* using log directory 'd:/Rcompile/CRANpkg/local/2.15/PBSmodelling.Rcheck'
* using R version 2.15.0 (2012-03-30)
* using platform: x86_64-pc-mingw32 (64-bit)
* using session charset: ISO8859-1
* checking for file 'PBSmodelling/DESCRIPTION' ... OK
* this is package 'PBSmodelling' version '2.63.229'
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking whether package 'PBSmodelling' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* loading checks for arch 'i386'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* loading checks for arch 'x64'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... NOTE
File 'PBSmodelling/R/zzz.r':
  .onLoad calls:
    cat("\nPBS Modelling", pkg_info$Version, "-- Copyright (C) 2005-2010 Fisheries and Oceans Canada\n\nA complete user guide 'PBSmodelling-UG.pdf' is located at \n",     userguide_path, "\n\nPackaged on", pkg_date, "\nPacific Biological Station, Nanaimo\n\n")
    cat("-------------------------------------------------------------\n")
    cat("ERROR: PBS Modelling requires the tcl package \"BWidget\"\nand cannot proceed until it is installed.\n")
    cat("Ubuntu (apt) users can install via the command:\n\tsudo apt-get install bwidget\n")
    cat("Bwidget source can be downloaded from http://sourceforge.net/projects/tcllib/files/\n\n")
    cat("ERROR: PBS Modelling requires the tcl package \"Tktable\"\nand cannot proceed until it is installed.\n")
    cat("Ubuntu (apt) users can install via the command:\n\tsudo apt-get install libtktable2.9\n")
    cat("Mac (port) users can install via the command:\n\tsudo port install tktable (assuming mac ports is installed)\n")
    cat("tktable can also be donwloaded from http://sourceforge.net/projects/tktable/files/\n\n")
    cat("-------------------------------------------------------------\n")

Package startup functions should use 'packageStartupMessage' to
  generate messages.
See section 'Good practice' in ?.onAttach.

.check.object.exists: warning in exists(widget$name, env =
  .PBSmod[[winName]]$env): partial argument match of 'env' to 'envir'
.createWidget.image: warning in get(widget$varname, env =
  .PBSmod[[winName]]$env): partial argument match of 'env' to 'envir'
.createWidget.object: warning in get(widget$name, env =
  .PBSmod[[winName]]$env): partial argument match of 'env' to 'envir'
.createWidget.slideplus : saveSlideBounds: no visible binding for
  global variable 'minVal'
.createWidget.slideplus : saveSlideBounds: no visible binding for
  global variable 'curVal'
.createWidget.slideplus : saveSlideBounds: no visible binding for
  global variable 'maxVal'
.dClose: no visible binding for global variable '.dwd'
.dClose: warning in ls(pos = 1, all = TRUE): partial argument match of
  'all' to 'all.names'
.dClose: no visible binding for global variable '.dls'
.extractData: warning in exists(command, mode = "function", env =
  .PBSmod[[winName]]$env): partial argument match of 'env' to 'envir'
.getPrefix: no visible binding for global variable 'prefix'
.getValueForWidgetSetup: warning in exists(varname, env =
  .PBSmod[[winName]]$env): partial argument match of 'env' to 'envir'
.getValueForWidgetSetup: warning in get(varname, env =
  .PBSmod[[winName]]$env): partial argument match of 'env' to 'envir'
.loadCRunComparison: no visible binding for global variable 'runs'
.sortHelperActive: no visible binding for global variable 'PBS.history'
.sortHelperActive: no visible binding for '<<-' assignment to
  'tmp.before'
.sortWidget : .done_sorting: no visible binding for global variable
  'PBS.history'
.sortWidget : .done_sorting: no visible binding for '<<-' assignment to
  'PBS.history'
.updateHistory: no visible binding for global variable 'PBS.history'
.updateHistoryButtons: no visible binding for global variable
  'PBS.history'
.viewPkgDemo: no visible binding for global variable 'OK'
addHistory: no visible binding for global variable 'PBS.history'
addHistory: no visible binding for '<<-' assignment to 'PBS.history'
