* using log directory 'd:/Rcompile/CRANpkg/local/2.8/Metabonomic.Rcheck' * using R version 2.8.1 (2008-12-22) * using session charset: ISO8859-1 * checking for file 'Metabonomic/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'Metabonomic' version '3.1.3.3' * checking package dependencies ... OK * checking if this is a source package ... OK * checking whether package 'Metabonomic' can be installed ... OK * checking package directory ... OK * checking for portable file names ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking for unstated dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... NOTE Baseline.Correction: no visible binding for global variable 'datos' Baseline.Correction : plotFunction: no visible binding for global variable 'datos' Baseline.Correction : plotFunction: no visible binding for '<<-' assignment to 'a3' Baseline.Correction : plotFunction: no visible binding for global variable 'a3' Baseline.Correction : change.color.bakground : onCancel: no visible binding for '<<-' assignment to 'ReturnVal' Baseline.Correction : modalDialog4 : onOK: no visible binding for '<<-' assignment to 'main' Baseline.Correction : Zoom : onCancel: no visible binding for '<<-' assignment to 'ReturnVal' Baseline.Correction : Text.size : onCancel: no visible binding for '<<-' assignment to 'ReturnVal' Baseline.Correction : Text.size: no visible binding for global variable 'ReturnVal' Baseline.Correction : onok: no visible binding for global variable 'a3' Baseline.Correction : onok: no visible binding for '<<-' assignment to 'datos' Baseline.Correction : onok: no visible binding for global variable 'datos' Baseline.Correction : onok: no visible binding for '<<-' assignment to 'memory' Baseline.Correction : onok: no visible binding for global variable 'memory' Baseline.Correction : onok: no visible binding for '<<-' assignment to 'memory.data' Baseline.Correction : onok: no visible binding for global variable 'memory.data' Baseline.Correction : : no visible binding for global variable 'main' Import.data: no visible binding for '<<-' assignment to 'memory' Import.data: no visible binding for '<<-' assignment to 'file.out' Manual.cut: no visible binding for global variable 'console' Manual.cut: no visible binding for '<<-' assignment to 'memory' Manual.cut: no visible binding for global variable 'memory' Manual.cut: no visible binding for global variable 'datos' Manual.cut : cut : onOK: no visible binding for '<<-' assignment to 'xlim' Manual.cut : cut : onOK: no visible binding for '<<-' assignment to 'xlim2' Manual.cut : cut : onCancel: no visible binding for '<<-' assignment to 'ReturnVal' Manual.cut: no visible binding for global variable 'xlim' Manual.cut: no visible binding for global variable 'xlim2' Manual.cut: no visible binding for '<<-' assignment to 'datos' Manual.cut: no visible binding for '<<-' assignment to 'memory.data' Manual.cut: no visible binding for global variable 'memory.data' Met.Aligm: no visible binding for global variable 'console' Met.Aligm: no visible binding for '<<-' assignment to 'memory' Met.Aligm: no visible binding for global variable 'memory' Met.Aligm: no visible binding for '<<-' assignment to 'memory.data' Met.Aligm: no visible binding for global variable 'memory.data' Met.B.STAT: no visible binding for global variable 'console' Met.B.STAT: no visible binding for global variable 'categoria' Met.B.STAT : f2a: no visible binding for '<<-' assignment to 'plotFunction' Met.B.STAT : f2a: no visible global function definition for 'plotFunction' Met.B.STAT : f2a: no visible binding for global variable 'xlab' Met.B.STAT : f2a: no visible binding for global variable 'ylab' Met.B.STAT : f2a : change.color.bakground : onOK: no visible global function definition for 'plotFunction' Met.B.STAT : f2a : change.color.bakground : onOK: no visible binding for global variable 'xlab' Met.B.STAT : f2a : change.color.bakground : onOK: no visible binding for global variable 'ylab' Met.B.STAT : f2a : change.color.bakground : onCancel: no visible binding for '<<-' assignment to 'ReturnVal' Met.B.STAT : f2a : met : OnOK: no visible global function definition for 'plotFunction' Met.B.STAT : f2a : met : OnOK: no visible binding for global variable 'xlab' Met.B.STAT : f2a : met : OnOK: no visible binding for global variable 'ylab' Met.B.STAT : f2a : by.name: no visible global function definition for 'plotFunction' Met.B.STAT : f2a : by.name: no visible binding for global variable 'xlab' Met.B.STAT : f2a : by.name: no visible binding for global variable 'ylab' Met.B.STAT : f2a : by.type: no visible binding for global variable 'categoria' Met.B.STAT : f2a : by.type: no visible global function definition for 'plotFunction' Met.B.STAT : f2a : by.type: no visible binding for global variable 'xlab' Met.B.STAT : f2a : by.type: no visible binding for global variable 'ylab' Met.B.STAT : f2a : modalDialog4 : onOK: no visible binding for '<<-' assignment to 'xlab' Met.B.STAT : f2a : modalDialog4 : onOK: no visible binding for '<<-' assignment to 'ylab' Met.B.STAT : f2a : modalDialog4 : onOK: no visible global function definition for 'plotFunction' Met.B.STAT : f2a : modalDialog4 : onOK: no visible binding for global variable 'xlab' Met.B.STAT : f2a : modalDialog4 : onOK: no visible binding for global variable 'ylab' Met.B.STAT : f2a : Text.size : onOK: no visible global function definition for 'plotFunction' Met.B.STAT : f2a : Text.size : onOK: no visible binding for global variable 'xlab' Met.B.STAT : f2a : Text.size : onOK: no visible