* using log directory 'd:/Rcompile/CRANpkg/local/2.15/clim.pact.Rcheck' * using R version 2.15.0 (2012-03-30) * using platform: x86_64-pc-mingw32 (64-bit) * using session charset: ISO8859-1 * checking for file 'clim.pact/DESCRIPTION' ... OK * this is package 'clim.pact' version '2.3-10' * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... NOTE As from R 2.14.0 all packages need a namespace. One will be generated on installation, but it is better to handcraft a NAMESPACE file: R CMD build will produce a suitable starting point. CRAN requires a NAMESPACE file for all submissions. * checking whether package 'clim.pact' can be installed ... OK * checking installed package size ... NOTE installed size is 6.8Mb sub-directories of 1Mb or more: data 6.3Mb * checking package directory ... OK * checking for portable file names ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * loading checks for arch 'i386' ** checking whether the package can be loaded ... OK ** checking whether the package can be loaded with stated dependencies ... OK ** checking whether the package can be unloaded cleanly ... OK * loading checks for arch 'x64' ** checking whether the package can be loaded ... OK ** checking whether the package can be loaded with stated dependencies ... OK ** checking whether the package can be unloaded cleanly ... OK * checking for unstated dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... NOTE DS: no visible binding for global variable 'yy' DSpdf.exp: no visible binding for global variable 'lon.cont' DSpdf.exp: no visible binding for global variable 'lat.cont' DSpdf.exp: no visible binding for global variable 'exp.par' EOF: warning in matrix(c(2, 1), nc = 2): partial argument match of 'nc' to 'ncol' MVR: warning in matrix(c(2, 1), nc = 2): partial argument match of 'nc' to 'ncol' addland: no visible binding for global variable 'lat.cont' avail.locs: warning in read.fwf("data/nordklim_station_catalogue_v1_0.prn", skip = 1, as.is = TRUE, fill = TRUE, width = c(2, 30, 12, 11, 11, 4, 3, 2, 4, 3, 2, 9, rep(6, 23)), col.names = col.names, fileEncoding = "latin1"): partial argument match of 'width' to 'widths' cdfextract: no visible binding for global variable 'itim' combineEOFs: no visible binding for global variable 'eof1' combineFields: no visible binding for global variable 'tim.unit1' combineFields: no visible binding for global variable 'tim.torg1' combineFields: no visible binding for global variable 'ny.1' combineFields: no visible binding for global variable 'nx.1' combineFields: no visible binding for global variable 'ny.2' combineFields: no visible binding for global variable 'nx.2' composite.field: warning in matrix(c(2, 1), nc = 2): partial argument match of 'nc' to 'ncol' composite.field: missing arguments not allowed in calls to 'list' corEOF: warning in matrix(c(2, 1), nc = 2): partial argument match of 'nc' to 'ncol' corField: warning in matrix(c(2, 1), nc = 2): partial argument match of 'nc' to 'ncol' fixField: no visible binding for global variable 'nd' getdnmi: no visible binding for global variable 'dnmi.meta' getdnmi: no visible binding for global variable 'dat' getnacd: warning in read.fwf(paste("data/nacd_v1.", ele.c, sep = ""), width = c(5, 3, 4, rep(5, 12), 3)): partial argument match of 'width' to 'widths' getnacd: no visible binding for global variable 'meta.nacd' getnacd: warning in switch(as.character(meta$quality), ` H` = "Homogenous, rigorously tested & adjusted", H = "Homogenous, rigorously tested & adjusted", ` T` = "Tested, maybe adjusted but not perfectly H.", T = "Tested, maybe adjusted but not perfectly H.", ` N` = "Not tested for inhomogenouity", N = "Not tested for inhomogenouity", ` E` = "Environm. changes prevents clim.change studies", E = "Environm. changes prevents clim.change studies", ` I` = "Inhomogenous series which presently are unadjustable", I = "Inhomogenous series which presently are unadjustable"): partial argument match of 'E' to 'EXPR' getnarp: no visible binding for global variable 'narp.meta' map: warning in matrix(c(2, 1), nc = 2): partial argument match of 'nc' to 'ncol' mapEOF: no visible binding for global variable 'lon' mapEOF: no visible binding for global variable 'lat' mapEOF: no visible binding for global variable 'c.mon' mapField: warning in matrix(c(2, 1), nc = 2): partial argument match of 'nc' to 'ncol' plotCCA: no visible binding for global variable 'r' plotCCA: no visible binding for global variable 'x1' plotCCA: no visible binding for global variable 'main' plotCCA: no visible binding for global variable 'x2' plotCCA: no visible binding for global variable 'u.k' plotCCA: no visible binding for global variable 'i1' plotCCA: no visible binding for global variable 'v.k' plotCCA: no visible binding for global variable 'i2' plotDS: no visible binding for global variable 'id.1' plotDS: no visible binding for global variable 'lon.loc' plotDS: no visible binding for global variable 'lat.loc' plotDS: no visible binding for global variable 'n.fld' plotDS: no visible binding for global variable 'y.srt' plotDS: no visible binding for global variable 'x.srt' plotDS: no visible binding for global variable 'region' plotDS: no visible binding for global variable 'v.name' plotDS: no visible binding for global variable 'month' plotDS: no visible binding for global variable 'fit.r2' plotDS: no visible binding for global variable 'fit.p' plotDS: no visible binding for global variable 'unit' plotDS: no visible binding for global variable 'location' plotDS: no visible binding for global variable 'ex.tag' plotDS: no visible binding for global variable 'pred.name' plotDS: no visible binding for global variable 'pre.gcm' plotDS: no visible binding for global variable 'y.o' plotDS: no visible binding for global variable 'pre.y' plotDS: no visible binding for global variable 'gcm.trnd.p' plotDS: no visible binding for global variable 'rate.ds' plotDS: no visible binding for global variable 'rate.err' plotDS: no visible binding for global variable 'tr.est.p.fit' plotDS: no visible binding for global variable 'step.wise' plotEOF: no visible binding for global variable 'c.mon' plotEOF: no visible binding for global variable 'n.fld' plotEOF: no visible binding for global variable 'size' plotEOF: no visible binding for global variable 'transposed' plotEOF: no visible binding for global variable 'tot.var' plotEOF: no visible binding for global variable 'W' plotEOF: no visible binding for global variable 'dW' plotEOF: no visible binding for global variable 'var.eof' plotEOF: no visible binding for global variable 'PC' plotField: warning in matrix(c(2, 1), nc = 2): partial argument match of 'nc' to 'ncol' plumePlot: no visible binding for global variable 'ds' satelliteOld: warning in matrix(c(2, 1), nc = 2): partial argument match of 'nc' to 'ncol' satelliteOld: no visible binding for global variable 'lat.cont' stationmap: no visible binding for global variable 'nacd.meta' stationmap: no visible binding for global variable 'meta' testfastRegrid: no visible binding for global variable 'DNMI.slp' testfastRegrid: no visible binding for global variable 'oslo.t2m' testfastRegrid: no visible binding for global variable 'DNMI.t2m' * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of 'data' directory ... OK * checking data for non-ASCII characters ... OK * checking data for ASCII and uncompressed saves ... OK * checking examples ... ** running examples for arch 'i386' ... OK ** running examples for arch 'x64' ... OK * checking PDF version of manual ... OK NOTE: There were 3 notes. See 'd:/Rcompile/CRANpkg/local/2.15/clim.pact.Rcheck/00check.log' for details.