* using log directory 'd:/Rcompile/CRANpkg/local/2.15/sca.Rcheck'
* using R version 2.15.0 (2012-03-30)
* using platform: x86_64-pc-mingw32 (64-bit)
* using session charset: ISO8859-1
* checking for file 'sca/DESCRIPTION' ... OK
* this is package 'sca' version '0.8-8'
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking whether package 'sca' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* loading checks for arch 'i386'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* loading checks for arch 'x64'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking examples ...
** running examples for arch 'i386' ... OK
** running examples for arch 'x64' ... OK
* checking for unstated dependencies in tests ... OK
* checking tests ...
** running tests for arch 'i386' OK
  Running '3ex.R'
  Comparing '3ex.Rout' to '3ex.Rout.save' ... OK
  Running 'artif3.R'
  Comparing 'artif3.Rout' to 'artif3.Rout.save' ...137,140c137,140
<  [6,]           1 , + ,
<  [7,]           , 1 + +
<  [8,]           + + 1 +
<  [9,]           , + + 1
---
>  [6,]           1 + + ,
>  [7,]           + 1 + ,
>  [8,]           + + 1 ,
>  [9,]           , , , 1
157,159c157,159
< V1  0  1  0  0  1
< V2  0  1  0  0  0
< V3  0  1  0  0 -1
---
> V1  0  1  0  1  0
> V2  0  1  0  1  0
> V3  0  1  0 -2  0
162,163c162,163
< V6  1  0  0  1  0
< V7  1  0  0  0  0
---
> V6  1  0  0  0  0
> V7  1  0  0  0  1
165c165
< V9  1  0  0 -1  0
---
> V9  1  0  0  0 -1
168c168
<  38.67 % 28.59 % 20.13 % 3.26 % 2.60 % 
---
>  38.68 % 28.60 % 20.12 % 3.30 % 2.45 % 
170c170
<  37.91 % 28.15 % 20.69 % 2.90 % 2.62 % 
---
>  37.93 % 28.14 % 20.69 % 2.72 % 2.77 % 
172,174c172,174
< Extracted variability PCA: 93.24 % 
< Extracted variability SCA: 91.56 % 
< Optimality SCA           : 98.20 % 
---
> Extracted variability PCA: 93.16 % 
> Extracted variability SCA: 91.40 % 
> Optimality SCA           : 98.11 % 
178,182c178,182
< B1 1.00  0.05  0.08  0.00  0.09
< B2 0.05  1.00  0.10 -0.06  0.00
< B3 0.08  0.10  1.00 -0.27 -0.11
< D4 0.00 -0.06 -0.27  1.00  0.14
< D5 0.09  0.00 -0.11  0.14  1.00
---
> B1 1.00  0.05  0.08  0.08  0.02
> B2 0.05  1.00  0.10  0.01 -0.02
> B3 0.08  0.10  1.00  0.13 -0.29
> D4 0.08  0.01  0.13  1.00 -0.26
> D5 0.02 -0.02 -0.29 -0.26  1.00
184c184
< Max (abs) correlation: 0.27 ( B3 - D4 ) 
---
> Max (abs) correlation: 0.29 ( B3 - D5 ) 
197,198c197,198
< Number of block-components  : 3 
< Number of diff.-components  : 2 
---
> Number of block-components  : 2 
> Number of diff.-components  : 3 
201,208c201,208
<    B1 B2 B3 D4 D5
< V1  0  1  0  0  1
< V2  0  1  0  0  0
< V3  0  1  0  0 -1
< V4  0  0  1  0  0
< V5  0  0  1  0  0
< V6  1  0  0  1  0
< V7  1  0  0  0  0
---
>    B1 B2 D3 D4 D5
> V1  0  1  2  1  0
> V2  0  1  2  1  0
> V3  0  1  2 -2  0
> V4  0  1 -3  0  0
> V5  0  1 -3  0  0
> V6  1  0  0  0  0
> V7  1  0  0  0  1
210c210
< V9  1  0  0 -1  0
---
> V9  1  0  0  0 -1
213c213
<  38.67 % 28.59 % 20.13 % 3.26 % 2.60 % 
---
>  38.68 % 28.60 % 20.12 % 3.30 % 2.45 % 
215c215
<  37.91 % 28.15 % 20.69 % 2.90 % 2.62 % 
---
>  37.93 % 27.52 % 21.30 % 2.72 % 2.77 % 
217,219c217,219
< Extracted variability PCA: 93.24 % 
< Extracted variability SCA: 91.56 % 
< Optimality SCA           : 98.20 % 
---
> Extracted variability PCA: 93.16 % 
> Extracted variability SCA: 91.21 % 
> Optimality SCA           : 97.91 % 
222,227c222,227
<      B1    B2    B3    D4    D5
< B1 1.00  0.05  0.08  0.00  0.09
< B2 0.05  1.00  0.10 -0.06  0.00
< B3 0.08  0.10  1.00 -0.27 -0.11
< D4 0.00 -0.06 -0.27  1.00  0.14
< D5 0.09  0.00 -0.11  0.14  1.00
---
>       B1    B2    D3    D4    D5
> B1  1.00  0.08 -0.03  0.08  0.02
> B2  0.08  1.00  0.13  0.08 -0.18
> D3 -0.03  0.13  1.00 -0.09  0.21
> D4  0.08  0.08 -0.09  1.00 -0.26
> D5  0.02 -0.18  0.21 -0.26  1.00
229c229
< Max (abs) correlation: 0.27 ( B3 - D4 ) 
---
> Max (abs) correlation: 0.26 ( D4 - D5 ) 
236c236
<   .. ..$ : chr [1:5] "B1" "B2" "B3" "D4" ...
