* using log directory 'd:/Rcompile/CRANpkg/local/2.15/bcrm.Rcheck' * using R version 2.15.0 (2012-03-30) * using platform: x86_64-pc-mingw32 (64-bit) * using session charset: ISO8859-1 * checking for file 'bcrm/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'bcrm' version '0.3' * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking whether package 'bcrm' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking for portable file names ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * loading checks for arch 'i386' ** checking whether the package can be loaded ... OK ** checking whether the package can be loaded with stated dependencies ... OK ** checking whether the package can be unloaded cleanly ... OK ** checking whether the namespace can be loaded with stated dependencies ... OK ** checking whether the namespace can be unloaded cleanly ... OK * loading checks for arch 'x64' ** checking whether the package can be loaded ... OK ** checking whether the package can be loaded with stated dependencies ... OK ** checking whether the package can be unloaded cleanly ... OK ** checking whether the namespace can be loaded with stated dependencies ... OK ** checking whether the namespace can be unloaded cleanly ... OK * checking for unstated dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... NOTE HTGamma: no visible binding for global variable 'N1' HTGamma: no visible global function definition for 'pow' HTGamma: no visible binding for global variable 'd' HTGamma: no visible binding for global variable 'alpha' HTLogNormal: no visible binding for global variable 'N1' HTLogNormal: no visible global function definition for 'pow' HTLogNormal: no visible binding for global variable 'd' HTLogNormal: no visible binding for global variable 'alpha' HTLogNormal: no visible binding for global variable 'p2' HTUnif: no visible binding for global variable 'N1' HTUnif: no visible global function definition for 'pow' HTUnif: no visible binding for global variable 'd' HTUnif: no visible binding for global variable 'alpha' LogisticGamma: no visible binding for global variable 'N1' LogisticGamma: no visible binding for global variable 'alpha' LogisticGamma: no visible binding for global variable 'd' LogisticLogNormal: no visible binding for global variable 'N1' LogisticLogNormal: no visible binding for global variable 'alpha' LogisticLogNormal: no visible binding for global variable 'd' LogisticLogNormal: no visible binding for global variable 'p2' LogisticUnif: no visible binding for global variable 'N1' LogisticUnif: no visible binding for global variable 'alpha' LogisticUnif: no visible binding for global variable 'd' Posterior.exact: multiple local function definitions for 'int.dose.mean' with different formal arguments Posterior.exact: multiple local function definitions for 'int.dose.sd' with different formal arguments Posterior.exact: multiple local function definitions for 'lik' with different formal arguments Posterior.exact.sim: multiple local function definitions for 'int.dose.mean' with different formal arguments Posterior.exact.sim: multiple local function definitions for 'lik' with different formal arguments PowerGamma: no visible binding for global variable 'N1' PowerGamma: no visible global function definition for 'pow' PowerGamma: no visible binding for global variable 'd' PowerGamma: no visible binding for global variable 'alpha' PowerLogNormal: no visible binding for global variable 'N1' PowerLogNormal: no visible global function definition for 'pow' PowerLogNormal: no visible binding for global variable 'd' PowerLogNormal: no visible binding for global variable 'alpha' PowerLogNormal: no visible binding for global variable 'p2' PowerUnif: no visible binding for global variable 'N1' PowerUnif: no visible global function definition for 'pow' PowerUnif: no visible binding for global variable 'd' PowerUnif: no visible binding for global variable 'alpha' TwoPLogisticLogNormal: no visible binding for global variable 'N1' TwoPLogisticLogNormal: no visible global function definition for 'logit<-' TwoPLogisticLogNormal: no visible binding for global variable 'log.alpha' TwoPLogisticLogNormal: no visible binding for global variable 'd' TwoPLogisticLogNormal: no visible global function definition for 'inverse' TwoPLogisticLogNormal: no visible binding for global variable 'p2' plot.bcrm: no visible binding for global variable 'est' plot.bcrm: no visible binding for global variable 'target.tox' plot.bcrm: no visible binding for global variable 'q2.5' plot.bcrm: no visible binding for global variable 'q97.5' plot.bcrm: no visible binding for global variable 'q50' plot.bcrm: no visible binding for global variable 'q25' plot.bcrm: no visible binding for global variable 'q75' plot.bcrm: no visible binding for global variable 'ndose' plot.bcrm: no visible binding for global variable 'tox.cutpoints' plot.bcrm: no visible binding for global variable 'xmin' plot.bcrm: no visible binding for global variable 'ymin' plot.bcrm: no visible binding for global variable 'xmax' plot.bcrm: no visible binding for global variable 'ymax' plot.bcrm: no visible binding for global variable 'Loss' plot.bcrm: no visible binding for global variable 'Outcome' plot.bcrm.sim: no visible binding for global variable 'patient' plot.bcrm.sim: no visible binding for global variable 'traj' plot.bcrm.sim: no visible binding for global variable 'Statistic' plot.bcrm.sim: no visible binding for global variable '..density..' * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking examples ... ** running examples for arch 'i386' ... OK ** running examples for arch 'x64' ... OK * checking PDF version of manual ... OK NOTE: There was 1 note. See 'd:/Rcompile/CRANpkg/local/2.15/bcrm.Rcheck/00check.log' for details.