backHistory: no visible binding for global variable 'PBS.history'
backHistory: no visible binding for '<<-' assignment to 'PBS.history'
calcMin : Sfun: no visible binding for '<<-' assignment to 'PBSmin'
calcMin : Sfun: no visible binding for global variable 'PBSmin'
calcMin: no visible binding for '<<-' assignment to 'PBSmin'
calcMin: no visible binding for global variable 'PBSmin'
clearHistory: no visible binding for global variable 'PBS.history'
clearHistory: no visible binding for '<<-' assignment to 'PBS.history'
createWin: no visible binding for global variable 'PBS.history'
createWin: no visible binding for '<<-' assignment to 'PBS.history'
createWin : .createMetaWidget.menu: no visible binding for global
  variable 'command'
exportHistory: no visible binding for global variable 'PBS.history'
firstHistory: no visible binding for global variable 'PBS.history'
forwHistory: no visible binding for global variable 'PBS.history'
forwHistory: no visible binding for '<<-' assignment to 'PBS.history'
getChoice: no visible binding for global variable 'blist'
getWinVal: warning in assign(key, vars[[key]], env = .GlobalEnv):
  partial argument match of 'env' to 'envir'
importHistory: no visible binding for global variable 'PBS.history'
importHistory: no visible binding for '<<-' assignment to 'PBS.history'
initHistory: warning in exists("PBS.history", env = .GlobalEnv):
  partial argument match of 'env' to 'envir'
initHistory: warning in get("PBS.history", env = .GlobalEnv): partial
  argument match of 'env' to 'envir'
initHistory: warning in assign("PBS.history", list(), env =
  .GlobalEnv): partial argument match of 'env' to 'envir'
initHistory: warning in assign("PBS.history", PBS.history, env =
  .GlobalEnv): partial argument match of 'env' to 'envir'
jumpHistory: no visible binding for global variable 'PBS.history'
jumpHistory: no visible binding for '<<-' assignment to 'PBS.history'
lastHistory: no visible binding for global variable 'PBS.history'
plotACF: warning in axis(1, at = 1:30, tcl = 0.25, label = FALSE):
  partial argument match of 'label' to 'labels'
rmHistory: no visible binding for global variable 'PBS.history'
rmHistory: no visible binding for '<<-' assignment to 'PBS.history'
runDemos: warning in ls(pos = 1, all = TRUE): partial argument match of
  'all' to 'all.names'
runDemos: no visible binding for global variable 'OK'
runExample : .runExHelperQuit: no visible binding for global variable
  '.cwd'
runExample : .runExHelperQuit: no visible binding for global variable
  '.cls'
runExample: warning in ls(pos = 1, all = TRUE): partial argument match
  of 'all' to 'all.names'
runExamples : .runExHelperQuit: no visible binding for global variable
  '.cwd'
runExamples : .runExHelperQuit: no visible binding for global variable
  '.cls'
runExamples: warning in ls(pos = 1, all = TRUE): partial argument match
  of 'all' to 'all.names'
showHelp: no visible binding for global variable 'remote'
showVignettes: warning in ls(pos = 1, all = TRUE): partial argument
  match of 'all' to 'all.names'
sortHistory: no visible binding for global variable 'PBS.history'
testWidgets : .testWidHelper: no visible binding for global variable
  'wN'
unpackList: warning in assign(namx[i], x[[i]], env = .GlobalEnv):
  partial argument match of 'env' to 'envir'
viewCode: no visible binding for global variable 'remote'
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking compiled code ... OK
* checking sizes of PDF files under 'inst/doc' ... OK
* checking installed files from 'inst/doc' ... OK
* checking examples ...
** running examples for arch 'i386' ... OK
** running examples for arch 'x64' ... OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in 'inst/doc' ... OK
* checking running R code from vignettes ... OK
* checking re-building of vignette PDFs ... OK
* checking PDF version of manual ... OK
NOTE: There was 1 note.
See
  'd:/Rcompile/CRANpkg/local/2.15/PBSmodelling.Rcheck/00check.log'
for details.