* using log directory 'd:/Rcompile/CRANpkg/local/2.15/gstat.Rcheck'
* using R version 2.15.0 (2012-03-30)
* using platform: x86_64-pc-mingw32 (64-bit)
* using session charset: ISO8859-1
* checking for file 'gstat/DESCRIPTION' ... OK
* this is package 'gstat' version '1.0-10'
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking whether package 'gstat' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* loading checks for arch 'i386'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* loading checks for arch 'x64'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking compiled code ... OK
* checking sizes of PDF files under 'inst/doc' ... OK
* checking installed files from 'inst/doc' ... OK
* checking examples ...
** running examples for arch 'i386' ... OK
** running examples for arch 'x64' ... OK
* checking for unstated dependencies in tests ... OK
* checking tests ...
** running tests for arch 'i386' OK
  Running 'blockkr.R'
  Comparing 'blockkr.Rout' to 'blockkr.Rout.save' ...9c9
<     as.Date, as.Date.numeric
---
>     as.Date
  Running 'covtable.R'
  Comparing 'covtable.Rout' to 'covtable.Rout.save' ...9c9
<     as.Date, as.Date.numeric
---
>     as.Date
  Running 'cv.R'
  Comparing 'cv.Rout' to 'cv.Rout.save' ...10c10
<     as.Date, as.Date.numeric
---
>     as.Date
59,61d58
< Warning message:
< In checkNames(value) :
<   attempt to set invalid names: this may lead to problems later on. See ?make.names
76,77c73,74
<  Median :5.767   Median :0.006181   Median :5.787   Median : 0.010332  
<  Mean   :5.893   Mean   :0.006597   Mean   :5.886   Mean   :-0.007156  
---
>  Median :5.767   Median :0.006181   Median :5.787   Median : 0.010331  
>  Mean   :5.893   Mean   :0.006597   Mean   :5.886   Mean   :-0.007157  
81c78
<  Min.   :-5.45653   Min.   :1.000   Min.   :178605   Min.   :329714  
---
>  Min.   :-5.45652   Min.   :1.000   Min.   :178605   Min.   :329714  
87,89d83
< Warning message:
< In checkNames(value) :
<   attempt to set invalid names: this may lead to problems later on. See ?make.names
  Running 'cv3d.R'
  Comparing 'cv3d.Rout' to 'cv3d.Rout.save' ...11c11
<     as.Date, as.Date.numeric
---
>     as.Date
20c20
<  3rd Qu.: 0.1614   3rd Qu.:0.2396   3rd Qu.: 0.5005   3rd Qu.: 0.85076  
---
>  3rd Qu.: 0.1614   3rd Qu.:0.2396   3rd Qu.: 0.5005   3rd Qu.: 0.85075  
23,28c23,28
<  Min.   :-5.1678   Min.   : 1.00   Min.   :0.006784   Min.   :0.003404  
<  1st Qu.:-1.8749   1st Qu.:13.25   1st Qu.:0.239662   1st Qu.:0.246573  
<  Median : 0.2453   Median :25.50   Median :0.486683   Median :0.452500  
<  Mean   : 0.0167   Mean   :25.50   Mean   :0.499664   Mean   :0.496887  
<  3rd Qu.: 2.0201   3rd Qu.:37.75   3rd Qu.:0.747297   3rd Qu.:0.739427  
<  Max.   : 7.3541   Max.   :50.00   Max.   :0.987538   Max.   :0.987169  
---
>  Min.   :-5.16777   Min.   : 1.00   Min.   :0.006784   Min.   :0.003404  
>  1st Qu.:-1.87495   1st Qu.:13.25   1st Qu.:0.239662   1st Qu.:0.246573  
>  Median : 0.24533   Median :25.50   Median :0.486684   Median :0.452500  
>  Mean   : 0.01669   Mean   :25.50   Mean   :0.499664   Mean   :0.496887  
