib-WARNING **: g_main_context_prepare(): main loop already active in another thread (Rterm.exe:1692): GLib-WARNING **: g_main_context_prepare(): main loop already active in another thread (Rterm.exe:1692): GLib-WARNING **: g_main_context_prepare(): main loop already active in another thread (Rterm.exe:1692): GLib-WARNING **: g_main_context_prepare(): main loop already active in another thread (Rterm.exe:1692): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:1692): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:1692): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:1692): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:1692): GLib-WARNING **: g_main_context_prepare(): main loop already active in another thread (Rterm.exe:1692): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:1692): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:1692): GLib-WARNING **: g_main_context_prepare(): main loop already active in another thread (Rterm.exe:1692): GLib-WARNING **: g_main_context_prepare(): main loop already active in another thread (Rterm.exe:1692): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:1692): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:1692): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:1692): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:1692): GLib-WARNING **: g_main_context_prepare(): main loop already active in another thread (Rterm.exe:1692): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:1692): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:1692): GLib-WARNING **: g_main_context_prepare(): main loop already active in another thread (Rterm.exe:1692): GLib-WARNING **: g_main_context_prepare(): main loop already active in another thread (Rterm.exe:1692): GLib-WARNING **: g_main_context_prepare(): main loop already active in another thread (Rterm.exe:1692): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:1692): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:1692): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:1692): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:1692): GLib-WARNING **: g_main_context_prepare(): main loop already active in another thread (Rterm.exe:1692): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:1692): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:1692): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:1692): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:1692): GLib-WARNING **: g_main_context_prepare(): main loop already active in another thread (Rterm.exe:1692): GLib-WARNING **: g_main_context_prepare(): main loop already active in another thread (Rterm.exe:1692): GLib-WARNING **: g_main_context_prepare(): main loop already active in another thread (Rterm.exe:1692): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:1692): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:1692): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:1692): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:1692): GLib-WARNING **: g_main_context_prepare(): main loop already active in another thread (Rterm.exe:1692): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:1692): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:1692): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:1692): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:1692): GLib-WARNING **: g_main_context_prepare(): main loop already active in another thread (Rterm.exe:1692): GLib-WARNING **: g_main_context_prepare(): main loop already active in another thread (Rterm.exe:1692): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:1692): GLib-WARNING **: g_main_context_prepare(): main loop already active in another thread (Rterm.exe:1692): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:1692): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:1692): GLib-WARNING **: g_main_context_prepare(): main loop already active in another thread (Rterm.exe:1692): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:1692): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:1692): GLib-WARNING **: g_main_context_prepare(): main loop already active in another thread (Rterm.exe:1692): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:1692): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:1692): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:1692): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:1692): GLib-WARNING **: g_main_context_prepare(): main loop already active in another thread (Rterm.exe:1692): GLib-WARNING **: g_main_context_prepare(): main loop already active in another thread (Rterm.exe:1692): GLib-WARNING **: g_main_context_prepare(): main loop already active in another thread (Rterm.exe:1692): GLib-WARNING **: g_main_context_prepare(): main loop already active in another thread (Rterm.exe:1692): GLib-WARNING **: g_main_context_prepare(): main loop already active in another thread (Rterm.exe:1692): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:1692): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:1692): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:1692): GLib-WARNING **: g_main_context_prepare(): main loop already active in another thread (Rterm.exe:1692): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:1692): GLib-WARNING **: g_main_context_prepare(): main loop already active in another thread (Rterm.exe:1692): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:1692): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:1692): GLib-WARNING **: g_main_context_prepare(): main loop already active