binding for global variable 'ylab' Met.B.STAT : f2a : Text.size : onCancel: no visible binding for '<<-' assignment to 'ReturnVal' Met.B.STAT : f2a : Text.size: no visible binding for global variable 'ReturnVal' Met.B.STAT : f2a : CopyToClip: no visible global function definition for 'plotFunction' Met.B.STAT : f2a : CopyToClip: no visible binding for global variable 'xlab' Met.B.STAT : f2a : CopyToClip: no visible binding for global variable 'ylab' Met.B.STAT : f2a : : no visible binding for global variable 'xlab' Met.B.STAT : f2a : : no visible binding for global variable 'ylab' Met.Baseline: no visible binding for global variable 'console' Met.Baseline: no visible binding for '<<-' assignment to 'memory' Met.Baseline: no visible binding for global variable 'memory' Met.Baseline: no visible binding for '<<-' assignment to 'memory.data' Met.Baseline: no visible binding for global variable 'memory.data' Met.Binning: no visible binding for global variable 'console' Met.Binning: no visible binding for '<<-' assignment to 'memory' Met.Binning: no visible binding for global variable 'memory' Met.Binning: no visible binding for '<<-' assignment to 'memory.data' Met.Binning: no visible binding for global variable 'memory.data' Met.KNN: no visible binding for global variable 'console' Met.KNN : Met.text.check : onOK: no visible binding for '<<-' assignment to 'ReturnVal' Met.KNN : Met.text.check : onCancel: no visible binding for '<<-' assignment to 'ReturnVal' Met.KNN : Met.text.check: no visible binding for global variable 'ReturnVal' Met.KNN : Met.model: no visible binding for global variable 'clase1' Met.KNN : Met.model: no visible binding for global variable 'clase2' Met.KNN : Met.model: no visible binding for global variable 'clase3' Met.KNN : Met.model: no visible binding for global variable 'clase4' Met.KNN : Met.model : onOK: no visible binding for global variable 'clase3' Met.KNN : Met.model : onOK: no visible binding for '<<-' assignment to 'elementos' Met.KNN : Met.model : onOK: no visible binding for global variable 'clase4' Met.KNN : Met.model : onCancel: no visible binding for '<<-' assignment to 'ReturnVal' Met.KNN: no visible binding for global variable 'categoria' Met.KNN: no visible binding for global variable 'clase1' Met.KNN: no visible binding for global variable 'clase2' Met.KNN: no visible binding for global variable 'clase3' Met.KNN: no visible binding for global variable 'clase4' Met.KNN: no visible binding for global variable 'm.model' Met.KNN: no visible binding for global variable 'elementos' Met.KNN: no visible binding for global variable 'ReturnVal' Met.LDA: no visible binding for global variable 'console' Met.LDA: no visible binding for global variable 'clase3' Met.LDA: no visible binding for global variable 'clase4' Met.LDA : Met.model : onOK: no visible binding for '<<-' assignment to 'elementos' Met.LDA : Met.model : onCancel: no visible binding for '<<-' assignment to 'ReturnVal' Met.LDA: no visible binding for global variable 'categoria' Met.LDA: no visible binding for global variable 'clase2' Met.LDA: no visible binding for global variable 'clase1' Met.LDA: no visible binding for global variable 'm.model' Met.LDA: no visible binding for global variable 'elementos' Met.LDA : f2: no visible binding for '<<-' assignment to 'plotFunction' Met.LDA : f2: no visible global function definition for 'plotFunction' Met.LDA : f2 : change.color.bakground : onOK: no visible global function definition for 'plotFunction' Met.LDA : f2 : change.color.bakground : onCancel: no visible binding for '<<-' assignment to 'ReturnVal' Met.LDA : f2 : by.name: no visible global function definition for 'plotFunction' Met.LDA : f2 : by.type: no visible binding for global variable 'categoria' Met.LDA : f2 : by.type: no visible global function definition for 'plotFunction' Met.LDA : f2 : modalDialog4 : onOK: no visible global function definition for 'plotFunction' Met.LDA : f2 : Text.size : onOK: no visible global function definition for 'plotFunction' Met.LDA : f2 : Text.size : onCancel: no visible binding for '<<-' assignment to 'ReturnVal' Met.LDA : f2 : Text.size: no visible binding for global variable 'ReturnVal' Met.LDA : f2 : CopyToClip: no visible global function definition for 'plotFunction' Met.LDA.multi : Met.model: no visible binding for global variable 'clase1' Met.LDA.multi : Met.model: no visible binding for global variable 'clase2' Met.LDA.multi : Met.model: no visible binding for global variable 'clase3' Met.LDA.multi : Met.model : onOK: no visible binding for '<<-' assignment to 'elementos' Met.LDA.multi : Met.model : onCancel: no visible binding for '<<-' assignment to 'ReturnVal' Met.LDA.multi: no visible binding for global variable 'categoria' Met.LDA.multi: no visible binding for global variable 'clase1' Met.LDA.multi: no visible binding for global variable 'clase2' Met.LDA.multi: no visible binding for global variable 'clase3' Met.LDA.multi: no visible binding for global variable 'm.model' Met.LDA.multi: no visible binding for global variable 'elementos' Met.LDA.multi : f2: no visible binding for '<<-' assignment to 'plotFunction' Met.LDA.multi : f2: no visible global function definition for 'plotFunction' Met.LDA.multi : f2 : change.color.bakground : onOK: no visible global function definition for 'plotFunction' Met.LDA.multi : f2 : change.color.bakground : onCancel: no visible binding for '<<-' assignment to 'ReturnVal' Met.LDA.multi : f2 : by.name: no visible global function definition for 'plotFunction' Met.LDA.multi : f2 : by.type: no visible binding for global variable 'categoria' Met.LDA.multi : f2 : by.type: no visible global function definition for 'plotFunction' Met.LDA.multi : f2 : modalDialog4 : onOK: no visible global function definition for 'plotFunction' Met.LDA.multi : f2 : Text.size : onOK: no visible global function definition for 'plotFunction' Met.LDA.multi : f2 : Text.size : onCancel: no visible binding for '<<-' assignment to 'ReturnVal' Met.LDA.multi : f2 : Text.size: no visible binding for global variable 'ReturnVal' Met.LDA.multi : f2 : CopyToClip: no visible global function definition for 'plotFunction' Met.LDA.multi2 : Met.model: no visible binding for global variable 'clase1' Met.LDA.multi2 : Met.model: no visible binding for global variable 'clase2' Met.LDA.multi2 : Met.model: no visible binding for global variable 'clase3' Met.LDA.multi2 : Met.model: no visible binding for global variable 'clase4' Met.LDA.multi2 : Met.model : onOK: no visible binding for '<<-' assignment to 'elementos' Met.LDA.multi2 : Met.model : onCancel: no visible binding for '<<-' assignment to 'ReturnVal' Met.LDA.multi2: no visible binding for global variable 'categoria' Met.LDA.multi2: no visible binding for global variable 'clase1' Met.LDA.multi2: no visible binding for global variable 'clase2' Met.LDA.multi2: no visible binding for global variable 'clase3' Met.LDA.multi2: no visible binding for global variable 'clase4' Met.LDA.multi2: no visible binding for global variable 'm.model' Met.LDA.multi2: no visible binding for global variable 'elementos' Met.LDA.multi2 : f2: no visible binding for '<<-' assignment to 'plotFunction' Met.LDA.multi2 : f2: no visible global function definition for 'plotFunction' Met.LDA.multi2 : f2 : change.color.bakground : onOK: no visible global function definition for 'plotFunction' Met.LDA.multi2 : f2 : change.color.bakground : onCancel: no visible binding for '<<-' assignment to 'ReturnVal' Met.LDA.multi2 : f2 : by.name: no visible global function definition for 'plotFunction' Met.LDA.multi2 : f2 : by.type: no visible binding for global variable 'categoria' Met.LDA.multi2 : f2 : by.type: no visible global function definition for 'plotFunction' Met.LDA.multi2 : f2 : modalDialog4 : onOK: no visible global function definition for 'plotFunction' Met.LDA.multi2 : f2 : Text.size : onOK: no visible global function definition for 'plotFunction' Met.LDA.multi2 : f2 : Text.size : onCancel: no visible binding for '<<-' assignment to 'ReturnVal' Met.LDA.multi2 : f2 : Text.size: no visible binding for global variable 'ReturnVal' Met.LDA.multi2 : f2 : Comp: no visible binding for global variable 'ncomp' Met.LDA.multi2 : f2 : Comp : onOK: no visible global function definition for 'plotFunction' Met.LDA.multi2 : f2 : Comp : onCancel: no visible binding for '<<-' assignment to 'ReturnVal' Met.LDA.multi2 : f2 : CopyToClip: no visible global function definition for 'plotFunction' Met.Load.Data: no visible binding for '<<-' assignment to 'memory' Met.Load.Data: no visible binding for global variable 'console' Met.Load.Data: no visible binding for '<<-' assignment to 'memory.data' Met.Load.Data: no visible binding for global variable 'memory.data' Met.Load.Data: no visible binding for global variable 'memory' Met.Metabolites: no visible binding for global variable 'console' Met.Metabolites : list.spectrum: no visible binding for '<<-' assignment to 'Index' Met.Metabolites : list.spectrum : onOK: no visible binding for global variable 'Index' Met.Metabolites : list.spectrum : DeleteSelection: no visible binding for '<<-' assignment to 'Index' Met.Metabolites : list.spectrum : DeleteSelection: no visible binding for global variable 'Index' Met.Metabolites: no visible binding for '<<-' assignment to 'memory' Met.Metabolites: no visible binding for global variable 'memory' Met.Metabolites: no visible binding for '<<-' assignment to 'memory.data' Met.Metabolites: no visible binding for global variable 'memory.data' Met.NN1: no visible binding for global variable 'console' Met.NN1 : Met.model: no visible binding for global variable 'clase1' Met.NN1 : Met.model: no visible binding for global variable 'clase2' Met.NN1 : Met.model: no visible binding for global variable 'clase3' Met.NN1 : Met.model: no visible binding for global variable 'clase4' Met.NN1 : Met.model : onOK: no visible binding for global variable 'clase3' Met.NN1 : Met.model : onOK: no visible binding for '<<-' assignment to 'elementos' Met.NN1 : Met.model : onOK: no visible binding for global variable 'clase4' Met.NN1 : Met.model : onCancel: no visible binding for '<<-' assignment to 'ReturnVal' Met.NN1: no visible binding for global variable 'categoria' Met.NN1: no visible binding for global variable 'clase1' Met.NN1: no visible binding for global variable 'clase2' Met.NN1: no visible binding for global variable 'clase3' Met.NN1: no visible binding for global variable 'clase4' Met.NN1: no visible binding for global variable 'm.model' Met.NN1: no visible binding for global variable 'elementos' Met.NN2: no visible binding for global variable 'console' Met.NN2 : Met.text.radio : onOK: no visible binding for '<<-' assignment to 'ReturnVal' Met.NN2 : Met.text.radio : onCancel: no visible binding for '<<-' assignment to 'ReturnVal' Met.NN2 : Met.text.radio: no visible binding for global variable 'ReturnVal' Met.NN2 : Met.model: no visible binding for global variable 'clase1' Met.NN2 : Met.model: no visible binding for global variable 'clase2' Met.NN2 : Met.model: no visible binding