* using log directory 'd:/Rcompile/CRANpkg/local/3.0/Geneland.Rcheck'
* using R version 3.0.1 (2013-05-16)
* using platform: x86_64-w64-mingw32 (64-bit)
* using session charset: ISO8859-1
* checking for file 'Geneland/DESCRIPTION' ... OK
* this is package 'Geneland' version '4.0.3'
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'Geneland' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* loading checks for arch 'i386'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
** checking loading without being on the library search path ... OK
* loading checks for arch 'x64'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
** checking loading without being on the library search path ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... NOTE
File 'Geneland/R/zzz.R':
  .onLoad calls:
    packageStartupMessage("\n")
    packageStartupMessage("ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo")
    packageStartupMessage("o        Geneland is loaded                                       o")
    packageStartupMessage("o                                                                 o")
    packageStartupMessage("o        * Please *                                               o")
    packageStartupMessage("o                                                                 o")
    packageStartupMessage("o        Register on                                              o")
    packageStartupMessage("o        http://www2.imm.dtu.dk/~gigu/Geneland/register.php       o")
    packageStartupMessage("o                                                                 o")
    packageStartupMessage("o        See manual on                                            o")
    packageStartupMessage("o        http://www2.imm.dtu.dk/~gigu/Geneland/#Manual            o")
    packageStartupMessage("o                                                                 o")
    packageStartupMessage("o        Type citation(\"Geneland\") for a quick citation guide     o")
    packageStartupMessage("o                                                                 o")
    packageStartupMessage("o        See http://www2.imm.dtu.dk/~gigu/Geneland/#              o")
    packageStartupMessage("o        for additional references                                o")
    packageStartupMessage("o                                                                 o")
    packageStartupMessage("o        This is Geneland-4.0.3                                   o")
    packageStartupMessage("o                                                                 o")
    packageStartupMessage("ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo")

See section 'Good practice' in '?.onAttach'.

Geneland.GUI : run : RunmcmcFmodel: no visible binding for '<<-'
  assignment to 'probs'
Geneland.GUI : run : RunmcmcFmodel: no visible binding for '<<-'
  assignment to 'pops'
Geneland.GUI : run : RunmcmcFmodel: no visible binding for '<<-'
  assignment to 'runs'
Geneland.GUI : run : RunmcmcFmodel : Sort: no visible binding for
  global variable 'probs'
Geneland.GUI : run : RunmcmcFmodel : Sort: no visible binding for
  global variable 'pops'
Geneland.GUI : run : RunmcmcFmodel : Sort: no visible binding for
  global variable 'runs'
Geneland.GUI : run : RunmcmcFmodel : Reburn: no visible binding for
  '<<-' assignment to 'probs'
Geneland.GUI : run : RunmcmcFmodel : Reburn: no visible binding for
  '<<-' assignment to 'pops'
Geneland.GUI : run : RunmcmcFmodel : Reburn: no visible binding for
  '<<-' assignment to 'runs'
Geneland.GUI : run : RunmcmcFmodel : Reburn: no visible binding for
  global variable 'runs'
Geneland.GUI : run : RunmcmcFmodel : Reburn: no visible binding for
  global variable 'pops'
Geneland.GUI : run : RunmcmcFmodel : Reburn: no visible binding for
  global variable 'probs'
Geneland.GUI : run : RunmcmcFmodel : Output: no visible binding for
  global variable 'runs'
Geneland.GUI : run : RunmcmcFmodel : mr: no visible binding for '<<-'
  assignment to 'pops'
Geneland.GUI : run : RunmcmcFmodel : mr: no visible binding for global
  variable 'pops'
Geneland.GUI : run : RunmcmcFmodel : mr: no visible binding for '<<-'
  assignment to 'probs'
Geneland.GUI : run : RunmcmcFmodel : mr: no visible binding for global
  variable 'probs'
Geneland.GUI : run : RunmcmcFmodel : mrafter: no visible binding for
  '<<-' assignment to 'runs'
Geneland.GUI : run : RunmcmcFmodel : mrafter: no visible binding for
  global variable 'runs'
Geneland.GUI : run : RunmcmcFmodel : mrafter: no visible binding for
  '<<-' assignment to 'pops'
Geneland.GUI : run : RunmcmcFmodel : mrafter: no visible binding for
  global variable 'pops'
Geneland.GUI : run : RunmcmcFmodel : mrafter: no visible binding for
  '<<-' assignment to 'probs'
Geneland.GUI : run : RunmcmcFmodel : mrafter: no visible binding for
  global variable 'probs'
Geneland.GUI : plot : EHybZon : DrawHib: no visible global function
  definition for 'matrix2string'
Geneland.GUI : SimnonIBD : runnonibd: no visible binding for '<<-'
  assignment to 'globaldiploidgenotypes'
Geneland.GUI : Convert : gltgp: no visible binding for global variable
  'globaldiploidgenotypes'
Geneland.GUI : SimIBD : runibd: no visible binding for '<<-' assignment
  to 'globaldiploidgenotypes'
Geneland.GUI : Nullify : gltgp: no visible binding for global variable
  'globaldiploidgenotypes'
Geneland.GUI : Nullify : gltgp: no visible binding for '<<-' assignment
  to 'globaldiploidgenotypes'
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking compiled code ... OK
* checking examples ...
** running examples for arch 'i386' ... OK
** running examples for arch 'x64' ... OK
* checking PDF version of manual ... OK
NOTE: There was 1 note.
See
  'd:/Rcompile/CRANpkg/local/3.0/Geneland.Rcheck/00check.log'
for details.