* using log directory 'd:/Rcompile/CRANpkg/local/2.15/randomForest.Rcheck' * using R version 2.15.0 (2012-03-30) * using platform: x86_64-pc-mingw32 (64-bit) * using session charset: ISO8859-1 * checking for file 'randomForest/DESCRIPTION' ... OK * this is package 'randomForest' version '4.6-6' * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking whether package 'randomForest' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking for portable file names ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * loading checks for arch 'i386' ** checking whether the package can be loaded ... OK ** checking whether the package can be loaded with stated dependencies ... OK ** checking whether the package can be unloaded cleanly ... OK ** checking whether the namespace can be loaded with stated dependencies ... OK ** checking whether the namespace can be unloaded cleanly ... OK * loading checks for arch 'x64' ** checking whether the package can be loaded ... OK ** checking whether the package can be loaded with stated dependencies ... OK ** checking whether the package can be unloaded cleanly ... OK ** checking whether the namespace can be loaded with stated dependencies ... OK ** checking whether the namespace can be unloaded cleanly ... OK * checking for unstated dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... NOTE predict.randomForest: warning in matrix(t1$countts, nr = nclass, nc = ntest): partial argument match of 'nr' to 'nrow' predict.randomForest: warning in matrix(t1$countts, nr = nclass, nc = ntest): partial argument match of 'nc' to 'ncol' print.randomForest: warning in round(x$err.rate[x$ntree, "OOB"] * 100, dig = 2): partial argument match of 'dig' to 'digits' print.randomForest: warning in round(x$test$err.rate[x$ntree, "Test"] * 100, dig = 2): partial argument match of 'dig' to 'digits' print.randomForest: warning in round(100 * x$rsq[length(x$rsq)], dig = 2): partial argument match of 'dig' to 'digits' print.randomForest: warning in round(x$test$mse[length(x$test$mse)], dig = 2): partial argument match of 'dig' to 'digits' print.randomForest: warning in round(100 * x$test$rsq[length(x$test$rsq)], dig = 2): partial argument match of 'dig' to 'digits' randomForest.default: warning in factor(rfout$outcl, levels = 1:nclass, label = levels(y)): partial argument match of 'label' to 'labels' randomForest.default: warning in factor(rfout$outclts, levels = 1:nclass, label = levels(y)): partial argument match of 'label' to 'labels' randomForest.default: warning in matrix(rfout$nodestatus, nc = ntree): partial argument match of 'nc' to 'ncol' randomForest.default: warning in matrix(rfout$bestvar, nc = ntree): partial argument match of 'nc' to 'ncol' randomForest.default: warning in matrix(rfout$nodepred, nc = ntree): partial argument match of 'nc' to 'ncol' randomForest.default: warning in matrix(rfout$xbestsplit, nc = ntree): partial argument match of 'nc' to 'ncol' randomForest.formula: warning in match.call(expand = FALSE): partial argument match of 'expand' to 'expand.dots' rfImpute.formula: warning in match.call(expand = FALSE): partial argument match of 'expand' to 'expand.dots' * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of 'data' directory ... OK * checking data for non-ASCII characters ... OK * checking data for ASCII and uncompressed saves ... OK * checking line endings in C/C++/Fortran sources/headers ... OK * checking line endings in Makefiles ... OK * checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK * checking compiled code ... OK * checking examples ... ** running examples for arch 'i386' ... OK ** running examples for arch 'x64' ... OK * checking PDF version of manual ... OK NOTE: There was 1 note. See 'd:/Rcompile/CRANpkg/local/2.15/randomForest.Rcheck/00check.log' for details.