for global variable 'clase3' Met.NN2 : Met.model: no visible binding for global variable 'clase4' Met.NN2 : Met.model : onOK: no visible binding for global variable 'clase3' Met.NN2 : Met.model : onOK: no visible binding for '<<-' assignment to 'elementos' Met.NN2 : Met.model : onOK: no visible binding for global variable 'clase4' Met.NN2 : Met.model : onCancel: no visible binding for '<<-' assignment to 'ReturnVal' Met.NN2: no visible binding for global variable 'categoria' Met.NN2: no visible binding for global variable 'clase1' Met.NN2: no visible binding for global variable 'clase2' Met.NN2: no visible binding for global variable 'clase3' Met.NN2: no visible binding for global variable 'clase4' Met.NN2: no visible binding for global variable 'm.model' Met.NN2: no visible binding for global variable 'elementos' Met.NN2: no visible binding for global variable 'ReturnVal' Met.Norm: no visible binding for global variable 'console' Met.Norm: no visible binding for '<<-' assignment to 'memory' Met.Norm: no visible binding for global variable 'memory' Met.Norm: no visible binding for '<<-' assignment to 'memory.data' Met.Norm: no visible binding for global variable 'memory.data' Met.Order: no visible binding for global variable 'console' Met.Order: no visible binding for global variable 'categoria' Met.Order: no visible binding for '<<-' assignment to 'ordtotal.a' Met.Order: no visible binding for global variable 'ordtotal.a' Met.Outliers: no visible binding for global variable 'console' Met.Outliers: no visible binding for '<<-' assignment to 'memory' Met.Outliers: no visible binding for global variable 'memory' Met.Outliers: no visible binding for '<<-' assignment to 'memory.data' Met.Outliers: no visible binding for global variable 'memory.data' Met.PCA: no visible binding for global variable 'console' Met.PCA : f2 : change.color.bakground : onCancel: no visible binding for '<<-' assignment to 'ReturnVal' Met.PCA : f2 : by.type: no visible binding for global variable 'categoria' Met.PCA : f2 : Text.size : onCancel: no visible binding for '<<-' assignment to 'ReturnVal' Met.PCA : f2 : Text.size: no visible binding for global variable 'ReturnVal' Met.PCA : f2 : Comp : onCancel: no visible binding for '<<-' assignment to 'ReturnVal' Met.PLS1: no visible binding for global variable 'console' Met.PLS1 : Met.model : onOK: no visible binding for '<<-' assignment to 'elementos' Met.PLS1 : Met.model : onCancel: no visible binding for '<<-' assignment to 'ReturnVal' Met.PLS1: no visible binding for global variable 'categoria' Met.PLS1: no visible binding for global variable 'clase2' Met.PLS1: no visible binding for global variable 'clase1' Met.PLS1: no visible binding for global variable 'm.model' Met.PLS1: no visible binding for global variable 'elementos' Met.PLS2: no visible binding for global variable 'console' Met.PLS2: no visible binding for global variable 'clase3' Met.PLS2: no visible binding for global variable 'clase4' Met.PLS2 : Met.check.radio : onOK: no visible binding for '<<-' assignment to 'ReturnVal' Met.PLS2 : Met.check.radio : onCancel: no visible binding for '<<-' assignment to 'ReturnVal' Met.PLS2 : Met.check.radio: no visible binding for global variable 'ReturnVal' Met.PLS2 : Met.model: no visible binding for global variable 'clase1' Met.PLS2 : Met.model: no visible binding for global variable 'clase2' Met.PLS2 : Met.model : onOK: no visible binding for '<<-' assignment to 'elementos' Met.PLS2 : Met.model : onCancel: no visible binding for '<<-' assignment to 'ReturnVal' Met.PLS2: no visible binding for global variable 'categoria' Met.PLS2: no visible binding for global variable 'clase2' Met.PLS2: no visible binding for global variable 'clase1' Met.PLS2: no visible binding for global variable 'm.model' Met.PLS2: no visible binding for global variable 'elementos' Met.PLS2: no visible binding for global variable 'ReturnVal' Met.PLS2 : f2 : change.color.bakground : onCancel: no visible binding for '<<-' assignment to 'ReturnVal' Met.PLS2 : f2 : Text.size : onCancel: no visible binding for '<<-' assignment to 'ReturnVal' Met.PLS2 : f2 : Text.size: no visible binding for global variable 'ReturnVal' Met.PLS2 : f2a: no visible binding for '<<-' assignment to 'plotFunction' Met.PLS2 : f2a: no visible global function definition for 'plotFunction' Met.PLS2 : f2a : change.color.bakground : onOK: no visible global function definition for 'plotFunction' Met.PLS2 : f2a : change.color.bakground : onCancel: no visible binding for '<<-' assignment to 'ReturnVal' Met.PLS2 : f2a : by.name: no visible global function definition for 'plotFunction' Met.PLS2 : f2a : by.type: no visible binding for global variable 'categoria' Met.PLS2 : f2a : by.type: no visible global function definition for 'plotFunction' Met.PLS2 : f2a : modalDialog4 : onOK: no visible global function definition for 'plotFunction' Met.PLS2 : f2a : Text.size : onOK: no visible global function definition for 'plotFunction' Met.PLS2 : f2a : Text.size : onCancel: no visible binding for '<<-' assignment to 'ReturnVal' Met.PLS2 : f2a : Text.size: no visible binding for global variable 'ReturnVal' Met.PLS2 : f2a : CopyToClip: no visible global function definition for 'plotFunction' Met.PLS2 : f2a : Angle : onOK: no visible global function definition for 'plotFunction' Met.PLS2 : f2a : Angle : onCancel: no visible binding for '<<-' assignment to 'ReturnVal' Met.PLS2 : f2a : Comp : onOK: no visible global function definition for 'plotFunction' Met.PLS2 : f2a : Comp : onCancel: no visible