* using log directory 'd:/Rcompile/CRANpkg/local/2.15/intamap.Rcheck' * using R version 2.15.0 (2012-03-30) * using platform: x86_64-pc-mingw32 (64-bit) * using session charset: ISO8859-1 * checking for file 'intamap/DESCRIPTION' ... OK * this is package 'intamap' version '1.3-11' * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking whether package 'intamap' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking for portable file names ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * loading checks for arch 'i386' ** checking whether the package can be loaded ... OK ** checking whether the package can be loaded with stated dependencies ... OK ** checking whether the package can be unloaded cleanly ... OK ** checking whether the namespace can be loaded with stated dependencies ... OK ** checking whether the namespace can be unloaded cleanly ... OK * loading checks for arch 'x64' ** checking whether the package can be loaded ... OK ** checking whether the package can be loaded with stated dependencies ... OK ** checking whether the package can be unloaded cleanly ... OK ** checking whether the namespace can be loaded with stated dependencies ... OK ** checking whether the namespace can be unloaded cleanly ... OK * checking for unstated dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... NOTE jpdf_old : erfc: warning in pnorm(x * sqrt(2), lower = FALSE): partial argument match of 'lower' to 'lower.tail' predictTime: no visible binding for global variable 'timeModels' timeSampling: warning in generateRandomObject(obsInterv[i], predInterv[1], FUN = FUN, formulaS = formulaString, class = class, ...): partial argument match of 'formulaS' to 'formulaString' * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of 'data' directory ... OK * checking data for non-ASCII characters ... OK * checking data for ASCII and uncompressed saves ... OK * checking examples ... ** running examples for arch 'i386' ... OK ** running examples for arch 'x64' ... OK * checking for unstated dependencies in tests ... OK * checking tests ... ** running tests for arch 'i386' OK Running 'anisotropyTest.R' Comparing 'anisotropyTest.Rout' to 'anisotropyTest.Rout.save' ...4,10d3 < < Attaching package: 'zoo' < < The following object(s) are masked from 'package:base': < < as.Date, as.Date.numeric < 12,15c5,8 < Loaded GDAL runtime: GDAL 1.9.0, released 2011/12/29 < Path to GDAL shared files: d:/temp/Rtmpa0vxd6/RLIBS_17647a6b35f1/rgdal/gdal < Loaded PROJ.4 runtime: Rel. 4.7.1, 23 September 2009, [PJ_VERSION: 470] < Path to PROJ.4 shared files: d:/temp/Rtmpa0vxd6/RLIBS_17647a6b35f1/rgdal/proj --- > Loaded GDAL runtime: GDAL 1.6.1, released 2009/05/11 > Path to GDAL shared files: c:/R/R-29~1.1/library/rgdal/gdal > Loaded PROJ.4 runtime: Rel. 4.6.1, 21 August 2008 > Path to PROJ.4 shared files: c:/R/R-29~1.1/library/rgdal/proj 19c12,13 < The following object(s) are masked from 'package:evd': --- > > The following object(s) are masked from package:evd : 106,107c100,101 < 1 Nug 0.0148462 0.000000 < 2 Sph 0.6299043 0.634356 --- > 1 Nug 0.01484620 0.000000 > 2 Sph 0.62990427 0.634356 187c181 < [1,] 103.368 161.6921 1.593826 --- > [1,] 103.3680 161.6921 1.593826 Running 'block.R' Comparing 'block.Rout' to 'block.Rout.save' ...4,10d3 < < Attaching package: 'zoo' < < The following object(s) are masked from 'package:base': < < as.Date, as.Date.numeric < 12,15c5,8 < Loaded GDAL runtime: GDAL 1.9.0, released 2011/12/29 < Path to GDAL shared files: d:/temp/Rtmpa0vxd6/RLIBS_17647a6b35f1/rgdal/gdal < Loaded PROJ.4 runtime: Rel. 4.7.1, 23 September 2009, [PJ_VERSION: 470] < Path to PROJ.4 shared files: d:/temp/Rtmpa0vxd6/RLIBS_17647a6b35f1/rgdal/proj --- > Loaded GDAL runtime: GDAL 1.6.1, released 2009/05/11 > Path to GDAL shared files: c:/R/R-29~1.1/library/rgdal/gdal > Loaded PROJ.4 runtime: Rel. 4.6.1, 21 August 2008 > Path to PROJ.4 shared files: c:/R/R-29~1.1/library/rgdal/proj 19c12,13 < The following object(s) are masked from 'package:evd': --- > > The following object(s) are masked from package:evd : 86c80 < 1st Qu.:179485 1st Qu.:330829 1st Qu.:5.481 1st Qu.:0.020855 --- > 1st Qu.:179485 1st Qu.:330829 1st Qu.:5.481 1st Qu.:0.020854 92,97c86,91 < Min. :0.00000 Min. :0.0000 Min. :4.577 Min. :0.0000 < 1st Qu.:0.04287 1st Qu.:0.1562 1st Qu.:5.016 1st Qu.:0.0117 < Median :0.38354 Median :0.6165 Median :5.419 Median :0.1067 < Mean :0.48239 Mean :0.5176 Mean :5.468 Mean :0.1486 < 3rd Qu.:0.84382 3rd Qu.:0.9571 3rd Qu.:5.854 3rd Qu.:0.2098 < Max. :1.00000 Max. :1.0000 Max. :6.907 Max. :0.6902 --- > Min. :5.546e-11 Min. :2.280e-09 Min. :4.577 Min. :0.0000 > 1st Qu.:4.287e-02 1st Qu.:1.562e-01 1st Qu.:5.016 1st Qu.:0.0117 > Median :3.835e-01 Median :6.165e-01 Median :5.419 Median :0.1067 > Mean :4.824e-01 Mean :5.176e-01 Mean :5.468 Mean :0.1486 > 3rd Qu.:8.438e-01 3rd Qu.:9.571e-01 3rd Qu.:5.854 3rd Qu.:0.2098 > Max. :1.000e+00 Max. :1.000e+00 Max. :6.907 Max. :0.6902 Running 'idw.R' Comparing 'idw.Rout' to 'idw.Rout.save' ...4,10d3 < < Attaching package: 'zoo' < < The following object(s) are masked from 'package:base': < < as.Date, as.Date.numeric < 12,15c5,8 < Loaded GDAL runtime: GDAL 1.9.0, released 2011/12/29 < Path to GDAL shared files: d:/temp/Rtmpa0vxd6/RLIBS_17647a6b35f1/rgdal/gdal < Loaded PROJ.4 runtime: Rel. 4.7.1, 23 September 2009, [PJ_VERSION: 470] < Path to PROJ.4 shared files: d:/temp/Rtmpa0vxd6/RLIBS_17647a6b35f1/rgdal/proj --- > Loaded GDAL runtime: GDAL 1.7.2, released 2010/04/23 > Path to GDAL shared files: E:\skojejo\Documents/R/win-library/2.12/rgdal/gdal > Loaded PROJ.4 runtime: Rel. 4.7.1, 23 September 2009 > Path to PROJ.4 shared files: E:\skojejo\Documents/R/win-library/2.12/rgdal/proj Running 'interpolate.R' Comparing 'interpolate.Rout' to 'interpolate.Rout.save' ...5,11d4 < < Attaching package: 'zoo' < < The following object(s) are masked from 'package:base': < < as.Date, as.Date.numeric < 13,16c6,9 < Loaded GDAL runtime: GDAL 1.9.0, released 2011/12/29 < Path to GDAL shared files: d:/temp/Rtmpa0vxd6/RLIBS_17647a6b35f1/rgdal/gdal < Loaded PROJ.4 runtime: Rel. 4.7.1, 23 September 2009, [PJ_VERSION: 470] < Path to PROJ.4 shared files: d:/temp/Rtmpa0vxd6/RLIBS_17647a6b35f1/rgdal/proj --- > Loaded GDAL runtime: GDAL 1.7.2, released 2010/04/23 > Path to GDAL shared files: E:\skojejo\Documents/R/win-library/2.12/rgdal/gdal > Loaded PROJ.4 runtime: Rel. 4.7.1, 23 September 2009 > Path to PROJ.4 shared files: E:\skojejo\Documents/R/win-library/2.12/rgdal/proj 30c23 < R 2012-05-25 17:55:21 interpolating 155 observations, 3103 prediction locations --- > R 2011-02-28 17:27:00 interpolating 155 observations, 3103 prediction locations 39,41c32 < 2: In readLines(file(fn, "r")) : < incomplete final line found on 'd:\temp\RtmpKuteQo\filefc82c9f21cb' < 3: closing unused connection 3 (d:\temp\RtmpKuteQo\filefc82c9f21cb) --- > 2: closing unused connection 3 (C:\Users\skoiejo\AppData\Local\Temp\RtmphOg4zb\file2714278f) 73c64 < R 2012-05-25 17:55:35 interpolating 155 observations, 3103 prediction locations --- > R 2011-02-28 17:27:16 interpolating 155 observations, 3103 prediction locations 413c404 < R 2012-05-25 17:55:39 interpolating 155 observations, 3103 prediction locations --- > R 2011-02-28 17:27:19 interpolating 155 observations, 3103 prediction locations 416,419d406 < Warning messages: < 1: In readLines(file(fn, "r")) : < incomplete final line found on 'd:\temp\RtmpKuteQo\filefc85aa0164c' < 2: closing unused connection 3 (d:\temp\RtmpKuteQo\filefc85aa0164c) 427a415,416 > Warning message: > closing unused connection 3 (C:\Users\skoiejo\AppData\Local\Temp\RtmphOg4zb\file3dce117c) 440c429 < R 2012-05-25 17:55:42 interpolating 30 observations, 24 prediction locations --- > R 2011-02-28 17:27:21 interpolating 30 observations, 24 prediction