---
>   .. ..$ : chr [1:5] "B1" "B2" "D3" "D4" ...
240c240
<   .. ..$ : chr [1:5] "B1" "B2" "B3" "D4" ...
---
>   .. ..$ : chr [1:5] "B1" "B2" "D3" "D4" ...
242,244c242,244
<   ..$ varpc : num [1:5] 0.3867 0.2859 0.2013 0.0326 0.026
<   ..$ varsc : Named num [1:5] 0.3791 0.2815 0.2069 0.029 0.0262
<   .. ..- attr(*, "names")= chr [1:5] "B1" "B2" "B3" "D4" ...
---
>   ..$ varpc : num [1:5] 0.3868 0.286 0.2012 0.033 0.0245
>   ..$ varsc : Named num [1:5] 0.3793 0.2752 0.213 0.0272 0.0277
>   .. ..- attr(*, "names")= chr [1:5] "B1" "B2" "D3" "D4" ...
246,248c246,248
<   ..$ cumsc : num 0.916
<   ..$ opt   : num 0.982
<   ..$ corsc : num [1:5, 1:5] 1 0.04578 0.08229 0.00156 0.09325 ...
---
>   ..$ cumsc : num 0.912
>   ..$ opt   : num 0.979
>   ..$ corsc : num [1:5, 1:5] 1 0.0803 -0.0293 0.0762 0.0197 ...
250,251c250,251
<   .. .. ..$ : chr [1:5] "B1" "B2" "B3" "D4" ...
<   .. .. ..$ : chr [1:5] "B1" "B2" "B3" "D4" ...
---
>   .. .. ..$ : chr [1:5] "B1" "B2" "D3" "D4" ...
>   .. .. ..$ : chr [1:5] "B1" "B2" "D3" "D4" ...
253,257c253,257
<   .. ..$ row: chr "B3"
<   .. ..$ col: chr "D4"
<   .. ..$ val: num 0.275
<  $ nblock     : num 3
<  $ ndiff      : num 2
---
>   .. ..$ row: chr "D4"
>   .. ..$ col: chr "D5"
>   .. ..$ val: num 0.262
>  $ nblock     : num 2
>  $ ndiff      : num 3
262c262
<  $ vardata    : num [1:9, 1:9] 1 0.7694 0.7638 0.0761 0.0515 ...
---
>  $ vardata    : num [1:9, 1:9] 1 0.777 0.769 0.14 0.108 ...
291,296c291,296
< [13,]                         1 * + * + *                        
< [14,]                         * 1 + + * *                        
< [15,]                         + + 1 + + +                        
< [16,]                         * + + 1 + *                        
< [17,]                         + * + + 1 +                        
< [18,]                         * * + * + 1                        
---
> [13,]                         1 + * + * +                        
> [14,]                         + 1 + + + *                        
> [15,]                         * + 1 + + *                        
> [16,]                         + + + 1 + *                        
> [17,]                         * + + + 1 *                        
> [18,]                         + * * * * 1                        
299,308c299,308
< [21,]                                         1 + + + + + + + + +
< [22,]                                         + 1 + + + + , , + +
< [23,]                                         + + 1 , + + + , + +
< [24,]                                         + + , 1 , + , , + ,
< [25,]                                         + + + , 1 + , , + +
< [26,]                                         + + + + + 1 + , + +
< [27,]                                         + , + , , + 1 , + +
< [28,]                                         + , , , , , , 1 , +
< [29,]                                         + + + + + + + , 1 +
< [30,]                                         + + + , + + + + + 1
---
> [21,]                                         1 , , + + , + + + +
> [22,]                                         , 1 , + + , , + + +
> [23,]                                         , , 1 , , , + + , ,
> [24,]                                         + + , 1 + + + + + +
> [25,]                                         + + , + 1 + + + + +
> [26,]                                         , , , + + 1 + + + +
> [27,]                                         + , + + + + 1 + + +
