* using log directory 'd:/Rcompile/CRANpkg/local/2.15/ade4TkGUI.Rcheck' * using R version 2.15.0 (2012-03-30) * using platform: x86_64-pc-mingw32 (64-bit) * using session charset: ISO8859-1 * checking for file 'ade4TkGUI/DESCRIPTION' ... OK * this is package 'ade4TkGUI' version '0.2-5' * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... NOTE As from R 2.14.0 all packages need a namespace. One will be generated on installation, but it is better to handcraft a NAMESPACE file: R CMD build will produce a suitable starting point. CRAN requires a NAMESPACE file for all submissions. * checking whether package 'ade4TkGUI' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking for portable file names ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * loading checks for arch 'i386' ** checking whether the package can be loaded ... OK ** checking whether the package can be loaded with stated dependencies ... OK ** checking whether the package can be unloaded cleanly ... OK * loading checks for arch 'x64' ** checking whether the package can be loaded ... OK ** checking whether the package can be loaded with stated dependencies ... OK ** checking whether the package can be unloaded cleanly ... OK * checking for unstated dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... NOTE dialog.MCTests : execcomp: warning in deparse(cmd, width = 256): partial argument match of 'width' to 'width.cutoff' dialog.MCTests : execcomp: warning in deparse(cmd, width = 500): partial argument match of 'width' to 'width.cutoff' dialog.between : execcomp: warning in deparse(cmd, width = 256): partial argument match of 'width' to 'width.cutoff' dialog.between : execcomp: warning in deparse(cmd, width = 500): partial argument match of 'width' to 'width.cutoff' dialog.cca : execcomp: warning in deparse(cmd, width = 256): partial argument match of 'width' to 'width.cutoff' dialog.cca : execcomp: warning in deparse(cmd, width = 500): partial argument match of 'width' to 'width.cutoff' dialog.coinertia : execcomp: warning in deparse(cmd, width = 256): partial argument match of 'width' to 'width.cutoff' dialog.coinertia : execcomp: warning in deparse(cmd, width = 500): partial argument match of 'width' to 'width.cutoff' dialog.discrimin : execcomp: warning in deparse(cmd, width = 256): partial argument match of 'width' to 'width.cutoff' dialog.discrimin : execcomp: warning in deparse(cmd, width = 500): partial argument match of 'width' to 'width.cutoff' dialog.dpcoa : execcomp: warning in deparse(cmd, width = 256): partial argument match of 'width' to 'width.cutoff' dialog.dpcoa : execcomp: warning in deparse(cmd, width = 500): partial argument match of 'width' to 'width.cutoff' dialog.dudi.acm : execcomp: warning in deparse(cmd, width = 256): partial argument match of 'width' to 'width.cutoff' dialog.dudi.acm : execcomp: warning in deparse(cmd, width = 500): partial argument match of 'width' to 'width.cutoff' dialog.dudi.coa : execcomp: warning in deparse(cmd, width = 256): partial argument match of 'width' to 'width.cutoff' dialog.dudi.coa : execcomp: warning in deparse(cmd, width = 500): partial argument match of 'width' to 'width.cutoff' dialog.dudi.dec : execcomp: warning in deparse(cmd, width = 256): partial argument match of 'width' to 'width.cutoff' dialog.dudi.dec : execcomp: warning in deparse(cmd, width = 500): partial argument match of 'width' to 'width.cutoff' dialog.dudi.display : labellicca: warning in s.label(eval(parse(text = paste(dudiname, "$co", sep = ""))), parse(text = tclvalue(xaxvar))[[1]], parse(text = tclvalue(yaxvar))[[1]], clab = 0, cpoi = 2, add.plot = TRUE): partial argument match of 'clab' to 'clabel' dialog.dudi.display : labellicca: warning in s.label(eval(parse(text = paste(dudiname, "$co", sep = ""))), parse(text = tclvalue(xaxvar))[[1]], parse(text = tclvalue(yaxvar))[[1]], clab = 0, cpoi = 2, add.plot = TRUE): partial argument match of 'cpoi' to 'cpoint' dialog.dudi.display : labellscca: warning in s.label(eval(parse(text = paste(dudiname, "$co", sep = ""))), parse(text = tclvalue(xaxvar))[[1]], parse(text = tclvalue(yaxvar))[[1]], clab = 0, cpoi = 2, add.plot = TRUE): partial argument match of 'clab' to 'clabel' dialog.dudi.display : labellscca: warning in s.label(eval(parse(text = paste(dudiname, "$co", sep = ""))), parse(text = tclvalue(xaxvar))[[1]], parse(text = tclvalue(yaxvar))[[1]], clab = 0, cpoi = 2, add.plot = TRUE): partial argument match of 'cpoi' to 'cpoint' dialog.dudi.fca : execcomp: warning in deparse(cmd, width = 256): partial argument