* using log directory 'd:/Rcompile/CRANpkg/local/3.0/oro.nifti.Rcheck'
* using R version 3.0.0 (2013-04-03)
* using platform: x86_64-w64-mingw32 (64-bit)
* using session charset: ISO8859-1
* checking for file 'oro.nifti/DESCRIPTION' ... OK
* this is package 'oro.nifti' version '0.3.9'
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'oro.nifti' can be installed ... OK
* checking installed package size ... NOTE
  installed size is  6.1Mb
  sub-directories of 1Mb or more:
    nifti   3.8Mb
* checking package directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking sizes of PDF files under 'inst/doc' ... OK
* checking installed files from 'inst/doc' ... OK
* checking examples ... OK
* checking differences from 'oro.nifti-Ex.Rout' to 'oro.nifti-Ex.Rout.save' ...
6c6
< > base::assign(".oldSearch", base::search(), pos = 'CheckExEnv')
---
> > assign(".oldSearch", search(), pos = 'CheckExEnv')
107a108
> Class "matrix", by class "array", distance 2, with explicit test and coerce
109a111
> Class "vector", by class "array", distance 5, with explicit test and coerce
159a162
> Class "matrix", by class "array", distance 2, with explicit test and coerce
161a165
> Class "vector", by class "array", distance 5, with explicit test and coerce
460c464
< [1] "FSL3.2beta; R version 3.0.0 (2013-04-03)"
---
> [1] "FSL3.2beta; R version 2.15.2 Patched (2012-12-18 r61375)"
539a544
> Class "matrix", by class "array", distance 2, with explicit test and coerce
541a547
> Class "vector", by class "array", distance 5, with explicit test and coerce
651a658
> Class "matrix", by class "niftiExtension", distance 4, with explicit test and coerce
653a661
> Class "vector", by class "niftiExtension", distance 7, with explicit test and coerce
713a722
> Class "matrix", by class "nifti", distance 3, with explicit test and coerce
715a725
> Class "vector", by class "nifti", distance 6, with explicit test and coerce
1135c1145
< > base::cat("Time elapsed: ", proc.time() - base::get("ptime", pos = 'CheckExEnv'),"\n")
---
> > cat("Time elapsed: ", proc.time() - get("ptime", pos = 'CheckExEnv'),"\n")
 OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in 'inst/doc' ... OK
* checking running R code from vignettes ... OK
* checking re-building of vignette PDFs ... OK
* checking PDF version of manual ... OK
NOTE: There was 1 note.
See
  'd:/Rcompile/CRANpkg/local/3.0/oro.nifti.Rcheck/00check.log'
for details.