> [28,]                                         + + + + + + + 1 + +
> [29,]                                         + + , + + + + + 1 +
> [30,]                                         + + , + + + + + + 1
325,330c325,330
< V1   1  0  0  0  0
< V2   1  0  0  0  0
< V3   1  0  0  0  2
< V4   1  0  0  0  2
< V5   1  0  0  0  2
< V6   1  0  0  0 -3
---
> V1   1  0  0  0  5
> V2   1  0  0  0  5
> V3   1  0  0  0 -4
> V4   1  0  0  0  0
> V5   1  0  0  0 -4
> V6   1  0  0  0 -4
332c332
< V8   1  0  0  0  0
---
> V8   1  0  0  0  5
334,336c334,336
< V10  1  0  0  0  0
< V11  1  0  0  0  0
< V12  1  0  0  0 -3
---
> V10  1  0  0  0 -4
> V11  1  0  0  0  5
> V12  1  0  0  0 -4
357c357
<  30.04 % 27.58 % 18.22 % 6.38 % 1.19 % 
---
>  30.05 % 27.58 % 18.22 % 6.38 % 1.19 % 
361,362c361,362
< Extracted variability PCA: 83.41 % 
< Extracted variability SCA: 83.19 % 
---
> Extracted variability PCA: 83.42 % 
> Extracted variability SCA: 83.21 % 
367,371c367,371
< B1  1.00 -0.01 -0.04  0.00  0.01
< B2 -0.01  1.00 -0.01 -0.01  0.04
< B3 -0.04 -0.01  1.00 -0.01  0.02
< B4  0.00 -0.01 -0.01  1.00 -0.05
< D5  0.01  0.04  0.02 -0.05  1.00
---
> B1  1.00 -0.01 -0.04  0.00 -0.01
> B2 -0.01  1.00 -0.01 -0.01 -0.01
> B3 -0.04 -0.01  1.00 -0.01  0.00
> B4  0.00 -0.01 -0.01  1.00  0.02
> D5 -0.01 -0.01  0.00  0.02  1.00
373c373
< Max (abs) correlation: 0.05 ( B4 - D5 ) 
---
> Max (abs) correlation: 0.04 ( B1 - B3 ) 
391,396c391,396
< V1   1  0  0  0  0
< V2   1  0  0  0  0
< V3   1  0  0  0  2
< V4   1  0  0  0  2
< V5   1  0  0  0  2
< V6   1  0  0  0 -3
---
> V1   1  0  0  0  5
> V2   1  0  0  0  5
> V3   1  0  0  0 -4
> V4   1  0  0  0  0
> V5   1  0  0  0 -4
> V6   1  0  0  0 -4
398c398
< V8   1  0  0  0  0
---
> V8   1  0  0  0  5
400,402c400,402
< V10  1  0  0  0  0
< V11  1  0  0  0  0
< V12  1  0  0  0 -3
---
> V10  1  0  0  0 -4
> V11  1  0  0  0  5
> V12  1  0  0  0 -4
423c423
<  30.04 % 27.58 % 18.22 % 6.38 % 1.19 % 
---
>  30.05 % 27.58 % 18.22 % 6.38 % 1.19 % 
427,428c427,428
< Extracted variability PCA: 83.41 % 
< Extracted variability SCA: 83.19 % 
---
> Extracted variability PCA: 83.42 % 
> Extracted variability SCA: 83.21 % 
433,437c433,437
< B1  1.00 -0.01 -0.04  0.00  0.01
< B2 -0.01  1.00 -0.01 -0.01  0.04
< B3 -0.04 -0.01  1.00 -0.01  0.02
< B4  0.00 -0.01 -0.01  1.00 -0.05
< D5  0.01  0.04  0.02 -0.05  1.00
---
> B1  1.00 -0.01 -0.04  0.00 -0.01
> B2 -0.01  1.00 -0.01 -0.01 -0.01
> B3 -0.04 -0.01  1.00 -0.01  0.00
> B4  0.00 -0.01 -0.01  1.00  0.02
> D5 -0.01 -0.01  0.00  0.02  1.00
439c439
< Max (abs) correlation: 0.05 ( B4 - D5 ) 
---
> Max (abs) correlation: 0.04 ( B1 - B3 ) 
452c452
<   ..$ varpc : num [1:5] 0.3004 0.2758 0.1822 0.0638 0.0119
---
>   ..$ varpc : num [1:5] 0.3005 0.2758 0.1822 0.0638 0.0119
458c458
<   ..$ corsc : num [1:5, 1:5] 1 -0.01233 -0.04419 -0.00432 0.01471 ...
---
>   ..$ corsc : num [1:5, 1:5] 1 -0.01251 -0.04427 -0.00435 -0.0091 ...
463,465c463,465
<   .. ..$ row: chr "B4"
<   .. ..$ col: chr "D5"
<   .. ..$ val: num 0.0515
---
>   .. ..$ row: chr "B1"
>   .. ..$ col: chr "B3"
>   .. ..$ val: num 0.0443
472c472
<  $ vardata    : num [1:30, 1:30] 1 0.729 0.714 0.707 0.713 ...
---
>  $ vardata    : num [1:30, 1:30] 1 0.709 0.694 0.712 0.716 ...
** running tests for arch 'x64' OK
  Running '3ex.R'
  Comparing '3ex.Rout' to '3ex.Rout.save' ... OK
  Running 'artif3.R'
  Comparing 'artif3.Rout' to 'artif3.Rout.save' ... OK
* checking PDF version of manual ... OK