* using log directory 'd:/Rcompile/CRANpkg/local/2.8/RBGL.Rcheck' * using R version 2.8.1 (2008-12-22) * using session charset: ISO8859-1 * checking for file 'RBGL/DESCRIPTION' ... OK * this is package 'RBGL' version '1.20.0' * checking package name space information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking whether package 'RBGL' can be installed ... ERROR Installation failed. The installation logfile: Using auto-selected zip options ' RBGL-HELP=ziponly' ---------- Making package RBGL ------------ untarring boost include tree... adding build stamp to DESCRIPTION installing NAMESPACE file and metadata making DLL ... making bbc.d from bbc.cpp making cliques.d from cliques.cpp making clusteringCoef.d from clusteringCoef.cpp making dominatorTree.d from dominatorTree.cpp making hcs.d from hcs.cpp making incrConnComp.d from incrConnComp.cpp making interfaces.d from interfaces.cpp making layout.d from layout.cpp making minST.d from minST.cpp making mincut.d from mincut.cpp making ordering.d from ordering.cpp making shortestPath.d from shortestPath.cpp making sna.d from sna.cpp making transitive_closure.d from transitive_closure.cpp making wavefront.d from wavefront.cpp g++ -Id:/Rcompile/recent/R-28~1.1/include -IboostIncl -O2 -Wall -c bbc.cpp -o bbc.o boostIncl/boost/graph/dijkstra_shortest_paths.hpp: In function 'void boost::detail::dijkstra_dispatch2(const VertexListGraph&, typename boost::graph_traits::vertex_descriptor, DistanceMap, WeightMap, IndexMap, const Params&, ColorMap) [with VertexListGraph = boost::adjacency_list >, boost::property >, boost::no_property, boost::listS>, DistanceMap = boost::iterator_property_map<__gnu_cxx::__normal_iterator > >, boost::vec_adj_list_vertex_id_map >, unsigned int>, double, double&>, WeightMap = boost::adj_list_edge_property_map >, boost::edge_weight_t>, IndexMap = boost::vec_adj_list_vertex_id_map >, unsigned int>, Params = boost::bgl_named_params >, boost::property >, boost::no_property, boost::listS>, boost::adj_list_edge_property_map >, boost::edge_weight_t>, boost::iterator_property_map<__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > >, std::allocator, std::allocator > > > > >, boost::vec_adj_list_vertex_id_map >, unsigned int>, std::vector, std::allocator > >, std::vector, std::allocator > >&>, boost::iterator_property_map<__gnu_cxx::__normal_iterator > >, boost::vec_adj_list_vertex_id_map >, unsigned int>, double, double&>, boost::iterator_property_map<__gnu_cxx::__normal_iterator > >, boost::vec_adj_list_vertex_id_map >, unsigned int>, long long unsigned int, long long unsigned int&> >, boost::graph_visitor_t, boost::bgl_named_params > >, boost::vec_adj_list_vertex_id_map >, unsigned int>, double, double&>, boost::vertex_distance_t, boost::bgl_named_params >, unsigned int>, boost::vertex_index_t, boost::bgl_named_params >, boost::edge_weight_t>, boost::edge_weight_t, boost::no_property> > > >, ColorMap = boost::iterator_property_map<__gnu_cxx::__normal_iterator > >, boost::vec_adj_list_vertex_id_map >, unsigned int>, boost::default_color_type, boost::default_color_type&>]': boostIncl/boost/graph/dijkstra_shortest_paths.hpp:81: warning: 'bfs_vis.boost::detail::dijkstra_bfs_visitor >, boost::property >, boost::no_property, boost::listS>, boost::adj_list_edge_property_map >, boost::edge_weight_t>, boost::iterator_property_map<__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > >, std::allocator, std::allocator > > > > >, boost::vec_adj_list_vertex_id_map >, unsigned int>, std::vector, std::allocator > >, std::vector, std::allocator > >&>, boost::iterator_property_map<__gnu_cxx::__normal_iterator > >, boost::vec_adj_list_vertex_id_map >, unsigned int>, double, double&>, boost::iterator_property_map<__gnu_cxx::__normal_iterator > >, boost::vec_adj_list_vertex_id_map >, unsigned int>, long long unsigned int, long long unsigned int&> >, boost::relaxed_heap > >, boost::vec_adj_list_vertex_id_map >, unsigned int>, double, double&>, std::less >, boost::vec_adj_list_vertex_id_map >, unsigned int> >, boost::adj_list_edge_property_map >, boost::edge_weight_t>, boost::dummy_property_map, boost::iterator_property_map<__gnu_cxx::__normal_iterator > >, boost::vec_adj_list_vertex_id_map >, unsigned int>, double, double&>, boost::closed_plus, std::less >::m_decreased' is used uninitialized in this function boostIncl/boost/graph/dijkstra_shortest_paths.hpp:205: note: 'bfs_vis.boost::detail::dijkstra_bfs_visitor >, boost::property >, boost::no_property, boost::listS>, boost::adj_list_edge_property_map >, boost::edge_weight_t>, boost::iterator_property_map<__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > >, std::allocator, std::allocator > > > > >, boost::vec_adj_list_vertex_id_map >, unsigned int>, std::vector, std::allocator > >, std::vector, std::allocator > >&>, boost::iterator_property_map<__gnu_cxx::__normal_iterator > >, boost::vec_adj_list_vertex_id_map >, unsigned int>, double, double&>, boost::iterator_property_map<__gnu_cxx::__normal_iterator > >, boost::vec_adj_list_vertex_id_map >, unsigned int>, long long unsigned int, long long unsigned int&> >, boost::relaxed_heap > >, boost::vec_adj_list_vertex_id_map >, unsigned int>, double, double&>, std::less >, boost::vec_adj_list_vertex_id_map >, unsigned int> >, boost::adj_list_edge_property_map >, boost::edge_weight_t>, boost::dummy_property_map, boost::iterator_property_map<__gnu_cxx::__normal_iterator > >, boost::vec_adj_list_vertex_id_map >, unsigned int>, double, double&>, boost::closed_plus, std::less >::m_decreased' was declared here g++ -Id:/Rcompile/recent/R-28~1.1/include -IboostIncl -O2 -Wall -c cliques.cpp -o cliques.o g++ -Id:/Rcompile/recent/R-28~1.1/include -IboostIncl -O2 -Wall -c clusteringCoef.cpp -o clusteringCoef.o g++ -Id:/Rcompile/recent/R-28~1.1/include -IboostIncl -O2 -Wall -c dominatorTree.cpp -o dominatorTree.o g++ -Id:/Rcompile/recent/R-28~1.1/include -IboostIncl -O2 -Wall -c hcs.cpp -o hcs.o boostIncl/boost/graph/detail/adjacency_list.hpp: In function 'typename boost::graph_traits::edges_size_type boost::min_cut(VertexListGraph&, OutputIterator, OutputIterator) [with VertexListGraph = const R_adjacency_list, OutputIterator = std::back_insert_iterator > >]': boostIncl/boost/graph/detail/adjacency_list.hpp:270: warning: 'p.boost::property, boost::no_property> > >::.boost::property, boost::no_property> >::.boost::property, boost::no_property>::m_value.boost::detail::edge_desc_impl::.boost::detail::edge_base::m_target' is used uninitialized in this function boostIncl/boost/graph/detail/adjacency_list.hpp:2210: note: 'p.boost::property, boost::no_property> > >::.boost::property, boost::no_property> >::.boost::property, boost::no_property>::m_value.boost::detail::edge_desc_impl::.boost::detail::edge_base::m_target' was declared here boostIncl/boost/graph/detail/adjacency_list.hpp:270: warning: 'p.boost::property, boost::no_property> > >::.boost::property, boost::no_property> >::.boost::property, boost::no_property>::m_value.boost::detail::edge_desc_impl::.boost::detail::edge_base::m_source' is used uninitialized in this function boostIncl/boost/graph/detail/adjacency_list.hpp:2210: note: 'p.boost::property, boost::no_property> > >::.boost::property, boost::no_property> >::.boost::property, boost::no_property>::m_value.boost::detail::edge_desc_impl::.boost::detail::edge_base::m_source' was declared here boostIncl/boost/graph/detail/adjacency_list.hpp:270: warning: 'p.boost::property, boost::no_property> > >::.boost::property, boost::no_property> >::.boost::property, boost::no_property>::m_value.boost::detail::edge_desc_impl::.boost::detail::edge_base::m_target' is used uninitialized in this function boostIncl/boost/graph/detail/adjacency_list.hpp:2210: note: 'p.boost::property, boost::no_property> > >::.boost::property, boost::no_property> >::.boost::property, boost::no_property>::m_value.boost::detail::edge_desc_impl::.boost::detail::edge_base::m_target' was declared here boostIncl/boost/graph/detail/adjacency_list.hpp:270: warning: 'p.boost::property, boost::no_property> > >::.boost::property, boost::no_property> >::.boost::property, boost::no_property>::m_value.boost::detail::edge_desc_impl::.boost::detail::edge_base::m_source' is used uninitialized