locations 447c436 < R 2012-05-25 17:55:45 interpolating 30 observations, 24 prediction locations --- > R 2011-02-28 17:27:23 interpolating 30 observations, 24 prediction locations 466,471c455,460 < Min. :179283 Min. :330139 Min. : 141 Min. : 0 < 1st Qu.:179753 1st Qu.:330765 1st Qu.: 231 1st Qu.: 6007 < Median :180222 Median :331704 Median : 528 Median : 655114 < Mean :180222 Mean :331704 Mean : 16670219 Mean : 39155822 < 3rd Qu.:180691 3rd Qu.:332642 3rd Qu.: 4838 3rd Qu.:100000000 < Max. :181161 Max. :333268 Max. :100000000 Max. :100000000 --- > Min. :179283 Min. :330139 Min. :1.409e+02 Min. : 0 > 1st Qu.:179753 1st Qu.:330765 1st Qu.:2.314e+02 1st Qu.: 6007 > Median :180222 Median :331704 Median :5.278e+02 Median : 655114 > Mean :180222 Mean :331704 Mean :1.667e+07 Mean : 39155822 > 3rd Qu.:180691 3rd Qu.:332642 3rd Qu.:4.838e+03 3rd Qu.:100000000 > Max. :181161 Max. :333268 Max. :1.000e+08 Max. :100000000 473,478c462,467 < Min. :0.0000402 Min. : 131.0 < 1st Qu.:0.0056347 1st Qu.: 167.9 < Median :0.0829580 Median : 253.7 < Mean :0.1653267 Mean : 439.5 < 3rd Qu.:0.2797628 3rd Qu.: 572.1 < Max. :0.6133520 Max. :1427.6 --- > Min. :4.021e-05 Min. : 131.0 > 1st Qu.:5.635e-03 1st Qu.: 167.9 > Median :8.296e-02 Median : 253.7 > Mean :1.653e-01 Mean : 439.5 > 3rd Qu.:2.798e-01 3rd Qu.: 572.1 > Max. :6.134e-01 Max. :1427.6 Running 'interpolateBlock.R' Comparing 'interpolateBlock.Rout' to 'interpolateBlock.Rout.save' ...4,10d3 < < Attaching package: 'zoo' < < The following object(s) are masked from 'package:base': < < as.Date, as.Date.numeric < 12,15c5,8 < Loaded GDAL runtime: GDAL 1.9.0, released 2011/12/29 < Path to GDAL shared files: d:/temp/Rtmpa0vxd6/RLIBS_17647a6b35f1/rgdal/gdal < Loaded PROJ.4 runtime: Rel. 4.7.1, 23 September 2009, [PJ_VERSION: 470] < Path to PROJ.4 shared files: d:/temp/Rtmpa0vxd6/RLIBS_17647a6b35f1/rgdal/proj --- > Loaded GDAL runtime: GDAL 1.7.2, released 2010/04/23 > Path to GDAL shared files: E:\skojejo\Documents/R/win-library/2.12/rgdal/gdal > Loaded PROJ.4 runtime: Rel. 4.7.1, 23 September 2009 > Path to PROJ.4 shared files: E:\skojejo\Documents/R/win-library/2.12/rgdal/proj 36c29 < R 2012-05-25 17:55:48 interpolating 155 observations, 48 prediction locations --- > R 2011-02-28 17:22:30 interpolating 155 observations, 48 prediction locations 79c72 < R 2012-05-25 17:55:49 interpolating 155 observations, 48 prediction locations --- > R 2011-02-28 17:22:30 interpolating 155 observations, 48 prediction locations 87c80 < 1st Qu.:179485 1st Qu.:330829 1st Qu.:5.481 1st Qu.:0.020855 --- > 1st Qu.:179485 1st Qu.:330829 1st Qu.:5.481 1st Qu.:0.020854 101c94 < [1] 0.0162806 --- > [1] 0.01628060 Running 'javaR.R' Comparing 'javaR.Rout' to 'javaR.Rout.save' ...4,10d3 < < Attaching package: 'zoo' < < The following object(s) are masked from 'package:base': < < as.Date, as.Date.numeric < 12,15c5,8 < Loaded GDAL runtime: GDAL 1.9.0, released 2011/12/29 < Path to GDAL shared files: d:/temp/Rtmpa0vxd6/RLIBS_17647a6b35f1/rgdal/gdal < Loaded PROJ.4 runtime: Rel. 4.7.1, 23 September 2009, [PJ_VERSION: 470] < Path to PROJ.4 shared files: d:/temp/Rtmpa0vxd6/RLIBS_17647a6b35f1/rgdal/proj --- > Loaded GDAL runtime: GDAL 1.7.2, released 2010/04/23 > Path to GDAL shared files: E:\skojejo\Documents/R/win-library/2.12/rgdal/gdal > Loaded PROJ.4 runtime: Rel. 4.7.1, 23 September 2009 > Path to PROJ.4 shared files: E:\skojejo\Documents/R/win-library/2.12/rgdal/proj 63,68c56,61 < Min. :4021158 Min. :3102915 Min. :4.805 Min. :0.09789 < 1st Qu.:4021733 1st Qu.:3103766 1st Qu.:5.485 1st Qu.:0.14345 < Median :4022423 Median :3104617 Median :5.675 Median :0.33215 < Mean :4022423 Mean :3104617 Mean :5.965 Mean :0.39523 < 3rd Qu.:4023113 3rd Qu.:3105468 3rd Qu.:6.456 3rd Qu.:0.64199 < Max. :4023688 Max. :3106318 Max. :7.497 Max. :0.78320 --- > Min. :4021158 Min. :3102915 Min. :4.805 Min. :0.0979 > 1st Qu.:4021733 1st Qu.:3103766 