* using log directory 'd:/Rcompile/CRANpkg/local/3.0/PKtools.Rcheck'
* using R version 3.0.1 (2013-05-16)
* using platform: x86_64-w64-mingw32 (64-bit)
* using session charset: ISO8859-1
* checking for file 'PKtools/DESCRIPTION' ... OK
* this is package 'PKtools' version '1.5-0'
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'PKtools' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... NOTE
AICcomp: warning in matrix(NA, nr = n1, nc = 7): partial argument match
  of 'nr' to 'nrow'
AICcomp: warning in matrix(NA, nr = n1, nc = 7): partial argument match
  of 'nc' to 'ncol'
HTMLtools.NONMEM: warning in HTMLInitFile(outdir = nameDir, file =
  nameFile$file, extension = "html", BackGroundColor = "#E9967A"):
  partial argument match of 'file' to 'filename'
HTMLtools.PKNLME: warning in HTMLInitFile(outdir = nameDir, file =
  nameFile$file, extension = "html", BackGroundColor = "#E9967A"):
  partial argument match of 'file' to 'filename'
HTMLtools.WinBUGS: warning in HTMLInitFile(outdir = nameDir, file =
  nameFile & file, extension = "html", BackGroundColor = "#E9967A"):
  partial argument match of 'file' to 'filename'
RunNM: warning in pk(pkvar = data$pkvar, cov = data$cov, covnames =
  nameData$covnames): partial argument match of 'cov' to 'covdata'
coVar.id: warning in matrix(NA, nr = nid, nc = ncov): partial argument
  match of 'nr' to 'nrow'
coVar.id: warning in matrix(NA, nr = nid, nc = ncov): partial argument
  match of 'nc' to 'ncol'
pk: warning in matrix(NA, nr = nid, nc = ncov): partial argument match
  of 'nr' to 'nrow'
pk: warning in matrix(NA, nr = nid, nc = ncov): partial argument match
  of 'nc' to 'ncol'
bugs.plot: no visible binding for global variable 'n.sims'
bugs.run: no visible binding for '<<-' assignment to 'options.save'
bugs.run: no visible binding for global variable 'options.save'
bugs.run.error: no visible binding for global variable 'options.save'
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking sizes of PDF files under 'inst/doc' ... OK
* checking installed files from 'inst/doc' ... OK
* checking examples ... OK
* checking PDF version of manual ... OK
NOTE: There was 1 note.
See
  'd:/Rcompile/CRANpkg/local/3.0/PKtools.Rcheck/00check.log'
for details.