in this function boostIncl/boost/graph/detail/adjacency_list.hpp:2210: note: 'p.boost::property, boost::no_property> > >::.boost::property, boost::no_property> >::.boost::property, boost::no_property>::m_value.boost::detail::edge_desc_impl::.boost::detail::edge_base::m_source' was declared here boostIncl/boost/graph/edge_connectivity.hpp:32: warning: 'p' may be used uninitialized in this function boostIncl/boost/graph/edge_connectivity.hpp:32: note: 'p' was declared here g++ -Id:/Rcompile/recent/R-28~1.1/include -IboostIncl -O2 -Wall -c incrConnComp.cpp -o incrConnComp.o g++ -Id:/Rcompile/recent/R-28~1.1/include -IboostIncl -O2 -Wall -c interfaces.cpp -o interfaces.o boostIncl/boost/graph/detail/adjacency_list.hpp: In function 'typename boost::graph_traits::degree_size_type boost::edge_connectivity(VertexListGraph&, OutputIterator) [with VertexListGraph = Graph_ud, OutputIterator = std::back_insert_iterator, std::allocator > > >]': boostIncl/boost/graph/detail/adjacency_list.hpp:270: warning: 'p.boost::property, boost::no_property> > >::.boost::property, boost::no_property> >::.boost::property, boost::no_property>::m_value.boost::detail::edge_desc_impl::.boost::detail::edge_base::m_target' is used uninitialized in this function boostIncl/boost/graph/detail/adjacency_list.hpp:2210: note: 'p.boost::property, boost::no_property> > >::.boost::property, boost::no_property> >::.boost::property, boost::no_property>::m_value.boost::detail::edge_desc_impl::.boost::detail::edge_base::m_target' was declared here boostIncl/boost/graph/detail/adjacency_list.hpp:270: warning: 'p.boost::property, boost::no_property> > >::.boost::property, boost::no_property> >::.boost::property, boost::no_property>::m_value.boost::detail::edge_desc_impl::.boost::detail::edge_base::m_source' is used uninitialized in this function boostIncl/boost/graph/detail/adjacency_list.hpp:2210: note: 'p.boost::property, boost::no_property> > >::.boost::property, boost::no_property> >::.boost::property, boost::no_property>::m_value.boost::detail::edge_desc_impl::.boost::detail::edge_base::m_source' was declared here boostIncl/boost/graph/detail/adjacency_list.hpp:270: warning: 'p.boost::property, boost::no_property> > >::.boost::property, boost::no_property> >::.boost::property, boost::no_property>::m_value.boost::detail::edge_desc_impl::.boost::detail::edge_base::m_target' is used uninitialized in this function boostIncl/boost/graph/detail/adjacency_list.hpp:2210: note: 'p.boost::property, boost::no_property> > >::.boost::property, boost::no_property> >::.boost::property, boost::no_property>::m_value.boost::detail::edge_desc_impl::.boost::detail::edge_base::m_target' was declared here boostIncl/boost/graph/detail/adjacency_list.hpp:270: warning: 'p.boost::property, boost::no_property> > >::.boost::property, boost::no_property> >::.boost::property, boost::no_property>::m_value.boost::detail::edge_desc_impl::.boost::detail::edge_base::m_source' is used uninitialized in this function boostIncl/boost/graph/detail/adjacency_list.hpp:2210: note: 'p.boost::property, boost::no_property> > >::.boost::property, boost::no_property> >::.boost::property, boost::no_property>::m_value.boost::detail::edge_desc_impl::.boost::detail::edge_base::m_source' was declared here boostIncl/boost/graph/edge_connectivity.hpp:32: warning: 'p' may be used uninitialized in this function boostIncl/boost/graph/edge_connectivity.hpp:32: note: 'p' was declared here g++ -Id:/Rcompile/recent/R-28~1.1/include -IboostIncl -O2 -Wall -c layout.cpp -o layout.o layout.cpp: In function 'SEXPREC* BGL_layout_internal(E_LAYOUT_METHOD, SEXPREC*, SEXPREC*, SEXPREC*, SEXPREC*, SEXPREC*, SEXPREC*, SEXPREC*, SEXPREC*, SEXPREC*, SEXPREC*, SEXPREC*, SEXPREC*, SEXPREC*)': layout.cpp:116: warning: unused variable 'r' layout.cpp:117: warning: unused variable 'w' layout.cpp:118: warning: unused variable 'h' fruchterman_reingold.hpp: In function 'void boost::fruchterman_reingold_force_directed_layout(const Graph&, PositionMap, Dim, Dim, AttractiveForce, RepulsiveForce, ForcePairs, Cooling, DisplacementMap) [with Graph = boost::adjacency_list, boost::no_property> >, boost::property, boost::no_property, boost::listS>, PositionMap = boost::vec_adj_list_vertex_property_map, boost::no_property> >, boost::property, boost::no_property, boost::listS>, boost::adjacency_list, boost::no_property> >, boost::property, boost::no_property, boost::listS>*, boost::simple_point, boost::simple_point&, vertex_position_t>, Dim = double, AttractiveForce = boost::square_distance_attractive_force, RepulsiveForce = boost::square_distance_repulsive_force, ForcePairs = boost::grid_force_pairs, boost::no_property> >, boost::property, boost::no_property, boost::listS>, boost::adjacency_list, boost::no_property> >, boost::property, boost::no_property, boost::listS>*, boost::simple_point, boost::simple_point&, vertex_position_t> >, Cooling = boost::linear_cooling, DisplacementMap = boost::iterator_property_map<__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >, boost::vec_adj_list_vertex_id_map, boost::no_property> >, unsigned int>, boost::simple_point, boost::simple_point&>]': fruchterman_reingold.hpp:423: instantiated from 'static void boost::detail::fr_force_directed_layout::run(const Graph&, PositionMap, Dim, Dim, AttractiveForce, RepulsiveForce, ForcePairs, Cooling, boost::detail::error_property_not_found, const boost::bgl_named_params&) [with Graph = boost::adjacency_list, boost::no_property> >, boost::property, boost::no_property, boost::listS>, PositionMap = boost::vec_adj_list_vertex_property_map, boost::no_property> >, boost::property, boost::no_property, boost::listS>, boost::adjacency_list, boost::no_property> >, boost::property, boost::no_property, boost::listS>*, boost::simple_point, boost::simple_point&, vertex_position_t>, Dim = double, AttractiveForce = boost::square_distance_attractive_force, RepulsiveForce = boost::square_distance_repulsive_force, ForcePairs = boost::grid_force_pairs, boost::no_property> >, boost::property, boost::no_property, boost::listS>, boost::adjacency_list, boost::no_property> >, boost::property, boost::no_property, boost::listS>*, boost::simple_point, boost::simple_point&, vertex_position_t> >, Cooling = boost::linear_cooling, Param = boost::square_distance_attractive_force, Tag = boost::attractive_force_t, Rest = boost::no_property]' fruchterman_reingold.hpp:449: instantiated from 'void boost::fruchterman_reingold_force_directed_layout(const Graph&, PositionMap, Dim, Dim, const boost::bgl_named_params&) [with Graph = boost::adjacency_list, boost::no_property> >, boost::property, boost::no_property, boost::listS>, PositionMap = boost::vec_adj_list_vertex_property_map, boost::no_property> >, boost::property, boost::no_property, boost::listS>, boost::adjacency_list, boost::no_property> >, boost::property, boost::no_property, boost::listS>*, boost::simple_point, boost::simple_point&, vertex_position_t>, Dim = double, Param = boost::square_distance_attractive_force, Tag = boost::attractive_force_t, Rest = boost::no_property]' fruchterman_reingold.hpp:470: instantiated from 'void boost::fruchterman_reingold_force_directed_layout(const Graph&, PositionMap, Dim, Dim) [with Graph = IndexGraph, PositionMap = boost::vec_adj_list_vertex_property_map, boost::no_property> >, boost::property, boost::no_property, boost::listS>, boost::adjacency_list, boost::no_property> >, boost::property, boost::no_property, boost::listS>*, boost::simple_point, boost::simple_point&, vertex_position_t>, Dim = double]' layout.cpp:112: instantiated from here fruchterman_reingold.hpp:354: warning: suggest parentheses around assignment used as truth value boostIncl/boost/graph/dijkstra_shortest_paths.hpp: In function 'bool boost::johnson_all_pairs_shortest_paths(VertexAndEdgeListGraph&, DistanceMatrix&, VertexID, Weight, const BinaryPredicate&, const BinaryFunction&, const Infinity&, DistanceZero) [with VertexAndEdgeListGraph = const boost::adjacency_list, boost::no_property> >, boost::property, boost::no_property, boost::listS>, DistanceMatrix = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >, VertexID = boost::vec_adj_list_vertex_id_map, boost::no_property> >, unsigned int>, Weight = boost::adj_list_edge_property_map, boost::edge_weight_t>, BinaryPredicate = std::less, BinaryFunction = boost::closed_plus, Infinity = double, DistanceZero = double]': boostIncl/boost/graph/dijkstra_shortest_paths.hpp:81: warning: 'bfs_vis.boost::detail::dijkstra_bfs_visitor, boost::relaxed_heap, boost::property >, boost::no_property, boost::listS>, boost::adjacency_list, boost::property >, boost::no_property, boost::listS>*, double, double&, boost::vertex_distance_t>, std::less >, boost::vec_adj_list_vertex_id_map, unsigned int> >, boost::adj_list_edge_property_map >, boost::edge_weight2_t>, boost::dummy_property_map, boost::vec_adj_list_vertex_property_map, boost::property >, boost::no_property, boost::listS>, boost::adjacency_list, boost::property >, boost::no_property, boost::listS>*, double, double&, boost::vertex_distance_t>, boost::closed_plus, std::less >::m_decreased' is used uninitialized in this function boostIncl/boost/graph/dijkstra_shortest_paths.hpp:205: note: 'bfs_vis.boost::detail::dijkstra_bfs_visitor, boost::relaxed_heap, boost::property >, boost::no_property, boost::listS>, boost::adjacency_list, boost::property >, boost::no_property, boost::listS>*, double, double&, boost::vertex_distance_t>, std::less >, boost::vec_adj_list_vertex_id_map, unsigned int> >, boost::adj_list_edge_property_map >, boost::edge_weight2_t>, boost::dummy_property_map, boost::vec_adj_list_vertex_property_map, boost::property >, boost::no_property, boost::listS>, boost::adjacency_list, boost::property >, boost::no_property, boost::listS>*, double, double&, boost::vertex_distance_t>, boost::closed_plus, std::less >::m_decreased' was declared here g++ -Id:/Rcompile/recent/R-28~1.1/include -IboostIncl -O2 -Wall -c minST.cpp -o minST.o g++ -Id:/Rcompile/recent/R-28~1.1/include -IboostIncl -O2 -Wall -c mincut.cpp -o mincut.o boostIncl/boost/graph/push_relabel_max_flow.hpp: In member function 'void boost::detail::push_relabel::discharge(typename boost::graph_traits::vertex_descriptor) [with Graph = boost::adjacency_list, boost::no_property> > >, boost::no_property, boost::listS>, EdgeCapacityMap = boost::adj_list_edge_property_map, boost::no_property> > >, boost::edge_capacity_t>, ResidualCapacityEdgeMap = boost::adj_list_edge_property_map, boost::no_property> > >, boost::edge_residual_capacity_t>, ReverseEdgeMap = boost::adj_list_edge_property_map, const boost::detail::edge_desc_impl&, unsigned int, const boost::property, boost::no_property> > >, boost::edge_reverse_t>, VertexIndexMap = boost::vec_adj_list_vertex_id_map, FlowValue = double]': boostIncl/boost/graph/push_relabel_max_flow.hpp:340: warning: 'min_edge_iter.boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator, boost::no_property> > > >*, std::vector, boost::no_property> > > >, std::allocator, boost::no_property> > > > > > >, unsigned int, boost::detail::edge_desc_impl, int>::m_src' may be used uninitialized in this function boostIncl/boost/graph/push_relabel_max_flow.hpp:340: note: 'min_edge_iter.boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator, boost::no_property> > > >*, std::vector, boost::no_property> > > >, std::allocator, boost::no_property> > > > > > >, unsigned int, boost::detail::edge_desc_impl, int>::m_src' was declared here boostIncl/boost/graph/detail/adjacency_list.hpp: In function 'SEXPREC* BGL_max_flow_internal(SEXPREC*, SEXPREC*, SEXPREC*, SEXPREC*, SEXPREC*, SEXPREC*, E_MF_METHOD)': boostIncl/boost/graph/detail/adjacency_list.hpp:270: warning: 'p.boost::property, boost::no_property> > >::.boost::property, boost::no_property> >::.boost::property, boost::no_property>::m_value.boost::detail::edge_desc_impl::.boost::detail::edge_base::m_target' is used uninitialized in this function boostIncl/boost/graph/detail/adjacency_list.hpp:2210: note: 'p.boost::property, boost::no_property> > >::.boost::property, boost::no_property> >::.boost::property, boost::no_property>::m_value.boost::detail::edge_desc_impl::.boost::detail::edge_base::m_target' was declared here boostIncl/boost/graph/detail/adjacency_list.hpp:270: warning: 