in another thread (Rterm.exe:1692): GLib-WARNING **: g_main_context_prepare(): main loop already active in another thread (Rterm.exe:1692): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:1692): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:1692): GLib-WARNING **: g_main_context_prepare(): main loop already active in another thread (Rterm.exe:1692): GLib-WARNING **: g_main_context_prepare(): main loop already active in another thread (Rterm.exe:1692): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:1692): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. options(warn=1,warnEscapes=FALSE);tools:::.check_packages_used(package="hydrosanity") See the information on DESCRIPTION files in the chapter 'Creating R packages' of the 'Writing R Extensions' manual. * checking S3 generic/method consistency ... WARNING (Rterm.exe:3856): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_prepare(): main loop already active in another thread (Rterm.exe:3856): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_prepare(): main loop already active in another thread (Rterm.exe:3856): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_prepare(): main loop already active in another thread (Rterm.exe:3856): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_prepare(): main loop already active in another thread (Rterm.exe:3856): GLib-WARNING **: g_main_context_prepare(): main loop already active in another thread (Rterm.exe:3856): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_prepare(): main loop already active in another thread (Rterm.exe:3856): GLib-WARNING **: g_main_context_prepare(): main loop already active in another thread (Rterm.exe:3856): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_prepare(): main loop already active in another thread (Rterm.exe:3856): GLib-WARNING **: g_main_context_prepare(): main loop already active in another thread (Rterm.exe:3856): GLib-WARNING **: g_main_context_prepare(): main loop already active in another thread (Rterm.exe:3856): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_prepare(): main loop already active in another thread (Rterm.exe:3856): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_prepare(): main loop already active in another thread (Rterm.exe:3856): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_prepare(): main loop already active in another thread (Rterm.exe:3856): GLib-WARNING **: g_main_context_prepare(): main loop already active in another thread (Rterm.exe:3856): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_prepare(): main loop already active in another thread (Rterm.exe:3856): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_prepare(): main loop already active in another thread (Rterm.exe:3856): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_prepare(): main loop already active in another thread (Rterm.exe:3856): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_prepare(): main loop already active in another thread (Rterm.exe:3856): GLib-WARNING **: g_main_context_prepare(): main loop already active in another thread (Rterm.exe:3856): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_prepare(): main loop already active in another thread (Rterm.exe:3856): GLib-WARNING **: g_main_context_prepare(): main loop already active in another thread (Rterm.exe:3856): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_prepare(): main loop already active in another thread (Rterm.exe:3856): GLib-WARNING **: g_main_context_prepare(): main loop already active in another thread (Rterm.exe:3856): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_prepare(): main loop already active in another thread (Rterm.exe:3856): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_prepare(): main loop already active in another thread (Rterm.exe:3856): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:3856): GLib-WARNING **: g_main_context_prepare(): main loop already active in another thread (Rterm.exe:3856): GLib-WARNING **: g_main_context_prepare(): main loop already active in another thread (Rterm.exe:3856): GLib-WARNING **: g_main_context_prepare(): main loop already active in another thread tools::checkS3methods(package = "hydrosanity") See section 'Generic functions and methods' of the 'Writing R Extensions' manual. * checking replacement functions ... WARNING (Rterm.exe:748): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:748): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:748): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:748): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:748): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:748): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:748): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:748): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:748): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:748): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:748): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:748): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:748): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:748): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:748): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:748): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:748): GLib-WARNING **: g_main_context_prepare(): main loop already active in another thread (Rterm.exe:748): GLib-WARNING **: g_main_context_prepare(): main loop already active in another thread (Rterm.exe:748): GLib-WARNING **: g_main_context_prepare(): main