1st Qu.:5.485 1st Qu.:0.1435 > Median :4022423 Median :3104617 Median :5.675 Median :0.3322 > Mean :4022423 Mean :3104617 Mean :5.965 Mean :0.3952 > 3rd Qu.:4023113 3rd Qu.:3105468 3rd Qu.:6.456 3rd Qu.:0.6420 > Max. :4023688 Max. :3106318 Max. :7.497 Max. :0.7832 71c64 < 1st Qu.:0.136987 1st Qu.:0.2135848 1st Qu.:4.641 --- > 1st Qu.:0.136987 1st Qu.:0.2135847 1st Qu.:4.641 Running 'linearVariogram.R' Comparing 'linearVariogram.Rout' to 'linearVariogram.Rout.save' ...4,10d3 < < Attaching package: 'zoo' < < The following object(s) are masked from 'package:base': < < as.Date, as.Date.numeric < 12,15c5,8 < Loaded GDAL runtime: GDAL 1.9.0, released 2011/12/29 < Path to GDAL shared files: d:/temp/Rtmpa0vxd6/RLIBS_17647a6b35f1/rgdal/gdal < Loaded PROJ.4 runtime: Rel. 4.7.1, 23 September 2009, [PJ_VERSION: 470] < Path to PROJ.4 shared files: d:/temp/Rtmpa0vxd6/RLIBS_17647a6b35f1/rgdal/proj --- > Loaded GDAL runtime: GDAL 1.7.2, released 2010/04/23 > Path to GDAL shared files: E:\skojejo\Documents/R/win-library/2.12/rgdal/gdal > Loaded PROJ.4 runtime: Rel. 4.7.1, 23 September 2009 > Path to PROJ.4 shared files: E:\skojejo\Documents/R/win-library/2.12/rgdal/proj Running 'minimal.R' Comparing 'minimal.Rout' to 'minimal.Rout.save' ...4,10d3 < < Attaching package: 'zoo' < < The following object(s) are masked from 'package:base': < < as.Date, as.Date.numeric < 12,15c5,8 < Loaded GDAL runtime: GDAL 1.9.0, released 2011/12/29 < Path to GDAL shared files: d:/temp/Rtmpa0vxd6/RLIBS_17647a6b35f1/rgdal/gdal < Loaded PROJ.4 runtime: Rel. 4.7.1, 23 September 2009, [PJ_VERSION: 470] < Path to PROJ.4 shared files: d:/temp/Rtmpa0vxd6/RLIBS_17647a6b35f1/rgdal/proj --- > Loaded GDAL runtime: GDAL 1.7.2, released 2010/04/23 > Path to GDAL shared files: E:\skojejo\Documents/R/win-library/2.12/rgdal/gdal > Loaded PROJ.4 runtime: Rel. 4.7.1, 23 September 2009 > Path to PROJ.4 shared files: E:\skojejo\Documents/R/win-library/2.12/rgdal/proj 64,65c57,58 < x 178460 181540 < y 329620 333740 --- > x 178440 181560 > y 329600 333760 Running 'transGaussian.R' Comparing 'transGaussian.Rout' to 'transGaussian.Rout.save' ...5,11d4 < < Attaching package: 'zoo' < < The following object(s) are masked from 'package:base': < < as.Date, as.Date.numeric < 13,16c6,9 < Loaded GDAL runtime: GDAL 1.9.0, released 2011/12/29 < Path to GDAL shared files: d:/temp/Rtmpa0vxd6/RLIBS_17647a6b35f1/rgdal/gdal < Loaded PROJ.4 runtime: Rel. 4.7.1, 23 September 2009, [PJ_VERSION: 470] < Path to PROJ.4 shared files: d:/temp/Rtmpa0vxd6/RLIBS_17647a6b35f1/rgdal/proj --- > Loaded GDAL runtime: GDAL 1.7.2, released 2010/04/23 > Path to GDAL shared files: E:\skojejo\Documents/R/win-library/2.12/rgdal/gdal > Loaded PROJ.4 runtime: Rel. 4.7.1, 23 September 2009 > Path to PROJ.4 shared files: E:\skojejo\Documents/R/win-library/2.12/rgdal/proj 31c24 < R 2012-05-25 17:56:00 interpolating 155 observations, 3103 prediction locations --- > R 2011-02-28 17:22:38 interpolating 155 observations, 3103 prediction locations 33,34c26,27 < Warning messages: < 1: In predictTime(nObs = dim(observations)[1], nPred = dim(coordinates(predictionLocations))[1], : --- > Warning message: > In predictTime(nObs = dim(observations)[1], nPred = dim(coordinates(predictionLocations))[1], : 40,41d32 < 2: In readLines(file(fn, "r")) : < incomplete final line found on 'd:\temp\RtmpEr9ir3\filef60385f251e' 51c42 < closing unused connection 3 (d:\temp\RtmpEr9ir3\filef60385f251e) --- > closing unused connection 3 (C:\Users\skoiejo\AppData\Local\Temp\Rtmph7f4zb\file1f9c1f20) Running 'unbiased.R' Comparing 'unbiased.Rout' to 'unbiased.Rout.save' ...5,11d4 < < Attaching package: 'zoo' < < The following object(s) are masked from 'package:base': < < as.Date, as.Date.numeric < 13,16c6,9 < Loaded GDAL runtime: GDAL 1.9.0, released 2011/12/29 < Path to GDAL shared files: d:/temp/Rtmpa0vxd6/RLIBS_17647a6b35f1/rgdal/gdal < Loaded PROJ.4 runtime: Rel. 4.7.1, 23 September 2009, [PJ_VERSION: 470] < Path to PROJ.4 shared files: d:/temp/Rtmpa0vxd6/RLIBS_17647a6b35f1/rgdal/proj --- > Loaded GDAL runtime: GDAL 1.7.2, released 2010/04/23 > Path to GDAL shared files: E:\skojejo\Documents/R/win-library/2.12/rgdal/gdal > Loaded PROJ.4 runtime: Rel. 4.7.1, 23 September 2009 > Path to PROJ.4 shared files: E:\skojejo\Documents/R/win-library/2.12/rgdal/proj 65,70c58,63 < Min. :5.050 Min. :5.207 Min. :0.000000 < 1st Qu.:5.771 1st Qu.:6.101 1st Qu.:0.002605 < Median :6.074 Median :6.665 Median :0.054342 < Mean :6.229 Mean :6.483 Mean :0.143007 < 3rd Qu.:6.637 3rd Qu.:6.871 3rd Qu.:0.234089 < Max. :7.759 Max. :7.604 Max. :0.843378 --- > Min. :5.050 Min. :5.207 Min. :9.661e-10 > 1st Qu.:5.771 1st Qu.:6.101 1st Qu.:2.605e-03 > Median :6.074 Median :6.665 Median :5.434e-02 > Mean :6.229 Mean :6.483 Mean :1.430e-01 > 3rd Qu.:6.637 3rd Qu.:6.871 3rd Qu.:2.341e-01 > Max. :7.759 Max. :7.604 Max. :8.434e-01 ** running tests for arch 'x64' OK Running 'anisotropyTest.R' Comparing 'anisotropyTest.Rout' to 'anisotropyTest.Rout.save' ...4,10d3 < < Attaching package: 'zoo' < < The following object(s) are masked from 'package:base': < < as.Date, as.Date.numeric < 12,15c5,8 < Loaded GDAL runtime: GDAL 1.9.0, released 2011/12/29 < Path to GDAL shared files: d:/temp/Rtmpa0vxd6/RLIBS_17647a6b35f1/rgdal/gdal < Loaded PROJ.4 runtime: Rel. 4.7.1, 23 September 2009, [PJ_VERSION: 470] < Path to PROJ.4 shared files: d:/temp/Rtmpa0vxd6/RLIBS_17647a6b35f1/rgdal/proj --- > Loaded GDAL runtime: GDAL 1.6.1, released 2009/05/11 > Path to GDAL shared files: c:/R/R-29~1.1/library/rgdal/gdal > Loaded PROJ.4 runtime: Rel. 4.6.1, 21 August 2008 > Path to PROJ.4 shared files: c:/R/R-29~1.1/library/rgdal/proj 19c12,13 < The following object(s) are masked from 'package:evd': --- > > The following object(s) are masked from package:evd : 106,107c100,101 < 1 Nug 0.0148462 0.000000 < 2 Sph 0.6299043 0.634356 --- > 1 Nug 0.01484620 0.000000 > 2 Sph 0.62990427 0.634356 187c181 < [1,] 103.368 161.6921 1.593826 --- > [1,] 103.3680 161.6921 1.593826 Running 'block.R' Comparing 'block.Rout' to 'block.Rout.save' ...4,10d3 < < Attaching package: 'zoo' < < The following object(s) are masked from 'package:base': < < as.Date, as.Date.numeric < 12,15c5,8 < Loaded GDAL runtime: GDAL 1.9.0, released 2011/12/29 < Path to GDAL shared files: d:/temp/Rtmpa0vxd6/RLIBS_17647a6b35f1/rgdal/gdal < Loaded PROJ.4 runtime: Rel. 4.7.1, 23 September 2009, [PJ_VERSION: 470] < Path to PROJ.4 shared files: d:/temp/Rtmpa0vxd6/RLIBS_17647a6b35f1/rgdal/proj --- > Loaded GDAL runtime: GDAL 1.6.1, released 2009/05/11 > Path to GDAL shared files: c:/R/R-29~1.1/library/rgdal/gdal > Loaded PROJ.4 runtime: Rel. 4.6.1, 21 August 2008 > Path to PROJ.4 shared files: c:/R/R-29~1.1/library/rgdal/proj 19c12,13 < The following object(s) are masked from 'package:evd': --- > > The following object(s) are masked from package:evd : 86c80 < 1st Qu.:179485 1st Qu.:330829 1st Qu.:5.481 1st Qu.:0.020855 --- > 1st Qu.:179485 1st Qu.:330829 1st Qu.:5.481 1st Qu.:0.020854 92,97c86,91 < Min. :0.00000 Min. :0.0000 Min. :4.577 Min. :0.0000 < 1st Qu.:0.04287 1st Qu.:0.1562 1st Qu.:5.016 1st Qu.:0.0117 < Median :0.38354 Median :0.6165 Median :5.419 Median :0.1067 < Mean :0.48239 Mean :0.5176 Mean :5.468 Mean :0.1486 < 3rd Qu.:0.84382 3rd Qu.:0.9571 3rd Qu.:5.854 3rd Qu.:0.2098 < Max. :1.00000 Max. :1.0000 Max. :6.907 Max. :0.6902 --- > Min. :5.546e-11 Min. :2.280e-09 Min. :4.577 Min. :0.0000 > 1st Qu.:4.287e-02 1st Qu.:1.562e-01 1st Qu.:5.016 1st Qu.:0.0117 > Median :3.835e-01 Median :6.165e-01 Median :5.419 Median :0.1067 > Mean :4.824e-01 Mean :5.176e-01 Mean :5.468 Mean :0.1486 > 3rd Qu.:8.438e-01 3rd Qu.:9.571e-01 3rd Qu.:5.854 3rd Qu.:0.2098 > Max. :1.000e+00 Max. :1.000e+00 Max. :6.907 Max. :0.6902 Running 'idw.R' Comparing 'idw.Rout' to 