'p.boost::property, boost::no_property> > >::.boost::property, boost::no_property> >::.boost::property, boost::no_property>::m_value.boost::detail::edge_desc_impl::.boost::detail::edge_base::m_source' is used uninitialized in this function boostIncl/boost/graph/detail/adjacency_list.hpp:2210: note: 'p.boost::property, boost::no_property> > >::.boost::property, boost::no_property> >::.boost::property, boost::no_property>::m_value.boost::detail::edge_desc_impl::.boost::detail::edge_base::m_source' was declared here boostIncl/boost/graph/detail/adjacency_list.hpp:270: warning: 'p.boost::property, boost::no_property> > >::.boost::property, boost::no_property> >::.boost::property, boost::no_property>::m_value.boost::detail::edge_desc_impl::.boost::detail::edge_base::m_target' is used uninitialized in this function boostIncl/boost/graph/detail/adjacency_list.hpp:2210: note: 'p.boost::property, boost::no_property> > >::.boost::property, boost::no_property> >::.boost::property, boost::no_property>::m_value.boost::detail::edge_desc_impl::.boost::detail::edge_base::m_target' was declared here boostIncl/boost/graph/detail/adjacency_list.hpp:270: warning: 'p.boost::property, boost::no_property> > >::.boost::property, boost::no_property> >::.boost::property, boost::no_property>::m_value.boost::detail::edge_desc_impl::.boost::detail::edge_base::m_source' is used uninitialized in this function boostIncl/boost/graph/detail/adjacency_list.hpp:2210: note: 'p.boost::property, boost::no_property> > >::.boost::property, boost::no_property> >::.boost::property, boost::no_property>::m_value.boost::detail::edge_desc_impl::.boost::detail::edge_base::m_source' was declared here boostIncl/boost/graph/detail/adjacency_list.hpp: In function 'typename boost::graph_traits::edges_size_type boost::min_cut(VertexListGraph&, OutputIterator, OutputIterator) [with VertexListGraph = Graph_ud, OutputIterator = std::back_insert_iterator > >]': boostIncl/boost/graph/detail/adjacency_list.hpp:270: warning: 'p.boost::property, boost::no_property> > >::.boost::property, boost::no_property> >::.boost::property, boost::no_property>::m_value.boost::detail::edge_desc_impl::.boost::detail::edge_base::m_target' is used uninitialized in this function boostIncl/boost/graph/detail/adjacency_list.hpp:2210: note: 'p.boost::property, boost::no_property> > >::.boost::property, boost::no_property> >::.boost::property, boost::no_property>::m_value.boost::detail::edge_desc_impl::.boost::detail::edge_base::m_target' was declared here boostIncl/boost/graph/detail/adjacency_list.hpp:270: warning: 'p.boost::property, boost::no_property> > >::.boost::property, boost::no_property> >::.boost::property, boost::no_property>::m_value.boost::detail::edge_desc_impl::.boost::detail::edge_base::m_source' is used uninitialized in this function boostIncl/boost/graph/detail/adjacency_list.hpp:2210: note: 'p.boost::property, boost::no_property> > >::.boost::property, boost::no_property> >::.boost::property, boost::no_property>::m_value.boost::detail::edge_desc_impl::.boost::detail::edge_base::m_source' was declared here boostIncl/boost/graph/detail/adjacency_list.hpp:270: warning: 'p.boost::property, boost::no_property> > >::.boost::property, boost::no_property> >::.boost::property, boost::no_property>::m_value.boost::detail::edge_desc_impl::.boost::detail::edge_base::m_target' is used uninitialized in this function boostIncl/boost/graph/detail/adjacency_list.hpp:2210: note: 'p.boost::property, boost::no_property> > >::.boost::property, boost::no_property> >::.boost::property, boost::no_property>::m_value.boost::detail::edge_desc_impl::.boost::detail::edge_base::m_target' was declared here boostIncl/boost/graph/detail/adjacency_list.hpp:270: warning: 'p.boost::property, boost::no_property> > >::.boost::property, boost::no_property> >::.boost::property, boost::no_property>::m_value.boost::detail::edge_desc_impl::.boost::detail::edge_base::m_source' is used uninitialized in this function boostIncl/boost/graph/detail/adjacency_list.hpp:2210: note: 'p.boost::property, boost::no_property> > >::.boost::property, boost::no_property> >::.boost::property, boost::no_property>::m_value.boost::detail::edge_desc_impl::.boost::detail::edge_base::m_source' was