binding for '<<-' assignment to 'ReturnVal' Met.PLS2 : f2d: no visible binding for '<<-' assignment to 'plotFunction' Met.PLS2 : f2d: no visible global function definition for 'plotFunction' Met.PLS2 : f2d : change.color.bakground : onOK: no visible global function definition for 'plotFunction' Met.PLS2 : f2d : change.color.bakground : onCancel: no visible binding for '<<-' assignment to 'ReturnVal' Met.PLS2 : f2d : by.name: no visible global function definition for 'plotFunction' Met.PLS2 : f2d : by.type: no visible binding for global variable 'categoria' Met.PLS2 : f2d : by.type: no visible global function definition for 'plotFunction' Met.PLS2 : f2d : modalDialog4 : onOK: no visible global function definition for 'plotFunction' Met.PLS2 : f2d : modalDialog4: no visible binding for global variable 'textEntryWidget' Met.PLS2 : f2d : Text.size : onOK: no visible global function definition for 'plotFunction' Met.PLS2 : f2d : Text.size : onCancel: no visible binding for '<<-' assignment to 'ReturnVal' Met.PLS2 : f2d : Text.size: no visible binding for global variable 'ReturnVal' Met.PLS2 : f2d : Comp : onOK: no visible global function definition for 'plotFunction' Met.PLS2 : f2d : Comp : onCancel: no visible binding for '<<-' assignment to 'ReturnVal' Met.PLS2 : f2d : CopyToClip: no visible global function definition for 'plotFunction' Met.PLS2 : f2: no visible binding for '<<-' assignment to 'plotFunction' Met.PLS2 : f2: no visible global function definition for 'plotFunction' Met.PLS2 : f2 : change.color.bakground : onOK: no visible global function definition for 'plotFunction' Met.PLS2 : f2 : by.name: no visible global function definition for 'plotFunction' Met.PLS2 : f2 : by.type: no visible binding for global variable 'categoria' Met.PLS2 : f2 : by.type: no visible global function definition for 'plotFunction' Met.PLS2 : f2 : modalDialog4 : onOK: no visible global function definition for 'plotFunction' Met.PLS2 : f2 : Text.size : onOK: no visible global function definition for 'plotFunction' Met.PLS2 : f2 : CopyToClip: no visible global function definition for 'plotFunction' Met.PLS2.multi : Met.check.radio : onOK: no visible binding for '<<-' assignment to 'ReturnVal' Met.PLS2.multi : Met.check.radio : onCancel: no visible binding for '<<-' assignment to 'ReturnVal' Met.PLS2.multi : Met.check.radio: no visible binding for global variable 'ReturnVal' Met.PLS2.multi : Met.model: no visible binding for global variable 'clase1' Met.PLS2.multi : Met.model: no visible binding for global variable 'clase2' Met.PLS2.multi : Met.model: no visible binding for global variable 'clase3' Met.PLS2.multi : Met.model : onOK: no visible binding for '<<-' assignment to 'elementos' Met.PLS2.multi : Met.model : onCancel: no visible binding for '<<-' assignment to 'ReturnVal' Met.PLS2.multi: no visible binding for global variable 'categoria' Met.PLS2.multi: no visible binding for global variable 'clase1' Met.PLS2.multi: no visible binding for global variable 'clase2' Met.PLS2.multi: no visible binding for global variable 'clase3' Met.PLS2.multi: no visible binding for global variable 'm.model' Met.PLS2.multi: no visible binding for global variable 'elementos' Met.PLS2.multi: no visible binding for global variable 'ReturnVal' Met.PLS2.multi : f2 : change.color.bakground : onCancel: no visible binding for '<<-' assignment to 'ReturnVal' Met.PLS2.multi : f2 : Text.size : onCancel: no visible binding for '<<-' assignment to 'ReturnVal' Met.PLS2.multi : f2 : Text.size: no visible binding for global variable 'ReturnVal' Met.PLS2.multi : f2a: no visible binding for '<<-' assignment to 'plotFunction' Met.PLS2.multi : f2a: no visible global function definition for 'plotFunction' Met.PLS2.multi : f2a : change.color.bakground : onOK: no visible global function definition for 'plotFunction' Met.PLS2.multi : f2a : change.color.bakground : onCancel: no visible binding for '<<-' assignment to 'ReturnVal' Met.PLS2.multi : f2a : by.name: no visible global function definition for 'plotFunction' Met.PLS2.multi : f2a : by.type: no visible binding for global variable 'categoria' Met.PLS2.multi : f2a : by.type: no visible global function definition for 'plotFunction' Met.PLS2.multi : f2a : modalDialog4 : onOK: no visible global function definition for 'plotFunction' Met.PLS2.multi : f2a : Text.size : onOK: no visible global function definition for 'plotFunction' Met.PLS2.multi : f2a : Text.size : onCancel: no visible binding for '<<-' assignment to 'ReturnVal' Met.PLS2.multi : f2a : Text.size: no visible binding for global variable 'ReturnVal' Met.PLS2.multi : f2a : CopyToClip: no visible global function definition for 'plotFunction' Met.PLS2.multi : f2a : Angle : onOK: no visible global function definition for 'plotFunction' Met.PLS2.multi : f2a : Angle : onCancel: no visible binding for '<<-' assignment to 'ReturnVal' Met.PLS2.multi : f2a : Comp : onOK: no visible global function definition for 'plotFunction' Met.PLS2.multi : f2a : Comp : onCancel: no visible binding for '<<-' assignment to 'ReturnVal' Met.PLS2.multi : f2d: no visible binding for '<<-' assignment to 'plotFunction' Met.PLS2.multi : f2d: no visible global function definition for 'plotFunction' Met.PLS2.multi : f2d : change.color.bakground : onOK: no visible global function definition for 'plotFunction' Met.PLS2.multi : f2d : change.color.bakground : onCancel: no visible binding for '<<-' assignment to 'ReturnVal' Met.PLS2.multi : f2d : by.name: no visible global function definition for 'plotFunction' Met.PLS2.multi : f2d : by.type: no visible binding for global variable 'categoria' Met.PLS2.multi : f2d : by.type: no visible global function definition for 'plotFunction' Met.PLS2.multi : f2d : modalDialog4 : onOK: no visible global function definition for 'plotFunction' Met.PLS2.multi : f2d : modalDialog4: no visible binding for global variable 'textEntryWidget' Met.PLS2.multi : f2d : Text.size : onOK: no visible global function definition for 'plotFunction' Met.PLS2.multi : f2d : Text.size : onCancel: no visible binding for '<<-' assignment to 'ReturnVal' Met.PLS2.multi : f2d : Text.size: no visible binding for global variable 'ReturnVal' Met.PLS2.multi : f2d : Comp : onOK: no visible global function definition for 'plotFunction' Met.PLS2.multi : f2d : Comp : onCancel: no visible binding for '<<-' assignment to 'ReturnVal' Met.PLS2.multi : f2d : CopyToClip: no visible global function definition for 'plotFunction' Met.PLS2.multi: no visible global function definition for 'lenght' Met.PLS2.multi : f2: no visible binding for '<<-' assignment to 'plotFunction' Met.PLS2.multi : f2: no visible global function definition for 'plotFunction' Met.PLS2.multi : f2 : change.color.bakground : onOK: no visible global function definition for 'plotFunction' Met.PLS2.multi : f2 : by.name: no visible global function definition for 'plotFunction' Met.PLS2.multi : f2 : by.type: no visible binding for global variable 'categoria' Met.PLS2.multi : f2 : by.type: no visible global function definition for 'plotFunction' Met.PLS2.multi : f2 : modalDialog4 : onOK: no visible global function definition for 'plotFunction' Met.PLS2.multi : f2 : Text.size : onOK: no visible global function definition for 'plotFunction' Met.PLS2.multi : f2 : CopyToClip: no visible global function definition for 'plotFunction' Met.PLS2.multi2 : Met.check.radio : onOK: no visible binding for '<<-' assignment to 'ReturnVal' Met.PLS2.multi2 : Met.check.radio : onCancel: no visible binding for '<<-' assignment to 'ReturnVal' Met.PLS2.multi2 : Met.check.radio: no visible binding for global variable 'ReturnVal' Met.PLS2.multi2 : Met.model: no visible binding for global variable 'clase1' Met.PLS2.multi2 : Met.model: no visible binding for global variable 'clase2' Met.PLS2.multi2 : Met.model: no visible binding for global variable 'clase3' Met.PLS2.multi2 : Met.model: no visible binding for global variable 'clase4' Met.PLS2.multi2 : Met.model : onOK: no visible binding for '<<-' assignment to 'elementos' Met.PLS2.multi2 : Met.model : onCancel: no visible binding for '<<-' assignment to 'ReturnVal' Met.PLS2.multi2: no visible binding for global variable 'categoria' Met.PLS2.multi2: no visible binding for global variable 'clase1' Met.PLS2.multi2: no visible binding for global variable 'clase2' Met.PLS2.multi2: no visible binding for global variable 'clase3' Met.PLS2.multi2: no visible binding for global variable 'clase4' Met.PLS2.multi2: no visible binding for global variable 'm.model' Met.PLS2.multi2: no visible binding for global variable 'elementos' Met.PLS2.multi2: no visible binding for global variable 'ReturnVal' Met.PLS2.multi2 : f2 : change.color.bakground : onCancel: no visible binding for '<<-' assignment to 'ReturnVal' Met.PLS2.multi2 : f2 : Text.size : onCancel: no visible binding for '<<-' assignment to 'ReturnVal' Met.PLS2.multi2 : f2 : Text.size: no visible binding for global variable 'ReturnVal' Met.PLS2.multi2 : f2a: no visible binding for '<<-' assignment to 'plotFunction' Met.PLS2.multi2 : f2a: no visible global function definition for 'plotFunction' Met.PLS2.multi2 : f2a : change.color.bakground : onOK: no visible global function definition for 'plotFunction' Met.PLS2.multi2 : f2a : change.color.bakground : onCancel: no visible binding for '<<-' assignment to 'ReturnVal' Met.PLS2.multi2 : f2a : by.name: no visible global function definition for 'plotFunction' Met.PLS2.multi2 : f2a : by.type: no visible binding for global variable 'categoria' Met.PLS2.multi2 : f2a : by.type: no visible global function definition for 'plotFunction' Met.PLS2.multi2 : f2a : modalDialog4 : onOK: no visible global function definition for 'plotFunction' Met.PLS2.multi2 : f2a : Text.size : onOK: no visible global function definition for 'plotFunction' Met.PLS2.multi2 : f2a : Text.size : onCancel: no visible binding for '<<-' assignment to 'ReturnVal' Met.PLS2.multi2 : f2a : Text.size: no visible binding for global variable 'ReturnVal' Met.PLS2.multi2 : f2a : CopyToClip: no visible global function definition for 'plotFunction' Met.PLS2.multi2 : f2a : Angle : onOK: no visible global function definition for 'plotFunction' Met.PLS2.multi2 : f2a : Angle : onCancel: no visible binding for '<<-' assignment to 'ReturnVal' Met.PLS2.multi2 : f2a : Comp : onOK: no visible global function definition for 'plotFunction' Met.PLS2.multi2 : f2a : Comp : onCancel: no visible binding for '<<-' assignment to 'ReturnVal' Met.PLS2.multi2 : f2d: no visible binding for '<<-' assignment to 'plotFunction' Met.PLS2.multi2 : f2d: no visible global function definition for 'plotFunction' Met.PLS2.multi2 : f2d : change.color.bakground : onOK: no visible global function definition for 'plotFunction' Met.PLS2.multi2 : f2d : change.color.bakground : onCancel: no visible binding for '<<-' assignment to 'ReturnVal' Met.PLS2.multi2 : f2d : by.name: no visible global function definition for 'plotFunction' Met.PLS2.multi2 : f2d : by.type: no visible binding for global variable 'categoria' Met.PLS2.multi2 : f2d : by.type: no visible global function