'idw.Rout.save' ...4,10d3 < < Attaching package: 'zoo' < < The following object(s) are masked from 'package:base': < < as.Date, as.Date.numeric < 12,15c5,8 < Loaded GDAL runtime: GDAL 1.9.0, released 2011/12/29 < Path to GDAL shared files: d:/temp/Rtmpa0vxd6/RLIBS_17647a6b35f1/rgdal/gdal < Loaded PROJ.4 runtime: Rel. 4.7.1, 23 September 2009, [PJ_VERSION: 470] < Path to PROJ.4 shared files: d:/temp/Rtmpa0vxd6/RLIBS_17647a6b35f1/rgdal/proj --- > Loaded GDAL runtime: GDAL 1.7.2, released 2010/04/23 > Path to GDAL shared files: E:\skojejo\Documents/R/win-library/2.12/rgdal/gdal > Loaded PROJ.4 runtime: Rel. 4.7.1, 23 September 2009 > Path to PROJ.4 shared files: E:\skojejo\Documents/R/win-library/2.12/rgdal/proj Running 'interpolate.R' Comparing 'interpolate.Rout' to 'interpolate.Rout.save' ...5,11d4 < < Attaching package: 'zoo' < < The following object(s) are masked from 'package:base': < < as.Date, as.Date.numeric < 13,16c6,9 < Loaded GDAL runtime: GDAL 1.9.0, released 2011/12/29 < Path to GDAL shared files: d:/temp/Rtmpa0vxd6/RLIBS_17647a6b35f1/rgdal/gdal < Loaded PROJ.4 runtime: Rel. 4.7.1, 23 September 2009, [PJ_VERSION: 470] < Path to PROJ.4 shared files: d:/temp/Rtmpa0vxd6/RLIBS_17647a6b35f1/rgdal/proj --- > Loaded GDAL runtime: GDAL 1.7.2, released 2010/04/23 > Path to GDAL shared files: E:\skojejo\Documents/R/win-library/2.12/rgdal/gdal > Loaded PROJ.4 runtime: Rel. 4.7.1, 23 September 2009 > Path to PROJ.4 shared files: E:\skojejo\Documents/R/win-library/2.12/rgdal/proj 30c23 < R 2012-05-25 17:57:10 interpolating 155 observations, 3103 prediction locations --- > R 2011-02-28 17:27:00 interpolating 155 observations, 3103 prediction locations 39,41c32 < 2: In readLines(file(fn, "r")) : < incomplete final line found on 'd:\temp\RtmpCG4GOx\filecdc27e15cd7' < 3: closing unused connection 3 (d:\temp\RtmpCG4GOx\filecdc27e15cd7) --- > 2: closing unused connection 3 (C:\Users\skoiejo\AppData\Local\Temp\RtmphOg4zb\file2714278f) 73c64 < R 2012-05-25 17:57:23 interpolating 155 observations, 3103 prediction locations --- > R 2011-02-28 17:27:16 interpolating 155 observations, 3103 prediction locations 413c404 < R 2012-05-25 17:57:29 interpolating 155 observations, 3103 prediction locations --- > R 2011-02-28 17:27:19 interpolating 155 observations, 3103 prediction locations 416,418d406 < Warning message: < In readLines(file(fn, "r")) : < incomplete final line found on 'd:\temp\RtmpCG4GOx\filecdc3ddc19a6' 428c416 < closing unused connection 3 (d:\temp\RtmpCG4GOx\filecdc3ddc19a6) --- > closing unused connection 3 (C:\Users\skoiejo\AppData\Local\Temp\RtmphOg4zb\file3dce117c) 441c429 < R 2012-05-25 17:57:32 interpolating 30 observations, 24 prediction locations --- > R 2011-02-28 17:27:21 interpolating 30 observations, 24 prediction locations 448c436 < R 2012-05-25 17:57:35 interpolating 30 observations, 24 prediction locations --- > R 2011-02-28 17:27:23 interpolating 30 observations, 24 prediction locations 467,472c455,460 < Min. :179283 Min. :330139 Min. : 141 Min. : 0 < 1st Qu.:179753 1st Qu.:330765 1st Qu.: 231 1st Qu.: 6007 < Median :180222 Median :331704 Median : 528 Median : 655114 < Mean :180222 Mean :331704 Mean : 16670219 Mean : 39155822 < 3rd Qu.:180691 3rd Qu.:332642 3rd Qu.: 4838 3rd Qu.:100000000 < Max. :181161 Max. :333268 Max. :100000000 Max. :100000000 --- > Min. :179283 Min. :330139 Min. :1.409e+02 Min. : 0 > 1st Qu.:179753 1st Qu.:330765 1st Qu.:2.314e+02 1st Qu.: 6007 > Median :180222 Median :331704 Median :5.278e+02 Median : 655114 > Mean :180222 Mean :331704 Mean :1.667e+07 Mean : 39155822 > 3rd Qu.:180691 3rd Qu.:332642 3rd Qu.:4.838e+03 3rd Qu.:100000000 > Max. :181161 Max. :333268 Max. :1.000e+08 Max. :100000000 474,479c462,467 < Min. :0.0000402 Min. : 131.0 < 1st Qu.:0.0056347 1st Qu.: 167.9 < Median :0.0829580 Median : 253.7 < Mean :0.1653267 Mean : 439.5 < 3rd Qu.:0.2797628 3rd Qu.: 572.1 < Max. :0.6133520 