>  3rd Qu.: 2.02008   3rd Qu.:37.75   3rd Qu.:0.747297   3rd Qu.:0.739427  
>  Max.   : 7.35414   Max.   :50.00   Max.   :0.987539   Max.   :0.987169  
  Running 'fit.R'
  Comparing 'fit.Rout' to 'fit.Rout.save' ...9c9
<     as.Date, as.Date.numeric
---
>     as.Date
  Running 'krige0.R'
  Comparing 'krige0.Rout' to 'krige0.Rout.save' ...10c10
<     as.Date, as.Date.numeric
---
>     as.Date
  Running 'line.R'
  Comparing 'line.Rout' to 'line.Rout.save' ...10c10
<     as.Date, as.Date.numeric
---
>     as.Date
34c34
< a 180333 332167    6.1618 0.0080251
---
> a 180333 332167    6.1618 0.008025
72c72
< 1      (0, 0)    6.1618 0.0080251
---
> 1      (0, 0)    6.1618 0.008025
148,149c148,149
< a 180333 332167    6.1618 0.0080251
< b 181000 333000    5.7060 0.0110429
---
> a 180333 332167    6.1618 0.008025
> b 181000 333000    5.7060 0.011043
  Running 'merge.R'
  Comparing 'merge.Rout' to 'merge.Rout.save' ...15c15
<     as.Date, as.Date.numeric
---
>     as.Date
147c147
< 2.10985743e-016            0.5              4 
---
>              0            0.5              4 
208,211c208,211
< row 0:            0.5 6.9388939e-017 
< row 1:            0.5 -9.71445147e-017 
< row 2: -4.16333634e-017            0.5 
< row 3: 2.77555756e-017            0.5 
---
> row 0:            0.5 -9.71445147e-17 
> row 1:            0.5 8.32667268e-17 
> row 2: 1.38777878e-17            0.5 
> row 3: -2.77555756e-17            0.5 
  Running 'na.action.R'
  Comparing 'na.action.Rout' to 'na.action.Rout.save' ...9c9
<     as.Date, as.Date.numeric
---
>     as.Date
  Running 'rings.R'
  Comparing 'rings.Rout' to 'rings.Rout.save' ...9c9
<     as.Date, as.Date.numeric
---
>     as.Date
  Running 'sim.R'
  Comparing 'sim.Rout' to 'sim.Rout.save' ...10c10
<     as.Date, as.Date.numeric
---
>     as.Date
23,25c23,25
< 2 180310 332189 619.6634  802.32709 678.695 774.714 587.487 767.488 672.648
< 3 180205 331707 253.9294    3.85553 421.666 373.561 130.796 150.749 282.151
< 4 178673 330066 844.6284 1226.33655 561.425 337.763 579.610 620.360 791.288
---
> 2 180310 332189 619.6634  802.32715 678.695 774.714 587.487 767.488 672.648
> 3 180205 331707 253.9294    3.85552 421.666 373.561 130.796 150.749 282.151
> 4 178673 330066 844.6284 1226.33667 561.425 337.763 579.610 620.360 791.288
  Running 'unproj.R'
  Comparing 'unproj.Rout' to 'unproj.Rout.save' ...6,7c6,7
< Loaded GDAL runtime: GDAL 1.9.0, released 2011/12/29
< Path to GDAL shared files: d:/temp/RtmpmmhwOc/RLIBS_9607d9d293f/rgdal/gdal
---
> Loaded GDAL runtime: GDAL 1.8.0, released 2011/01/12
> Path to GDAL shared files: /usr/share/gdal/1.8
9c9
< Path to PROJ.4 shared files: d:/temp/RtmpmmhwOc/RLIBS_9607d9d293f/rgdal/proj
---
> Path to PROJ.4 shared files: (autodetected)
21c21
<     as.Date, as.Date.numeric
---
>     as.Date
48,51c48,51
< Spam version 0.29-1 (2012-05-05) is loaded.
< Type 'help( Spam)' or 'demo( spam)' for a short introduction 
< and overview of this package.
< Help for individual functions is also obtained by adding the
---
> Package 'spam' is loaded. Spam version 0.27-0 (2011-08-17).
> Type demo( spam) for some demos, help( Spam) for an overview
> of this package.