declared here boostIncl/boost/graph/edge_connectivity.hpp:32: warning: 'p' may be used uninitialized in this function boostIncl/boost/graph/edge_connectivity.hpp:32: note: 'p' was declared here g++ -Id:/Rcompile/recent/R-28~1.1/include -IboostIncl -O2 -Wall -c ordering.cpp -o ordering.o g++ -Id:/Rcompile/recent/R-28~1.1/include -IboostIncl -O2 -Wall -c shortestPath.cpp -o shortestPath.o boostIncl/boost/graph/dijkstra_shortest_paths.hpp: In function 'bool boost::johnson_all_pairs_shortest_paths(VertexAndEdgeListGraph&, DistanceMatrix&, VertexID, Weight, const BinaryPredicate&, const BinaryFunction&, const Infinity&, DistanceZero) [with VertexAndEdgeListGraph = R_adjacency_list, DistanceMatrix = Basic2DMatrix, VertexID = boost::vec_adj_list_vertex_id_map, unsigned int>, Weight = boost::adj_list_edge_property_map, boost::edge_weight_t>, BinaryPredicate = std::less, BinaryFunction = boost::closed_plus, Infinity = double, DistanceZero = double]': boostIncl/boost/graph/dijkstra_shortest_paths.hpp:81: warning: 'bfs_vis.boost::detail::dijkstra_bfs_visitor, boost::relaxed_heap, boost::property >, boost::no_property, boost::listS>, boost::adjacency_list, boost::property >, boost::no_property, boost::listS>*, double, double&, boost::vertex_distance_t>, std::less >, boost::vec_adj_list_vertex_id_map, unsigned int> >, boost::adj_list_edge_property_map >, boost::edge_weight2_t>, boost::dummy_property_map, boost::vec_adj_list_vertex_property_map, boost::property >, boost::no_property, boost::listS>, boost::adjacency_list, boost::property >, boost::no_property, boost::listS>*, double, double&, boost::vertex_distance_t>, boost::closed_plus, std::less >::m_decreased' is used uninitialized in this function boostIncl/boost/graph/dijkstra_shortest_paths.hpp:205: note: 'bfs_vis.boost::detail::dijkstra_bfs_visitor, boost::relaxed_heap, boost::property >, boost::no_property, boost::listS>, boost::adjacency_list, boost::property >, boost::no_property, boost::listS>*, double, double&, boost::vertex_distance_t>, std::less >, boost::vec_adj_list_vertex_id_map, unsigned int> >, boost::adj_list_edge_property_map >, boost::edge_weight2_t>, boost::dummy_property_map, boost::vec_adj_list_vertex_property_map, boost::property >, boost::no_property, boost::listS>, boost::adjacency_list, boost::property >, boost::no_property, boost::listS>*, double, double&, boost::vertex_distance_t>, boost::closed_plus, std::less >::m_decreased' was declared here g++ -Id:/Rcompile/recent/R-28~1.1/include -IboostIncl -O2 -Wall -c sna.cpp -o sna.o boostIncl/boost/graph/detail/adjacency_list.hpp: In function 'SEXPREC* lambdaSets(SEXPREC*, SEXPREC*, SEXPREC*, SEXPREC*)': boostIncl/boost/graph/detail/adjacency_list.hpp:270: warning: 'p.boost::property, boost::no_property> > >::.boost::property, boost::no_property> >::.boost::property, boost::no_property>::m_value.boost::detail::edge_desc_impl::.boost::detail::edge_base::m_target' is used uninitialized in this function boostIncl/boost/graph/detail/adjacency_list.hpp:2210: note: 'p.boost::property, boost::no_property> > >::.boost::property, boost::no_property> >::.boost::property, boost::no_property>::m_value.boost::detail::edge_desc_impl::.boost::detail::edge_base::m_target' was declared here boostIncl/boost/graph/detail/adjacency_list.hpp:270: warning: 'p.boost::property, boost::no_property> > >::.boost::property, boost::no_property> >::.boost::property, boost::no_property>::m_value.boost::detail::edge_desc_impl::.boost::detail::edge_base::m_source' is used uninitialized in this function boostIncl/boost/graph/detail/adjacency_list.hpp:2210: note: 'p.boost::property, boost::no_property> > >::.boost::property, boost::no_property> >::.boost::property, boost::no_property>::m_value.boost::detail::edge_desc_impl::.boost::detail::edge_base::m_source' was declared here boostIncl/boost/graph/detail/adjacency_list.hpp:270: warning: 'p.boost::property, boost::no_property> > >::.boost::property, boost::no_property> >::.boost::property, boost::no_property>::m_value.boost::detail::edge_desc_impl::.boost::detail::edge_base::m_target' is