* using log directory 'd:/Rcompile/CRANpkg/local/2.9/vabayelMix.Rcheck' * using R version 2.9.2 Patched (2009-09-02 r49531) * using session charset: ISO8859-1 * checking for file 'vabayelMix/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'vabayelMix' version '0.3' * checking package dependencies ... OK * checking if this is a source package ... OK * checking whether package 'vabayelMix' can be installed ... OK * checking package directory ... OK * checking for portable file names ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking for unstated dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... NOTE CostKL: no visible binding for '<<-' assignment to 'sum1' CostKL: no visible binding for '<<-' assignment to 'sum2' CostKL: no visible binding for '<<-' assignment to 'sum3' CostKL: no visible binding for '<<-' assignment to 'sum4' CostKL: no visible binding for '<<-' assignment to 'sum5' CostKL: no visible binding for '<<-' assignment to 'sum6' CostKL: no visible binding for '<<-' assignment to 'sum7' CostKL: no visible binding for '<<-' assignment to 'sum8' CostKL: no visible binding for global variable 'sum1' CostKL: no visible binding for global variable 'sum2' CostKL: no visible binding for global variable 'sum3' CostKL: no visible binding for global variable 'sum4' CostKL: no visible binding for global variable 'sum5' CostKL: no visible binding for global variable 'sum6' CostKL: no visible binding for global variable 'sum7' CostKL: no visible binding for global variable 'sum8' Found possibly global 'T' or 'F' in the following functions: pack unbiasedKurt * checking Rd files ... OK * checking Rd files against version 2 parser ... WARNING *** error on file ./man/CostKL.Rd Error : ./man/CostKL.Rd:30: Unrecognized macro \item *** error on file ./man/MembProbFn2.Rd Error : ./man/MembProbFn2.Rd:28: Unrecognized macro \item *** error on file ./man/UpdateCatw.Rd Error : ./man/UpdateCatw.Rd:20: Unrecognized macro \item *** error on file ./man/UpdateMix.Rd Error : ./man/UpdateMix.Rd:27: Unrecognized macro \item *** error on file ./man/UseBasicPrior.Rd Error : ./man/UseBasicPrior.Rd:32: Unrecognized macro \item *** error on file ./man/vabayelMix.Rd Error : ./man/vabayelMix.Rd:54: Unrecognized macro \item problems found in 'CostKL.Rd', 'MembProbFn2.Rd', 'UpdateCatw.Rd', 'UpdateMix.Rd', 'UseBasicPrior.Rd', 'vabayelMix.Rd' * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking examples ... OK * checking PDF version of manual ... OK