> Help for individual functions is optained by adding the
58c58
<     backsolve, forwardsolve
---
>     backsolve, forwardsolve, norm
  Running 'variogram.R'
  Comparing 'variogram.Rout' to 'variogram.Rout.save' ...9c9
<     as.Date, as.Date.numeric
---
>     as.Date
  Running 'vdist.R'
  Comparing 'vdist.Rout' to 'vdist.Rout.save' ...9c9
<     as.Date, as.Date.numeric
---
>     as.Date
29c29
< 1 (180260, 331300)  5.641176 1.100095
---
> 1 (180260, 331300)   5.50671 1.100095
  Running 'windst.R'
  Comparing 'windst.Rout' to 'windst.Rout.save' ...9c9
<     as.Date, as.Date.numeric
---
>     as.Date
24d23
< There were 50 or more warnings (use warnings() to see the first 50)
80,81c79,80
< Loaded GDAL runtime: GDAL 1.9.0, released 2011/12/29
< Path to GDAL shared files: d:/temp/RtmpmmhwOc/RLIBS_9607d9d293f/rgdal/gdal
---
> Loaded GDAL runtime: GDAL 1.8.0, released 2011/01/12
> Path to GDAL shared files: /usr/share/gdal/1.8
83,87c82,83
< Path to PROJ.4 shared files: d:/temp/RtmpmmhwOc/RLIBS_9607d9d293f/rgdal/proj
< Checking rgeos availability: FALSE
<  	Note: when rgeos is not available, polygon geometry 	computations in maptools depend on gpclib,
<  	which has a restricted licence. It is disabled by default;
<  	to enable gpclib, type gpclibPermit()
---
> Path to PROJ.4 shared files: (autodetected)
> Checking rgeos availability: TRUE
89,99d84
< Warning messages:
< 1: In STF(sp, time) : STF(): setting timeIsInterval to default value TRUE
< 
< 2: In STF(grd, tgrd) : STF(): setting timeIsInterval to default value TRUE
< 
< 3: In STF(sp, time) : STF(): setting timeIsInterval to default value TRUE
< 
< 4: In STF(grd, tgrd) : STF(): setting timeIsInterval to default value TRUE
< 
< 5: In STF(sp, time) : STF(): setting timeIsInterval to default value TRUE
< 
** running tests for arch 'x64' OK
  Running 'blockkr.R'
  Comparing 'blockkr.Rout' to 'blockkr.Rout.save' ...9c9
<     as.Date, as.Date.numeric
---
>     as.Date
  Running 'covtable.R'
  Comparing 'covtable.Rout' to 'covtable.Rout.save' ...9c9
<     as.Date, as.Date.numeric
---
>     as.Date
  Running 'cv.R'
  Comparing 'cv.Rout' to 'cv.Rout.save' ...10c10
<     as.Date, as.Date.numeric
---
>     as.Date
59,61d58
< Warning message:
< In checkNames(value) :
<   attempt to set invalid names: this may lead to problems later on. See ?make.names
76,77c73,74
<  Median :5.767   Median :0.006181   Median :5.787   Median : 0.010332  
<  Mean   :5.893   Mean   :0.006597   Mean   :5.886   Mean   :-0.007156  
---
>  Median :5.767   Median :0.006181   Median :5.787   Median : 0.010331  
>  Mean   :5.893   Mean   :0.006597   Mean   :5.886   Mean   :-0.007157  
81c78
<  Min.   :-5.45653   Min.   :1.000   Min.   :178605   Min.   :329714  
---
>  Min.   :-5.45652   Min.   :1.000   Min.   :178605   Min.   :329714  
87,89d83
< Warning message:
< In checkNames(value) :
<   attempt to set invalid names: this may lead to problems later on. See ?make.names
  Running 'cv3d.R'
  Comparing 'cv3d.Rout' to 'cv3d.Rout.save' ...11c11
<     as.Date, as.Date.numeric
---
>     as.Date
20c20
<  3rd Qu.: 0.1614   3rd Qu.:0.2396   3rd Qu.: 0.5005   3rd Qu.: 0.85076  
---
>  3rd Qu.: 0.1614   3rd Qu.:0.2396   3rd Qu.: 0.5005   3rd Qu.: 0.85075  
23,28c23,28
<  Min.   :-5.1678   Min.   : 1.00   Min.   :0.006784   Min.   :0.003404  
<  1st Qu.:-1.8749   1st Qu.:13.25   1st Qu.:0.239662   1st Qu.:0.246573  
<  Median : 0.2453   Median :25.50   Median :0.486683   Median :0.452500  
<  Mean   : 0.0167   Mean   :25.50   Mean   :0.499664   Mean   :0.496887  
<  3rd Qu.: 2.0201   3rd Qu.:37.75   3rd Qu.:0.747297   3rd Qu.:0.739427  
<  Max.   : 7.3541   Max.   :50.00   Max.   :0.987538   Max.   :0.987169  
---
>  Min.   :-5.16777   Min.   : 1.00   Min.   :0.006784   Min.   :0.003404  
>  1st Qu.:-1.87495   1st Qu.:13.25   1st Qu.:0.239662   1st Qu.:0.246573  
>  Median : 0.24533   Median :25.50   Median :0.486684   Median :0.452500  
>  Mean   : 0.01669   Mean   :25.50   Mean   :0.499664   Mean   :0.496887  
>  3rd Qu.: 2.02008   3rd Qu.:37.75   3rd Qu.:0.747297   3rd Qu.:0.739427  
>  Max.   : 7.35414   Max.   :50.00   Max.   :0.987539   Max.   :0.987169  