loop already active in another thread (Rterm.exe:748): GLib-WARNING **: g_main_context_prepare(): main loop already active in another thread tools::checkReplaceFuns(package = "hydrosanity") In R, the argument of a replacement function which corresponds to the right hand side must be named 'value'. * checking foreign function calls ... WARNING (Rterm.exe:2900): GLib-WARNING **: g_main_context_prepare(): main loop already active in another thread (Rterm.exe:2900): GLib-WARNING **: g_main_context_prepare(): main loop already active in another thread (Rterm.exe:2900): GLib-WARNING **: g_main_context_prepare(): main loop already active in another thread (Rterm.exe:2900): GLib-WARNING **: g_main_context_prepare(): main loop already active in another thread (Rterm.exe:2900): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:2900): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:2900): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:2900): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:2900): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:2900): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:2900): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:2900): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:2900): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:2900): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:2900): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:2900): GLib-WARNING **: g_main_context_prepare(): main loop already active in another thread (Rterm.exe:2900): GLib-WARNING **: g_main_context_prepare(): main loop already active in another thread (Rterm.exe:2900): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:2900): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:2900): GLib-WARNING **: g_main_context_prepare(): main loop already active in another thread (Rterm.exe:2900): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:2900): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:2900): GLib-WARNING **: g_main_context_prepare(): main loop already active in another thread (Rterm.exe:2900): GLib-WARNING **: g_main_context_prepare(): main loop already active in another thread (Rterm.exe:2900): GLib-WARNING **: g_main_context_prepare(): main loop already active in another thread (Rterm.exe:2900): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:2900): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:2900): GLib-WARNING **: g_main_context_prepare(): main loop already active in another thread (Rterm.exe:2900): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:2900): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:2900): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:2900): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:2900): GLib-WARNING **: g_main_context_prepare(): main loop already active in another thread (Rterm.exe:2900): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:2900): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:2900): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:2900): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:2900): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:2900): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:2900): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:2900): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:2900): GLib-WARNING **: g_main_context_prepare(): main loop already active in another thread (Rterm.exe:2900): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:2900): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:2900): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:2900): GLib-WARNING **: g_main_context_prepare(): main loop already active in another thread (Rterm.exe:2900): GLib-WARNING **: g_main_context_prepare(): main loop already active in another thread (Rterm.exe:2900): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:2900): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:2900): GLib-WARNING **: g_main_context_prepare(): main loop already active in another thread (Rterm.exe:2900): GLib-WARNING **: g_main_context_prepare(): main loop already active in another thread (Rterm.exe:2900): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:2900): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. tools::checkFF(package = "hydrosanity") See the chapter 'System and foreign language interfaces' of the 'Writing R Extensions' manual. * checking R code for possible problems ... NOTE (Rterm.exe:3624): GLib-WARNING **: g_main_context_prepare(): main loop already active in another thread (Rterm.exe:3624): GLib-WARNING **: g_main_context_prepare(): main loop already active in another thread (Rterm.exe:3624): GLib-WARNING **: g_main_context_prepare(): main loop already active in another thread (Rterm.exe:3624): GLib-WARNING **: g_main_context_prepare(): main loop already active in another thread (Rterm.exe:3624): GLib-WARNING **: g_main_context_prepare(): main loop already active in another thread (Rterm.exe:3624): GLib-WARNING **: g_main_context_prepare(): main loop already active in another thread (Rterm.exe:3624): GLib-WARNING **: g_main_context_prepare(): main loop already active in another thread (Rterm.exe:3624): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:3624): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:3624): GLib-WARNING **: g_main_context_prepare(): main loop already active in another thread (Rterm.exe:3624): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:3624): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:3624): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:3624): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:3624): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:3624): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:3624): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:3624): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:3624): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:3624): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:3624): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:3624): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:3624): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:3624): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:3624): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:3624): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:3624): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:3624): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:3624): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:3624): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:3624): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:3624): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:3624): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:3624): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:3624): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:3624): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:3624): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:3624): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:3624): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:3624): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:3624): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:3624): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:3624): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:3624): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:3624): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:3624): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:3624): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:3624): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:3624): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:3624): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:3624): GLib-WARNING **: g_main_context_prepare(): main loop already active in another thread (Rterm.exe:3624): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:3624): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. tools:::.check_code_usage_in_package(package = "hydrosanity") .hs_layers_event: no visible global function definition for 'plotAndPlayGetCurrState' .hs_layers_event: no visible global function definition for 'plotAndPlayGetToolbar' .hs_layers_event: no visible binding for global variable 'add.cities' .hs_layers_event: no visible global function definition for 'plotAndPlaySetCurrState' .hs_layers_event: no visible global function definition for 'plotAndPlayUpdate' .hs_map_setregion_event: no visible global function definition for 'plotAndPlayGetCurrState' .hs_map_setregion_event: no visible global function definition for 'plotAndPlayGetToolbar' .hs_on_corr_calculate_contiguous_button_clicked: no visible binding for global variable 'hsp' .hs_on_corr_ccfplot_button_clicked: no visible binding for global variable 'hsp' .hs_on_corr_relationplot_button_clicked: no visible binding for global variable 'hsp' .hs_on_explore_cdf_button_clicked: no visible binding for global variable 'hsp' .hs_on_explore_seasonal_button_clicked: no visible binding for global variable 'hsp' .hs_on_explore_timeseries_button_clicked: no visible binding for global variable 'hsp' .hs_on_export_button_clicked: no visible binding for global variable 'hsp' .hs_on_import_file_button_clicked: no visible binding for global variable 'hsp' .hs_on_import_makefactor_button_clicked: no visible binding for global variable 'tmp.factor' .hs_on_import_summary_treeview_role_edited: no visible binding for global variable 'hsp' .hs_on_import_viewtable_button_clicked: no visible binding for global variable 'hsp' .hs_on_import_viewtable_button_clicked: no visible binding for '<<-' assignment to 'hsp' .hs_on_impute_calculate_gaps_button_clicked: no visible binding for global variable 'hsp' .hs_on_impute_missing_button_clicked: no visible binding for global variable 'hsp' .hs_on_impute_missingatrandom_button_clicked: no visible binding for global variable 'hsp' .hs_on_impute_view_error_scatter_button_clicked: no visible binding for global variable 'hsp' .hs_on_menu_quit_activate: no visible binding for global variable 'hsp' .hs_on_menu_quit_activate: no visible binding for global variable 'win' .hs_on_menu_quit_activate: no visible binding for global variable 'GUI' .hs_on_multivar_lagseries_button_clicked: no visible binding for global variable 'hsp' .hs_on_multivar_relationplot_button_clicked: no visible binding for global variable 'hsp' .hs_on_rain_view_grids_button_clicked : : no visible binding for global variable 'hsp' .hs_on_rain_view_grids_button_clicked: no visible binding for global variable 'hsp' .hs_on_rain_view_mosaic_button_clicked: no visible binding for global variable 'hsp' .hs_on_rain_view_surface_button_clicked: no visible binding for global variable 'hsp' .hs_on_rain_view_surface_button_clicked : : no visible binding for global variable 'hsp' .hs_on_scope_import_button_clicked: no visible binding for global variable 'tmp.sites' .hs_on_scope_viewdbsitemap_button_clicked : : no visible binding for global variable 'hsp' .hs_on_scope_viewdbsitemap_button_clicked: no visible binding for global variable 'hsp' .hs_on_scope_viewdbsitemap_button_clicked: no visible binding for global variable 'tmp.sites' .hs_on_scope_viewdbtimeline_button_clicked: no visible binding for global variable 'hsp' .hs_on_scope_viewdbtimeline_button_clicked: no visible binding for global variable 'tmp.sites' .hs_on_scope_viewsitemap_button_clicked: no visible binding for global variable 'hsp' .hs_on_scope_viewsitemap_button_clicked : : no visible binding for global variable 'hsp' .hs_time_centre_event: no visible global function definition for 'plotAndPlayGetCurrState' .hs_time_centre_event: no visible global function definition for 'plotAndPlayGetToolbar' .hs_time_centre_event: no visible global function definition for 'plotAndPlayMakePrompt' .hs_time_centre_event: no visible global function definition for 'plotAndPlayUnmakePrompt' .hs_time_centre_event: no visible global function definition for 'plotAndPlaySetPrompt' .hs_time_centre_event: no visible global function definition for 'plotAndPlaySetCurrState' .hs_time_centre_event: no visible global function definition for 'plotAndPlayUpdate' .hs_time_logscale_event: no visible global function definition for 'plotAndPlayGetCurrState' .hs_time_logscale_event: no visible global function definition for 'plotAndPlayGetToolbar' .hs_time_logscale_event: no visible global function definition for 'plotAndPlaySetCurrState' .hs_time_logscale_event: no visible global function definition for 'plotAndPlayUpdate' .hs_time_setperiod_event: no visible global function definition for 'plotAndPlayGetCurrState' .hs_time_setperiod_event: no visible global function definition for 'plotAndPlayGetToolbar' .hs_time_zoomin_event: no visible global function definition for 'plotAndPlayGetCurrState' .hs_time_zoomin_event: no visible global function definition for 'plotAndPlayGetToolbar' .hs_time_zoomin_event: no visible global function definition for 'plotAndPlayMakePrompt' .hs_time_zoomin_event: no visible global function definition for 'plotAndPlayUnmakePrompt' .hs_time_zoomin_event: no visible global function definition for 'plotAndPlaySetPrompt' .hs_time_zoomin_event: no visible global function definition for 'plotAndPlaySetCurrState' .hs_time_zoomin_event: no visible global function definition for 'plotAndPlayUpdate' .hs_time_zoomout_event: no visible global function definition for 'plotAndPlayGetCurrState' .hs_time_zoomout_event: no visible global function definition for 'plotAndPlayGetToolbar' .hs_time_zoomout_event: no visible global function definition for 'plotAndPlaySetCurrState' .hs_time_zoomout_event: no visible global function definition for 'plotAndPlayUpdate' datasetModificationUpdate: no visible binding for '<<-' assignment to 'hsp' datasetModificationUpdate: no visible binding for global variable 'hsp' iconViewSetSelection: no visible binding for global variable 'hsp' openProject: no visible binding for '<<-' assignment to 'hsp' openProject: no visible binding for global variable 'hsp' panel.cities: no visible binding for global variable 'world.cities' regionModificationUpdate: no visible binding for '<<-' assignment to 'hsp' regionModificationUpdate: no visible binding for global variable 'hsp' saveProject: no visible binding for global variable 'hsp' saveProject: no visible binding for '<<-' assignment to 'hsp' setupIconView: no visible binding for global variable 'hsp' timeperiodModificationUpdate: no visible binding for '<<-' assignment to 'hsp' timeperiodModificationUpdate: no visible binding for global variable 'hsp' updateImportPage: no visible binding for global variable 'hsp' updateMultivarPage: no visible binding for global variable 'hsp' updateSummaryPage: no visible binding for global variable 'hsp' updateTimePeriodPage: no visible binding for global variable 'hsp' * checking Rd files ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... WARNING (Rterm.exe:3952): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:3952): GLib-WARNING **: g_main_context_prepare(): main loop already active in another thread (Rterm.exe:3952): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:3952): GLib-WARNING **: g_main_context_prepare(): main loop already active in another thread (Rterm.exe:3952): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:3952): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:3952): GLib-WARNING **: g_main_context_prepare(): main loop already active in another thread (Rterm.exe:3952): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:3952): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:3952): GLib-WARNING **: g_main_context_prepare(): main loop already active in another thread (Rterm.exe:3952): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:3952): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:3952): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:3952): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:3952): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:3952): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:3952): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:3952): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:3952): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:3952): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:3952): GLib-WARNING **: g_main_context_prepare(): main loop already active in another thread (Rterm.exe:3952): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:3952): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:3952): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:3952): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:3952): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:3952): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:3952): GLib-WARNING **: g_main_context_prepare(): main loop already active in another thread (Rterm.exe:3952): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:3952): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:3952): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:3952): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:3952): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:3952): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. tools::undoc(package = "hydrosanity") All user-level objects in a package should have documentation entries. See the chapter 'Writing R documentation files' in manual 'Writing R Extensions'. * checking for code/documentation mismatches ... WARNING (Rterm.exe:1148): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:1148): GLib-WARNING **: g_main_context_prepare(): main loop already active in another thread (Rterm.exe:1148): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:1148): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:1148): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:1148): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:1148): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:1148): GLib-WARNING **: g_main_context_prepare(): main loop already active in another thread (Rterm.exe:1148): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:1148): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:1148): GLib-WARNING **: g_main_context_prepare(): main loop already active in another thread tools::codoc(package = "hydrosanity") (Rterm.exe:1872): GLib-WARNING **: g_main_context_prepare(): main loop already active in another thread (Rterm.exe:1872): GLib-WARNING **: g_main_context_prepare(): main loop already active in another thread (Rterm.exe:1872): GLib-WARNING **: g_main_context_prepare(): main loop already active in another thread (Rterm.exe:1872): GLib-WARNING **: g_main_context_prepare(): main loop already active in another thread (Rterm.exe:1872): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:1872): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:1872): GLib-WARNING **: g_main_context_prepare(): main loop already active in another thread (Rterm.exe:1872): GLib-WARNING **: g_main_context_prepare(): main loop already active in another thread (Rterm.exe:1872): GLib-WARNING **: g_main_context_prepare(): main loop already active in another thread (Rterm.exe:1872): GLib-WARNING **: g_main_context_prepare(): main loop already active in another thread (Rterm.exe:1872): GLib-WARNING **: g_main_context_prepare(): main loop already active in another thread (Rterm.exe:1872): GLib-WARNING **: g_main_context_prepare(): main loop already active in another thread (Rterm.exe:1872): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:1872): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. tools::codocData(package = "hydrosanity") (Rterm.exe:3544): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:3544): GLib-WARNING **: g_main_context_prepare(): main loop already active in another thread (Rterm.exe:3544): GLib-WARNING **: g_main_context_prepare(): main loop already active in another thread (Rterm.exe:3544): GLib-WARNING **: g_main_context_prepare(): main loop already active in another thread (Rterm.exe:3544): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:3544): GLib-WARNING **: g_main_context_prepare(): main loop already active in another thread (Rterm.exe:3544): GLib-WARNING **: g_main_context_prepare(): main loop already active in another thread (Rterm.exe:3544): GLib-WARNING **: g_main_context_prepare(): main loop already active in another thread (Rterm.exe:3544): GLib-WARNING **: g_main_context_prepare(): main loop already active in another thread (Rterm.exe:3544): GLib-WARNING **: g_main_context_prepare(): main loop already active in another thread (Rterm.exe:3544): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:3544): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:3544): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:3544): GLib-WARNING **: g_main_context_check() called recursively from within a source's check() or prepare() member. (Rterm.exe:3544): GLib-WARNING **: g_main_context_prepare(): main loop already active in another thread tools::codocClasses(package = "hydrosanity") * checking Rd \usage sections ... NOTE (Rterm.exe:268): GLib-WARNING **: g_main_context_prepare(): main loop already active in another thread (Rterm.exe:268): GLib-WARNING **: g_main_context_prepare(): main loop already active in another thread (Rterm.exe:268): GLib-WARNING **: g_main_context_prepare(): main loop already active in another thread (Rterm.exe:268): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:268): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:268): GLib-WARNING **: g_main_context_prepare() called recursively from within a source's check() or prepare() member. (Rterm.exe:268): GLib-WARNING **: g_main_context_prepare(): main loop already active in another thread tools::checkDocStyle(package = "hydrosanity") The \usage entries for S3 methods should use the \method markup and not their full name. See the chapter 'Writing R documentation files' in manual 'Writing R Extensions'. * creating hydrosanity-Ex.R ... OK * checking examples ... OK * creating hydrosanity-manual.tex ... OK * checking hydrosanity-manual.tex using pdflatex ... OK