* using log directory 'd:/Rcompile/CRANpkg/local/2.15/sna.Rcheck'
* using R version 2.15.0 (2012-03-30)
* using platform: x86_64-pc-mingw32 (64-bit)
* using session charset: ISO8859-1
* checking for file 'sna/DESCRIPTION' ... OK
* this is package 'sna' version '2.2-0'
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... NOTE
As from R 2.14.0 all packages need a namespace.
One will be generated on installation, but it is better to handcraft a
NAMESPACE file: R CMD build will produce a suitable starting point.
CRAN requires a NAMESPACE file for all submissions.
* checking whether package 'sna' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* loading checks for arch 'i386'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
* loading checks for arch 'x64'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... NOTE
File 'sna/R/zzz.R':
  .First.lib calls:
    cat(paste(substring(ehelp[4], first = 16), "\n", "Version ",     substring(ehelp[2], first = 16), " created on ", substring(ehelp[3],         first = 16), ".\n", sep = ""))
    cat(paste("copyright (c) 2005, Carter T. Butts, University of California-Irvine\n",     sep = ""))
    cat("Type help(package=\"sna\") to get started.\n")

Package startup functions should use 'packageStartupMessage' to
  generate messages.
See section 'Good practice' in ?.onAttach.

bn: warning in matrix(0, nr = n - 1, nc = 4): partial argument match of
  'nr' to 'nrow'
bn: warning in matrix(0, nr = n - 1, nc = 4): partial argument match of
  'nc' to 'ncol'
bn: warning in matrix(.C("bn_dyadstats_R", as.integer(dat),
  as.double(n), stats = as.double(stats), PACKAGE = "sna")$stats, nc =
  4): partial argument match of 'nc' to 'ncol'
bn: warning in matrix(0, nr = n, nc = n): partial argument match of
  'nr' to 'nrow'
bn: warning in matrix(0, nr = n, nc = n): partial argument match of
  'nc' to 'ncol'
bn: warning in matrix(.C("bn_triadstats_R", as.integer(dat),
  as.double(n), stats = as.double(stats), PACKAGE = "sna")$stats, nr =
  n, nc = n): partial argument match of 'nr' to 'nrow'
bn: warning in matrix(.C("bn_triadstats_R", as.integer(dat),
  as.double(n), stats = as.double(stats), PACKAGE = "sna")$stats, nr =
  n, nc = n): partial argument match of 'nc' to 'ncol'
cug.test : <anonymous>: warning in rgraph(n, 1, mode = mode, diag =
  diag, tp = 0.5, return.as.edgelist = TRUE): partial argument match of
  'tp' to 'tprob'
cug.test : <anonymous>: warning in rgraph(n, 1, mode = mode, diag =
  diag, tp = 0.5): partial argument match of 'tp' to 'tprob'
dyad.census: warning in matrix(man, nr = 1): partial argument match of
  'nr' to 'nrow'
gapply: warning in matrix(STATS, nc = 1): partial argument match of
  'nc' to 'ncol'
gplot3d: warning in rgl.bg(col = bg.col): partial argument match of
  'col' to 'color'
gplot3d.arrow: warning in matrix(a, nc = 3): partial argument match of
  'nc' to 'ncol'
gplot3d.arrow: warning in matrix(b, nc = 3): partial argument match of
  'nc' to 'ncol'
gplot3d.loop: warning in matrix(a, nc = 3): partial argument match of
  'nc' to 'ncol'
gvectorize: warning in matrix(TRUE, nr = dim(d)[2] * dim(d)[3], nc =
  dim(d)[1]): partial argument match of 'nr' to 'nrow'
gvectorize: warning in matrix(TRUE, nr = dim(d)[2] * dim(d)[3], nc =
  dim(d)[1]): partial argument match of 'nc' to 'ncol'
infocent: warning in matrix(0, nr = dim(dat)[2], nc = dim(dat)[2]):
  partial argument match of 'nr' to 'nrow'
infocent: warning in matrix(0, nr = dim(dat)[2], nc = dim(dat)[2]):
  partial argument match of 'nc' to 'ncol'
maxflow: warning in matrix(nr = length(src), nc = length(sink)):
  partial argument match of 'nr' to 'nrow'
maxflow: warning in matrix(nr = length(src), nc = length(sink)):
  partial argument match of 'nc' to 'ncol'
netlm : gfit: warning in matrix(x, nc = 1): partial argument match of
  'nc' to 'ncol'
netlm: warning in rgraph(n, tp = gden(g[[i + 1]], mode = mode, diag =
  diag), mode = mode, diag = diag): partial argument match of 'tp' to
  'tprob'
netlogit : gfit: warning in matrix(x, nc = 1): partial argument match
  of 'nc' to 'ncol'
netlogit : gfitlm: warning in matrix(x, nc = 1): partial argument match
  of 'nc' to 'ncol'
netlogit: warning in rgraph(n, tp = gden(g[[i + 1]], mode = mode, diag
  = diag), mode = mode, diag = diag): partial argument match of 'tp' to
  'tprob'
plot.lnam: warning in matrix(0, nc = x$df.total, nr = x$df.total):
  partial argument match of 'nr' to 'nrow'
plot.lnam: warning in matrix(0, nc = x$df.total, nr = x$df.total):
  partial argument match of 'nc' to 'ncol'
print.bn: warning in matrix(c(x$d, x$pi, x$sigma, x$rho), nc = 1):
  partial argument match of 'nc' to 'ncol'
print.netlm: warning in formatC(1 - pf(fstatistic[1], fstatistic[2],
  fstatistic[3]), dig = 4): partial argument match of 'dig' to 'digits'
print.summary.bn: warning in matrix(c(x$d, x$pi, x$sigma, x$rho), nc =
  1): partial argument match of 'nc' to 'ncol'
print.summary.netlm: warning in formatC(1 - pf(fstatistic[1],
  fstatistic[2], fstatistic[3]), dig = 4): partial argument match of
  'dig' to 'digits'
rgnm: warning in matrix(nr = 0, nc = 3): partial argument match of 'nr'
  to 'nrow'
rgnm: warning in matrix(nr = 0, nc = 3): partial argument match of 'nc'
  to 'ncol'
rgnm: warning in matrix(c(1, 1, 1), nr = 1, nc = 3): partial argument
  match of 'nr' to 'nrow'
rgnm: warning in matrix(c(1, 1, 1), nr = 1, nc = 3): partial argument
  match of 'nc' to 'ncol'
triad.census: warning in matrix(nr = length(dat), nc = length(tc)):
  partial argument match of 'nr' to 'nrow'
triad.census: warning in matrix(nr = length(dat), nc = length(tc)):
  partial argument match of 'nc' to 'ncol'
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking compiled code ... OK
* checking examples ...
** running examples for arch 'i386' ... OK
** running examples for arch 'x64' ... OK
* checking PDF version of manual ... OK
NOTE: There were 2 notes.
See
  'd:/Rcompile/CRANpkg/local/2.15/sna.Rcheck/00check.log'
for details.