used uninitialized in this function boostIncl/boost/graph/detail/adjacency_list.hpp:2210: note: 'p.boost::property, boost::no_property> > >::.boost::property, boost::no_property> >::.boost::property, boost::no_property>::m_value.boost::detail::edge_desc_impl::.boost::detail::edge_base::m_target' was declared here boostIncl/boost/graph/detail/adjacency_list.hpp:270: warning: 'p.boost::property, boost::no_property> > >::.boost::property, boost::no_property> >::.boost::property, boost::no_property>::m_value.boost::detail::edge_desc_impl::.boost::detail::edge_base::m_source' is used uninitialized in this function boostIncl/boost/graph/detail/adjacency_list.hpp:2210: note: 'p.boost::property, boost::no_property> > >::.boost::property, boost::no_property> >::.boost::property, boost::no_property>::m_value.boost::detail::edge_desc_impl::.boost::detail::edge_base::m_source' was declared here boostIncl/boost/graph/dijkstra_shortest_paths.hpp: In function 'bool boost::johnson_all_pairs_shortest_paths(VertexAndEdgeListGraph&, DistanceMatrix&, VertexID, Weight, const BinaryPredicate&, const BinaryFunction&, const Infinity&, DistanceZero) [with VertexAndEdgeListGraph = R_adjacency_list, DistanceMatrix = Basic2DMatrix, VertexID = boost::vec_adj_list_vertex_id_map, unsigned int>, Weight = boost::adj_list_edge_property_map, boost::edge_weight_t>, BinaryPredicate = std::less, BinaryFunction = boost::closed_plus, Infinity = double, DistanceZero = double]': boostIncl/boost/graph/dijkstra_shortest_paths.hpp:81: warning: 'bfs_vis.boost::detail::dijkstra_bfs_visitor, boost::relaxed_heap, boost::property >, boost::no_property, boost::listS>, boost::adjacency_list, boost::property >, boost::no_property, boost::listS>*, double, double&, boost::vertex_distance_t>, std::less >, boost::vec_adj_list_vertex_id_map, unsigned int> >, boost::adj_list_edge_property_map >, boost::edge_weight2_t>, boost::dummy_property_map, boost::vec_adj_list_vertex_property_map, boost::property >, boost::no_property, boost::listS>, boost::adjacency_list, boost::property >, boost::no_property, boost::listS>*, double, double&, boost::vertex_distance_t>, boost::closed_plus, std::less >::m_decreased' is used uninitialized in this function boostIncl/boost/graph/dijkstra_shortest_paths.hpp:205: note: 'bfs_vis.boost::detail::dijkstra_bfs_visitor, boost::relaxed_heap, boost::property >, boost::no_property, boost::listS>, boost::adjacency_list, boost::property >, boost::no_property, boost::listS>*, double, double&, boost::vertex_distance_t>, std::less >, boost::vec_adj_list_vertex_id_map, unsigned int> >, boost::adj_list_edge_property_map >, boost::edge_weight2_t>, boost::dummy_property_map, boost::vec_adj_list_vertex_property_map, boost::property >, boost::no_property, boost::listS>, boost::adjacency_list, boost::property >, boost::no_property, boost::listS>*, double, double&, boost::vertex_distance_t>, boost::closed_plus, std::less >::m_decreased' was declared here g++ -Id:/Rcompile/recent/R-28~1.1/include -IboostIncl -O2 -Wall -c transitive_closure.cpp -o transitive_closure.o g++ -Id:/Rcompile/recent/R-28~1.1/include -IboostIncl -O2 -Wall -c wavefront.cpp -o wavefront.o windres --preprocessor="gcc -E -xc -DRC_INVOKED" -I d:/Rcompile/recent/R-28~1.1/include -i RBGL_res.rc -o RBGL_res.o g++ -shared -s -o RBGL.dll RBGL.def bbc.o cliques.o clusteringCoef.o dominatorTree.o hcs.o incrConnComp.o interfaces.o layout.o minST.o mincut.o ordering.o shortestPath.o sna.o transitive_closure.o wavefront.o RBGL_res.o -Ld:/Rcompile/recent/R-28~1.1/bin -lR ... DLL made installing DLL installing R files installing inst files installing data files preparing package RBGL for lazy loading Loading required package: graph Error in library.dynam(lib, package, package.lib) : shared library 'BioC_graph' not found Error: package 'graph' could not be loaded Execution halted make[3]: *** [lazyload] Error 1 make[2]: *** [all] Error 2 make[1]: *** [pkg-RBGL] Error 2 *** Installation of RBGL failed *** Removing 'd:/Rcompile/CRANpkg/lib/2.8/RBGL' Restoring previous 'd:/Rcompile/CRANpkg/lib/2.8/RBGL'