definition for 'plotFunction' Met.PLS2.multi2 : f2d : modalDialog4 : onOK: no visible global function definition for 'plotFunction' Met.PLS2.multi2 : f2d : modalDialog4: no visible binding for global variable 'textEntryWidget' Met.PLS2.multi2 : f2d : Text.size : onOK: no visible global function definition for 'plotFunction' Met.PLS2.multi2 : f2d : Text.size : onCancel: no visible binding for '<<-' assignment to 'ReturnVal' Met.PLS2.multi2 : f2d : Text.size: no visible binding for global variable 'ReturnVal' Met.PLS2.multi2 : f2d : Comp : onOK: no visible global function definition for 'plotFunction' Met.PLS2.multi2 : f2d : Comp : onCancel: no visible binding for '<<-' assignment to 'ReturnVal' Met.PLS2.multi2 : f2d : CopyToClip: no visible global function definition for 'plotFunction' Met.PLS2.multi2: no visible global function definition for 'lenght' Met.PLS2.multi2 : f2: no visible binding for '<<-' assignment to 'plotFunction' Met.PLS2.multi2 : f2: no visible global function definition for 'plotFunction' Met.PLS2.multi2 : f2 : change.color.bakground : onOK: no visible global function definition for 'plotFunction' Met.PLS2.multi2 : f2 : by.name: no visible global function definition for 'plotFunction' Met.PLS2.multi2 : f2 : by.type: no visible binding for global variable 'categoria' Met.PLS2.multi2 : f2 : by.type: no visible global function definition for 'plotFunction' Met.PLS2.multi2 : f2 : modalDialog4 : onOK: no visible global function definition for 'plotFunction' Met.PLS2.multi2 : f2 : Text.size : onOK: no visible global function definition for 'plotFunction' Met.PLS2.multi2 : f2 : CopyToClip: no visible global function definition for 'plotFunction' Met.PLS3D : Met.check.radio : onOK: no visible binding for '<<-' assignment to 'ReturnVal' Met.PLS3D : Met.check.radio : onCancel: no visible binding for '<<-' assignment to 'ReturnVal' Met.PLS3D : Met.check.radio: no visible binding for global variable 'ReturnVal' Met.PLS3D : Met.model : onOK: no visible binding for '<<-' assignment to 'elementos' Met.PLS3D : Met.model : onCancel: no visible binding for '<<-' assignment to 'ReturnVal' Met.PLS3D: no visible binding for global variable 'categoria' Met.PLS3D: no visible binding for global variable 'clase2' Met.PLS3D: no visible binding for global variable 'clase1' Met.PLS3D: no visible binding for global variable 'elementos' Met.PLS3D: no visible binding for global variable 'ReturnVal' Met.PLS3D : f2a: no visible binding for '<<-' assignment to 'plotFunction' Met.PLS3D : f2a: no visible global function definition for 'plotFunction' Met.PLS3D : f2a : change.color.bakground : onOK: no visible global function definition for 'plotFunction' Met.PLS3D : f2a : change.color.bakground : onCancel: no visible binding for '<<-' assignment to 'ReturnVal' Met.PLS3D : f2a : by.name: no visible global function definition for 'plotFunction' Met.PLS3D : f2a : by.type: no visible binding for global variable 'categoria' Met.PLS3D : f2a : by.type: no visible global function definition for 'plotFunction' Met.PLS3D : f2a : modalDialog4 : onOK: no visible global function definition for 'plotFunction' Met.PLS3D : f2a : Text.size : onOK: no visible global function definition for 'plotFunction' Met.PLS3D : f2a : Text.size : onCancel: no visible binding for '<<-' assignment to 'ReturnVal' Met.PLS3D : f2a : Text.size: no visible binding for global variable 'ReturnVal' Met.PLS3D : f2a : CopyToClip: no visible global function definition for 'plotFunction' Met.PLS3D : f2a : Angle : onOK: no visible global function definition for 'plotFunction' Met.PLS3D : f2a : Angle : onCancel: no visible binding for '<<-' assignment to 'ReturnVal' Met.Save.Data: no visible binding for global variable 'datos' Met.Selection: no visible binding for global variable 'console' Met.Selection : Met.radio_seleccion2 : onOK: no visible binding for '<<-' assignment to 'categoria2' Met.Selection : Met.radio_seleccion2 : onOK: no visible binding for global variable 'categoria2' Met.Selection : Met.radio_seleccion2 : onCancel: no visible binding for '<<-' assignment to 'categoria2' Met.Selection: no visible binding for '<<-' assignment to 'clase1' Met.Selection: no visible binding for '<<-' assignment to 'clase2' Met.Selection: no visible binding for '<<-' assignment to 'clase3' Met.Selection: no visible binding for '<<-' assignment to 'clase4' Met.Selection: no visible binding for global variable 'categoria2' Met.Selection: no visible binding for global variable 'categoria3' Met.Selection: no visible binding for '<<-' assignment to 'externa' Met.Selection: no visible binding for '<<-' assignment to 'memory' Met.Selection: no visible binding for global variable 'memory' Met.Selection: no visible binding for '<<-' assignment to 'memory.data' Met.Selection: no visible binding for global variable 'memory.data' Met.Show: no visible binding for global variable 'datos' Met.delete: no visible binding for global variable 'console' Met.delete: no visible binding for '<<-' assignment to 'memory' Met.delete: no visible binding for global variable 'memory' Met.delete : Met.spectrum2 : change.color.bakground : onCancel: no visible binding for '<<-' assignment to 'ReturnVal' Met.delete : Met.spectrum2 : change.espectrum : onCancel: no visible binding for '<<-' assignment to 'ReturnVal' Met.delete : Met.spectrum2 : Zoom : onCancel: no visible binding for '<<-' assignment to 'ReturnVal' Met.delete : Met.spectrum2 : Text.size : onCancel: no visible binding for '<<-' assignment to 'ReturnVal' Met.delete : Met.spectrum2 : Text.size: no visible binding for global variable 'ReturnVal' Met.delete : list.spectrum: no visible binding for global variable 'datos' Met.delete : list.spectrum : onOK: no visible binding for '<<-' assignment to 'datos' Met.delete : list.spectrum : onOK: no visible binding for global variable 'datos' Met.delete: no visible binding for global variable 'datos' Met.delete: no visible binding for '<<-' assignment to 'memory.data' Met.delete: no visible binding for global variable 'memory.data' Met.model.1 : OnOK: no visible binding for '<<-' assignment to 'm.model' Met.peak.detection: no visible binding for global variable 'console' Met.peak.detection : Met.model : onOK: no visible binding for '<<-' assignment to 'peak.parameters' Met.peak.detection : Met.model : onCancel: no visible binding for '<<-' assignment to 'ReturnVal' Met.peak.detection: no visible binding for global variable 'peak.parameters' Met.peak.detection: no visible binding for '<<-' assignment to 'Peaks' Met.peak.detection: no visible binding for global variable 'Peaks' Met.redo: no visible binding for global variable 'memory.data' Met.redo: no visible binding for '<<-' assignment to 'datos' Met.redo: no visible binding for global variable 'datos' Met.spectrum: no visible binding for global variable 'console' Met.spectrum : change.color.bakground : onCancel: no visible binding for '<<-' assignment to 'ReturnVal' Met.spectrum : change.espectrum : onCancel: no visible binding for '<<-' assignment to 'ReturnVal' Met.spectrum : Zoom : onCancel: no visible binding for '<<-' assignment to 'ReturnVal' Met.spectrum : Text.size : onCancel: no visible binding for '<<-' assignment to 'ReturnVal' Met.spectrum : Text.size: no visible binding for global variable 'ReturnVal' Met.spectrum.2: no visible binding for global variable 'console' Met.spectrum.2: no visible binding for global variable 'C.Shift' Met.spectrum.2 : Met.reference: no visible binding for global variable 'xPlotCoord' Met.spectrum.2 : OnLeftClick: no visible binding for '<<-' assignment to 'xPlotCoord' Met.spectrum.2 : change.color.bakground : onCancel: no visible binding for '<<-' assignment to 'ReturnVal' Met.spectrum.2 : Zoom : onCancel: no visible binding for '<<-' assignment to 'ReturnVal' Met.spectrum.2 : Text.size : onCancel: no visible binding for '<<-' assignment to 'ReturnVal' Met.spectrum.2 : Text.size: no visible binding for global variable 'ReturnVal' Met.spectrum.2 : onok: no visible binding for '<<-' assignment to 'C.Shift' Met.spectrum.2 : c.spectrum: no visible global function definition for 'change.espectrum' Met.spectrum.2 : superimpose: no visible global function definition for 'change.espectrum' Met.undo: no visible binding for global variable 'memory' Met.undo: no visible binding for '<<-' assignment to 'memory' Met.undo: no visible binding for '<<-' assignment to 'datos' Met.undo: no visible binding for global variable 'memory.data' Met.undo: no visible binding for global variable 'datos' Metabonomic: no visible binding for '<<-' assignment to 'memory.data' Metabonomic : .exit: no visible binding for global variable 'console' Metabonomic : Met.stop: no visible binding for global variable 'console' Metabonomic: no visible binding for '<<-' assignment to 'console' Metabonomic: no visible binding for global variable 'console' Metabonomic : : no visible binding for global variable 'datos' Metabonomic : : no visible binding for global variable 'externa' Metabonomic : : no visible binding for global variable 'Peaks' Metabonomic : : no visible binding for global variable 'memory.data' Phase.correction : Met.FID : Zoom : onCancel: no visible binding for '<<-' assignment to 'ReturnVal' Phase.correction : Met.FID : Met.reference: no visible binding for global variable 'xPlotCoord' Phase.correction : Met.FID : OnLeftClick: no visible binding for '<<-' assignment to 'xPlotCoord' Phase.correction : Met.FID : Pivot : onCancel: no visible binding for '<<-' assignment to 'ReturnVal' Phase.correction : Met.FID : onok: no visible binding for '<<-' assignment to 'spect.fid' Phase.correction: no visible binding for global variable 'file.out' Phase.correction: no visible binding for global variable 'spect.fid' Phase.correction: no visible binding for '<<-' assignment to 'memory.data' Phase.correction: no visible binding for global variable 'memory.data' Phase.correction: no visible binding for global variable 'memory' Try: no visible binding for global variable 'console' manual.model: no visible binding for global variable 'datos' manual.model: no visible binding for '<<-' assignment to 'Index' manual.model : onOK: no visible binding for '<<-' assignment to 'samp' manual.model : onOK: no visible binding for global variable 'Index' manual.model : DeleteSelection: no visible binding for '<<-' assignment to 'Index' manual.model : DeleteSelection: no visible binding for global variable 'Index' manual.model : DeleteSelection: no visible binding for global variable 'datos' Found possibly global 'T' or 'F' in the following functions: Baseline.Correction Import.data Manual.cut Met.B.STAT Met.KNN Met.LDA Met.LDA.multi Met.LDA.multi2 Met.NN1 Met.NN2 Met.PCA Met.PLS1 Met.PLS2 Met.PLS2.multi Met.PLS2.multi2 Met.PLS3D Met.delete Met.peak.detection Met.spectrum Met.spectrum.2 Phase.correction * checking Rd files ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * creating Metabonomic-Ex.R ... OK * checking examples ... OK * creating Metabonomic-manual.tex ... OK * checking Metabonomic-manual.tex using pdflatex ... OK