Max. :1427.6 --- > Min. :4.021e-05 Min. : 131.0 > 1st Qu.:5.635e-03 1st Qu.: 167.9 > Median :8.296e-02 Median : 253.7 > Mean :1.653e-01 Mean : 439.5 > 3rd Qu.:2.798e-01 3rd Qu.: 572.1 > Max. :6.134e-01 Max. :1427.6 Running 'interpolateBlock.R' Comparing 'interpolateBlock.Rout' to 'interpolateBlock.Rout.save' ...4,10d3 < < Attaching package: 'zoo' < < The following object(s) are masked from 'package:base': < < as.Date, as.Date.numeric < 12,15c5,8 < Loaded GDAL runtime: GDAL 1.9.0, released 2011/12/29 < Path to GDAL shared files: d:/temp/Rtmpa0vxd6/RLIBS_17647a6b35f1/rgdal/gdal < Loaded PROJ.4 runtime: Rel. 4.7.1, 23 September 2009, [PJ_VERSION: 470] < Path to PROJ.4 shared files: d:/temp/Rtmpa0vxd6/RLIBS_17647a6b35f1/rgdal/proj --- > Loaded GDAL runtime: GDAL 1.7.2, released 2010/04/23 > Path to GDAL shared files: E:\skojejo\Documents/R/win-library/2.12/rgdal/gdal > Loaded PROJ.4 runtime: Rel. 4.7.1, 23 September 2009 > Path to PROJ.4 shared files: E:\skojejo\Documents/R/win-library/2.12/rgdal/proj 36c29 < R 2012-05-25 17:57:40 interpolating 155 observations, 48 prediction locations --- > R 2011-02-28 17:22:30 interpolating 155 observations, 48 prediction locations 79c72 < R 2012-05-25 17:57:41 interpolating 155 observations, 48 prediction locations --- > R 2011-02-28 17:22:30 interpolating 155 observations, 48 prediction locations 87c80 < 1st Qu.:179485 1st Qu.:330829 1st Qu.:5.481 1st Qu.:0.020855 --- > 1st Qu.:179485 1st Qu.:330829 1st Qu.:5.481 1st Qu.:0.020854 101c94 < [1] 0.0162806 --- > [1] 0.01628060 Running 'javaR.R' Comparing 'javaR.Rout' to 'javaR.Rout.save' ...4,10d3 < < Attaching package: 'zoo' < < The following object(s) are masked from 'package:base': < < as.Date, as.Date.numeric < 12,15c5,8 < Loaded GDAL runtime: GDAL 1.9.0, released 2011/12/29 < Path to GDAL shared files: d:/temp/Rtmpa0vxd6/RLIBS_17647a6b35f1/rgdal/gdal < Loaded PROJ.4 runtime: Rel. 4.7.1, 23 September 2009, [PJ_VERSION: 470] < Path to PROJ.4 shared files: d:/temp/Rtmpa0vxd6/RLIBS_17647a6b35f1/rgdal/proj --- > Loaded GDAL runtime: GDAL 1.7.2, released 2010/04/23 > Path to GDAL shared files: E:\skojejo\Documents/R/win-library/2.12/rgdal/gdal > Loaded PROJ.4 runtime: Rel. 4.7.1, 23 September 2009 > Path to PROJ.4 shared files: E:\skojejo\Documents/R/win-library/2.12/rgdal/proj 63,68c56,61 < Min. :4021158 Min. :3102915 Min. :4.805 Min. :0.09789 < 1st Qu.:4021733 1st Qu.:3103766 1st Qu.:5.485 1st Qu.:0.14345 < Median :4022423 Median :3104617 Median :5.675 Median :0.33215 < Mean :4022423 Mean :3104617 Mean :5.965 Mean :0.39523 < 3rd Qu.:4023113 3rd Qu.:3105468 3rd Qu.:6.456 3rd Qu.:0.64199 < Max. :4023688 Max. :3106318 Max. :7.497 Max. :0.78320 --- > Min. :4021158 Min. :3102915 Min. :4.805 Min. :0.0979 > 1st Qu.:4021733 1st Qu.:3103766 1st Qu.:5.485 1st Qu.:0.1435 > Median :4022423 Median :3104617 Median :5.675 Median :0.3322 > Mean :4022423 Mean :3104617 Mean :5.965 Mean :0.3952 > 3rd Qu.:4023113 3rd Qu.:3105468 3rd Qu.:6.456 3rd Qu.:0.6420 > Max. :4023688 Max. :3106318 Max. :7.497 Max. :0.7832 71c64 < 1st Qu.:0.136987 1st Qu.:0.2135848 1st Qu.:4.641 --- > 1st Qu.:0.136987 1st Qu.:0.2135847 1st Qu.:4.641 Running 'linearVariogram.R' Comparing 'linearVariogram.Rout' to 'linearVariogram.Rout.save' ...4,10d3 < < Attaching package: 'zoo' < < The following object(s) are masked from 'package:base': < < as.Date, as.Date.numeric < 12,15c5,8 < Loaded GDAL runtime: GDAL 1.9.0, released 2011/12/29 < Path to GDAL shared files: d:/temp/Rtmpa0vxd6/RLIBS_17647a6b35f1/rgdal/gdal < Loaded PROJ.4 runtime: Rel. 4.7.1, 23 September 2009, [PJ_VERSION: 470] < Path to PROJ.4 shared files: d:/temp/Rtmpa0vxd6/RLIBS_17647a6b35f1/rgdal/proj --- > Loaded GDAL runtime: GDAL 1.7.2, released 2010/04/23 > Path to GDAL shared files: E:\skojejo\Documents/R/win-library/2.12/rgdal/gdal > Loaded PROJ.4 runtime: Rel. 4.7.1, 23 September 2009 > Path to PROJ.4 shared