* using log directory 'd:/Rcompile/CRANpkg/local/2.15/sensitivityPStrat.Rcheck' * using R version 2.15.0 (2012-03-30) * using platform: x86_64-pc-mingw32 (64-bit) * using session charset: ISO8859-1 * checking for file 'sensitivityPStrat/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'sensitivityPStrat' version '1.0-5' * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking whether package 'sensitivityPStrat' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking for portable file names ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * loading checks for arch 'i386' ** checking whether the package can be loaded ... OK ** checking whether the package can be loaded with stated dependencies ... OK ** checking whether the package can be unloaded cleanly ... OK ** checking whether the namespace can be loaded with stated dependencies ... OK ** checking whether the namespace can be unloaded cleanly ... OK * loading checks for arch 'x64' ** checking whether the package can be loaded ... OK ** checking whether the package can be loaded with stated dependencies ... OK ** checking whether the package can be unloaded cleanly ... OK ** checking whether the namespace can be loaded with stated dependencies ... OK ** checking whether the namespace can be unloaded cleanly ... OK * checking for unstated dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... NOTE .calcSGLBetaCoeff: warning in seq.int(from = 0L, along = q.index): partial argument match of 'along' to 'along.with' plot.sensitivity.2.0d: warning in axis(side = 1, at = beta0, label = format(beta0, digits = 1, trim = TRUE, drop0trailing = TRUE), line = NA): partial argument match of 'label' to 'labels' plot.sensitivity.2.0d: warning in axis(side = 2, at = beta1, label = format(beta1, digits = 1, trim = TRUE, drop0trailing = TRUE), line = NA): partial argument match of 'label' to 'labels' sensitivityGBH : calc.alphaAndW: warning in .calc.w(alpha = alphahat, beta = beta * y): partial argument match of 'beta' to 'beta.y' * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of 'data' directory ... OK * checking data for non-ASCII characters ... OK * checking data for ASCII and uncompressed saves ... OK * checking line endings in C/C++/Fortran sources/headers ... OK * checking line endings in Makefiles ... OK * checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK * checking compiled code ... OK * checking examples ... ** running examples for arch 'i386' ... OK ** running examples for arch 'x64' ... OK * checking for unstated dependencies in tests ... OK * checking tests ... ** running tests for arch 'i386' OK Running '001sensitivityHHS.R' Running '002sensitivityGBH.R' Running '003sensitivityJR.R' Running '011sensitivitySGL.R' Running '012sensitivitySGD.R' ** running tests for arch 'x64' OK Running '001sensitivityHHS.R' Running '002sensitivityGBH.R' Running '003sensitivityJR.R' Running '011sensitivitySGL.R' Running '012sensitivitySGD.R' * checking PDF version of manual ... OK NOTE: There was 1 note. See 'd:/Rcompile/CRANpkg/local/2.15/sensitivityPStrat.Rcheck/00check.log' for details.