  Running 'fit.R'
  Comparing 'fit.Rout' to 'fit.Rout.save' ...9c9
<     as.Date, as.Date.numeric
---
>     as.Date
  Running 'krige0.R'
  Comparing 'krige0.Rout' to 'krige0.Rout.save' ...10c10
<     as.Date, as.Date.numeric
---
>     as.Date
  Running 'line.R'
  Comparing 'line.Rout' to 'line.Rout.save' ...10c10
<     as.Date, as.Date.numeric
---
>     as.Date
  Running 'merge.R'
  Comparing 'merge.Rout' to 'merge.Rout.save' ...15c15
<     as.Date, as.Date.numeric
---
>     as.Date
208,211c208,211
< row 0:            0.5 -9.71445147e-017 
< row 1:            0.5 8.32667268e-017 
< row 2: 1.38777878e-017            0.5 
< row 3: -2.77555756e-017            0.5 
---
> row 0:            0.5 -9.71445147e-17 
> row 1:            0.5 8.32667268e-17 
> row 2: 1.38777878e-17            0.5 
> row 3: -2.77555756e-17            0.5 
  Running 'na.action.R'
  Comparing 'na.action.Rout' to 'na.action.Rout.save' ...9c9
<     as.Date, as.Date.numeric
---
>     as.Date
  Running 'rings.R'
  Comparing 'rings.Rout' to 'rings.Rout.save' ...9c9
<     as.Date, as.Date.numeric
---
>     as.Date
  Running 'sim.R'
  Comparing 'sim.Rout' to 'sim.Rout.save' ...10c10
<     as.Date, as.Date.numeric
---
>     as.Date
  Running 'unproj.R'
  Comparing 'unproj.Rout' to 'unproj.Rout.save' ...6,7c6,7
< Loaded GDAL runtime: GDAL 1.9.0, released 2011/12/29
< Path to GDAL shared files: d:/temp/RtmpmmhwOc/RLIBS_9607d9d293f/rgdal/gdal
---
> Loaded GDAL runtime: GDAL 1.8.0, released 2011/01/12
> Path to GDAL shared files: /usr/share/gdal/1.8
9c9
< Path to PROJ.4 shared files: d:/temp/RtmpmmhwOc/RLIBS_9607d9d293f/rgdal/proj
---
> Path to PROJ.4 shared files: (autodetected)
21c21
<     as.Date, as.Date.numeric
---
>     as.Date
48,51c48,51
< Spam version 0.29-1 (2012-05-05) is loaded.
< Type 'help( Spam)' or 'demo( spam)' for a short introduction 
< and overview of this package.
< Help for individual functions is also obtained by adding the
---
> Package 'spam' is loaded. Spam version 0.27-0 (2011-08-17).
> Type demo( spam) for some demos, help( Spam) for an overview
> of this package.
> Help for individual functions is optained by adding the
58c58
<     backsolve, forwardsolve
---
>     backsolve, forwardsolve, norm
  Running 'variogram.R'
  Comparing 'variogram.Rout' to 'variogram.Rout.save' ...9c9
<     as.Date, as.Date.numeric
---
>     as.Date
  Running 'vdist.R'
  Comparing 'vdist.Rout' to 'vdist.Rout.save' ...9c9
<     as.Date, as.Date.numeric
---
>     as.Date
29c29
< 1 (180260, 331300)  5.641176 1.100095
---
> 1 (180260, 331300)   5.50671 1.100095
  Running 'windst.R'
  Comparing 'windst.Rout' to 'windst.Rout.save' ...9c9
<     as.Date, as.Date.numeric
---
>     as.Date
24d23
< There were 50 or more warnings (use warnings() to see the first 50)
80,81c79,80
< Loaded GDAL runtime: GDAL 1.9.0, released 2011/12/29
< Path to GDAL shared files: d:/temp/RtmpmmhwOc/RLIBS_9607d9d293f/rgdal/gdal
---
> Loaded GDAL runtime: GDAL 1.8.0, released 2011/01/12
> Path to GDAL shared files: /usr/share/gdal/1.8
83,87c82,83
< Path to PROJ.4 shared files: d:/temp/RtmpmmhwOc/RLIBS_9607d9d293f/rgdal/proj
< Checking rgeos availability: FALSE
<  	Note: when rgeos is not available, polygon geometry 	computations in maptools depend on gpclib,
<  	which has a restricted licence. It is disabled by default;
<  	to enable gpclib, type gpclibPermit()
---
> Path to PROJ.4 shared files: (autodetected)
> Checking rgeos availability: TRUE
89,99d84
< Warning messages:
< 1: In STF(sp, time) : STF(): setting timeIsInterval to default value TRUE
< 
< 2: In STF(grd, tgrd) : STF(): setting timeIsInterval to default value TRUE
< 
< 3: In STF(sp, time) : STF(): setting timeIsInterval to default value TRUE
< 
< 4: In STF(grd, tgrd) : STF(): setting timeIsInterval to default value TRUE
< 
< 5: In STF(sp, time) : STF(): setting timeIsInterval to default value TRUE
< 
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in 'inst/doc' ... OK
* checking running R code from vignettes ... OK
* checking re-building of vignette PDFs ... OK
* checking PDF version of manual ... OK