* using log directory 'd:/Rcompile/CRANpkg/local/2.7/mclust02.Rcheck' * using R version 2.7.2 RC (2008-08-18 r46382) * using session charset: ISO8859-1 * checking for file 'mclust02/DESCRIPTION' ... OK * this is package 'mclust02' version '2.1-17' * checking package dependencies ... OK * checking if this is a source package ... OK * checking whether package 'mclust02' can be installed ... OK * checking package directory ... OK * checking for portable file names ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking for unstated dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... NOTE cdensEEE: no visible binding for global variable 'sigma' classErrors : q: no visible global function definition for 'name' emVVV: no visible binding for global variable 'decomp' estepEEE: no visible binding for global variable 'sigma' simEEE: no visible binding for global variable 'sigma' simVVV: no visible binding for global variable 'p' Found possibly global 'T' or 'F' in the following function: simVVV * checking Rd files ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... NOTE S3 methods shown with full name in documentation object 'plot.Mclust': plot.Mclust S3 methods shown with full name in documentation object 'plot.mclustDA': plot.mclustDA S3 methods shown with full name in documentation object 'summary.EMclust': summary.EMclust S3 methods shown with full name in documentation object 'summary.EMclustN': summary.EMclustN S3 methods shown with full name in documentation object 'summary.Mclust': summary.Mclust S3 methods shown with full name in documentation object 'summary.mclustDAtest': summary.mclustDAtest S3 methods shown with full name in documentation object 'summary.mclustDAtrain': summary.mclustDAtrain The \usage entries for S3 methods should use the \method markup and not their full name. See the chapter 'Writing R documentation files' in manual 'Writing R Extensions'. * checking data for non-ASCII characters ... OK * checking line endings in C/C++/Fortran sources/headers ... OK * checking line endings in Makefiles ... OK * checking for portable compilation flags in Makevars ... OK * checking for portable use of $BLAS_LIBS ... OK * creating mclust02-Ex.R ... OK * checking examples ... OK * creating mclust02-manual.tex ... OK * checking mclust02-manual.tex using pdflatex ... OK