match of 'width' to 'width.cutoff' dialog.dudi.fca : execcomp: warning in deparse(cmd, width = 500): partial argument match of 'width' to 'width.cutoff' dialog.dudi.fpca : execcomp: warning in deparse(cmd, width = 256): partial argument match of 'width' to 'width.cutoff' dialog.dudi.fpca : execcomp: warning in deparse(cmd, width = 500): partial argument match of 'width' to 'width.cutoff' dialog.dudi.mix : execcomp: warning in deparse(cmd, width = 256): partial argument match of 'width' to 'width.cutoff' dialog.dudi.mix : execcomp: warning in deparse(cmd, width = 500): partial argument match of 'width' to 'width.cutoff' dialog.dudi.nsc : execcomp: warning in deparse(cmd, width = 256): partial argument match of 'width' to 'width.cutoff' dialog.dudi.nsc : execcomp: warning in deparse(cmd, width = 500): partial argument match of 'width' to 'width.cutoff' dialog.dudi.pca : execcomp: warning in deparse(cmd, width = 256): partial argument match of 'width' to 'width.cutoff' dialog.dudi.pca : execcomp: warning in deparse(cmd, width = 500): partial argument match of 'width' to 'width.cutoff' dialog.dudi.pco : execcomp: warning in deparse(cmd, width = 256): partial argument match of 'width' to 'width.cutoff' dialog.dudi.pco : execcomp: warning in deparse(cmd, width = 500): partial argument match of 'width' to 'width.cutoff' dialog.pcaiv : execcomp: warning in deparse(cmd, width = 256): partial argument match of 'width' to 'width.cutoff' dialog.pcaiv : execcomp: warning in deparse(cmd, width = 500): partial argument match of 'width' to 'width.cutoff' dialog.pcaivortho : execcomp: warning in deparse(cmd, width = 256): partial argument match of 'width' to 'width.cutoff' dialog.pcaivortho : execcomp: warning in deparse(cmd, width = 500): partial argument match of 'width' to 'width.cutoff' dialog.s.arrow : drawgraph: warning in deparse(cmd, width = 500): partial argument match of 'width' to 'width.cutoff' dialog.s.chull : build: warning in eval(parse(text = paste("rep(1, length(levels(", facstr, ")))", sep = "")), env = .GlobalEnv): partial argument match of 'env' to 'envir' dialog.s.chull : drawgraph: warning in deparse(cmd, width = 500): partial argument match of 'width' to 'width.cutoff' dialog.s.class : build: warning in eval(parse(text = paste("rep(1, length(", facstr, "))", sep = "")), env = .GlobalEnv): partial argument match of 'env' to 'envir' dialog.s.class : build: warning in eval(parse(text = paste("rep(1, length(levels(", facstr, ")))", sep = "")), env = .GlobalEnv): partial argument match of 'env' to 'envir' dialog.s.class : drawgraph: warning in deparse(cmd, width = 500): partial argument match of 'width' to 'width.cutoff' dialog.s.corcircle : drawgraph: warning in deparse(cmd, width = 500): partial argument match of 'width' to 'width.cutoff' dialog.s.label : drawgraph: warning in deparse(cmd, width = 500): partial argument match of 'width' to 'width.cutoff' dialog.s.match : drawgraph: warning in deparse(cmd, width = 500): partial argument match of 'width' to 'width.cutoff' dialog.s.value : drawgraph: warning in deparse(cmd, width = 500): partial argument match of 'width' to 'width.cutoff' dialog.within : execcomp: warning in deparse(cmd, width = 256): partial argument match of 'width' to 'width.cutoff' dialog.within : execcomp: warning in deparse(cmd, width = 500): partial argument match of 'width' to 'width.cutoff' explore : outgraph.explore : savefic: warning in png(file = filename, width = width, height = height): partial argument match of 'file' to 'filename' explore : outgraph.explore : savefic: warning in jpeg(file = filename, width = width, height = height): partial argument match of 'file' to 'filename' ordiClust : outgraphOrdiClust : savefic: warning in png(file = filename, width = width, height = height): partial argument match of 'file' to 'filename' ordiClust : outgraphOrdiClust : savefic: warning in jpeg(file = filename, width = width, height = height): partial argument match of 'file' to 'filename' outgraph : savefic: warning in png(file = filename, width = width, height = height): partial argument match of 'file' to 'filename' outgraph : savefic: warning in jpeg(file = filename, width = width, height = height): partial argument match of 'file' to 'filename' * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking examples ... ** running examples for arch 'i386' ... OK ** running examples for arch 'x64' ... OK * checking PDF version of manual ... OK NOTE: There were 2 notes. See 'd:/Rcompile/CRANpkg/local/2.15/ade4TkGUI.Rcheck/00check.log' for details.