files: E:\skojejo\Documents/R/win-library/2.12/rgdal/proj Running 'minimal.R' Comparing 'minimal.Rout' to 'minimal.Rout.save' ...4,10d3 < < Attaching package: 'zoo' < < The following object(s) are masked from 'package:base': < < as.Date, as.Date.numeric < 12,15c5,8 < Loaded GDAL runtime: GDAL 1.9.0, released 2011/12/29 < Path to GDAL shared files: d:/temp/Rtmpa0vxd6/RLIBS_17647a6b35f1/rgdal/gdal < Loaded PROJ.4 runtime: Rel. 4.7.1, 23 September 2009, [PJ_VERSION: 470] < Path to PROJ.4 shared files: d:/temp/Rtmpa0vxd6/RLIBS_17647a6b35f1/rgdal/proj --- > Loaded GDAL runtime: GDAL 1.7.2, released 2010/04/23 > Path to GDAL shared files: E:\skojejo\Documents/R/win-library/2.12/rgdal/gdal > Loaded PROJ.4 runtime: Rel. 4.7.1, 23 September 2009 > Path to PROJ.4 shared files: E:\skojejo\Documents/R/win-library/2.12/rgdal/proj 64,65c57,58 < x 178460 181540 < y 329620 333740 --- > x 178440 181560 > y 329600 333760 Running 'transGaussian.R' Comparing 'transGaussian.Rout' to 'transGaussian.Rout.save' ...5,11d4 < < Attaching package: 'zoo' < < The following object(s) are masked from 'package:base': < < as.Date, as.Date.numeric < 13,16c6,9 < Loaded GDAL runtime: GDAL 1.9.0, released 2011/12/29 < Path to GDAL shared files: d:/temp/Rtmpa0vxd6/RLIBS_17647a6b35f1/rgdal/gdal < Loaded PROJ.4 runtime: Rel. 4.7.1, 23 September 2009, [PJ_VERSION: 470] < Path to PROJ.4 shared files: d:/temp/Rtmpa0vxd6/RLIBS_17647a6b35f1/rgdal/proj --- > Loaded GDAL runtime: GDAL 1.7.2, released 2010/04/23 > Path to GDAL shared files: E:\skojejo\Documents/R/win-library/2.12/rgdal/gdal > Loaded PROJ.4 runtime: Rel. 4.7.1, 23 September 2009 > Path to PROJ.4 shared files: E:\skojejo\Documents/R/win-library/2.12/rgdal/proj 31c24 < R 2012-05-25 17:57:55 interpolating 155 observations, 3103 prediction locations --- > R 2011-02-28 17:22:38 interpolating 155 observations, 3103 prediction locations 33,34c26,27 < Warning messages: < 1: In predictTime(nObs = dim(observations)[1], nPred = dim(coordinates(predictionLocations))[1], : --- > Warning message: > In predictTime(nObs = dim(observations)[1], nPred = dim(coordinates(predictionLocations))[1], : 40,41d32 < 2: In readLines(file(fn, "r")) : < incomplete final line found on 'd:\temp\RtmpicwvXe\file5046230178d' 51c42 < closing unused connection 3 (d:\temp\RtmpicwvXe\file5046230178d) --- > closing unused connection 3 (C:\Users\skoiejo\AppData\Local\Temp\Rtmph7f4zb\file1f9c1f20) Running 'unbiased.R' Comparing 'unbiased.Rout' to 'unbiased.Rout.save' ...5,11d4 < < Attaching package: 'zoo' < < The following object(s) are masked from 'package:base': < < as.Date, as.Date.numeric < 13,16c6,9 < Loaded GDAL runtime: GDAL 1.9.0, released 2011/12/29 < Path to GDAL shared files: d:/temp/Rtmpa0vxd6/RLIBS_17647a6b35f1/rgdal/gdal < Loaded PROJ.4 runtime: Rel. 4.7.1, 23 September 2009, [PJ_VERSION: 470] < Path to PROJ.4 shared files: d:/temp/Rtmpa0vxd6/RLIBS_17647a6b35f1/rgdal/proj --- > Loaded GDAL runtime: GDAL 1.7.2, released 2010/04/23 > Path to GDAL shared files: E:\skojejo\Documents/R/win-library/2.12/rgdal/gdal > Loaded PROJ.4 runtime: Rel. 4.7.1, 23 September 2009 > Path to PROJ.4 shared files: E:\skojejo\Documents/R/win-library/2.12/rgdal/proj 65,70c58,63 < Min. :5.050 Min. :5.207 Min. :0.000000 < 1st Qu.:5.771 1st Qu.:6.101 1st Qu.:0.002605 < Median :6.074 Median :6.665 Median :0.054342 < Mean :6.229 Mean :6.483 Mean :0.143007 < 3rd Qu.:6.637 3rd Qu.:6.871 3rd Qu.:0.234089 < Max. :7.759 Max. :7.604 Max. :0.843378 --- > Min. :5.050 Min. :5.207 Min. :9.661e-10 > 1st Qu.:5.771 1st Qu.:6.101 1st Qu.:2.605e-03 > Median :6.074 Median :6.665 Median :5.434e-02 > Mean :6.229 Mean :6.483 Mean :1.430e-01 > 3rd Qu.:6.637 3rd Qu.:6.871 3rd Qu.:2.341e-01 > Max. :7.759 Max. :7.604 Max. :8.434e-01 * checking PDF version of manual ... OK NOTE: There was 1 note. See 'd:/Rcompile/CRANpkg/local/2.15/intamap.Rcheck/00check.log' for details.