* using log directory 'd:/Rcompile/CRANpkg/local/2.14/ISwR.Rcheck'
* using R version 2.14.2 (2012-02-29)
* using platform: i386-pc-mingw32 (32-bit)
* using session charset: ISO8859-1
* checking for file 'ISwR/DESCRIPTION' ... OK
* this is package 'ISwR' version '2.0-6'
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking whether package 'ISwR' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking examples ... OK
* checking for unstated dependencies in tests ... OK
* checking tests ... OK
  Running 'allexercises.R'
  Comparing 'allexercises.Rout' to 'allexercises.Rout.save' ...214c214
< W = 0.9687, p-value = 1.376e-06
---
> W = 0.9687, p-value = 1.377e-06
724c724
<  60-64:4   Hist.ctr.    :6   Median :104.0   Median : 169261                 
---
>  60-64:4   Hist.ctr.    :6   Median :104.0   Median : 169260                 
1035c1035
< id     15     51138 70816 252.47  2.4254 0.05287 .
---
> id     15     51137 70816 252.47  2.4254 0.05287 .
1045c1045
< id        15  51138  3409.2  2.4254 0.05287 .
---
> id        15  51137  3409.2  2.4254 0.05287 .
1109c1109
< -1.72917 -0.22917 -0.08333  0.23438  2.41667 
---
> -1.72917 -0.22917 -0.08333  0.23437  2.41667 
2164c2164
< alpha 180.77123    1.93392  93.474  < 2e-16 ***
---
> alpha 180.77122    1.93392  93.474  < 2e-16 ***
2167c2167
< da     62.03693   11.26005   5.509 4.46e-08 ***
---
> da     62.03692   11.26004   5.509 4.46e-08 ***
2176c2176
< Achieved convergence tolerance: 1.666e-06 
---
> Achieved convergence tolerance: 2.166e-06 
2213c2213
< ec50  0.03655499  1.3770101
---
> ec50  0.03655498  1.3770101
2223c2223
< ec50  0.05332677  1.377884
---
> ec50  0.05332676  1.377884
2237c2237
< la   -0.02688    0.42805  -0.063  0.95196   
---
> la   -0.02689    0.42805  -0.063  0.95196   
  Running 'allscripts.R'
  Comparing 'allscripts.Rout' to 'allscripts.Rout.save' ...486c486
< [1] 171
---
> [1] 170
518c518
< [1] "d:/RCompile/CRANpkg/lib/2.14/ISwR/rawdata/thuesen.txt"
---
> [1] "/Users/pd/BIOSTAT/books/ISWR-2nd-ed/ISwR.Rcheck/ISwR/rawdata/thuesen.txt"
1366c1366
< (Intercept)            316.63      16.16  19.588 4.65e-14 ***
---
> (Intercept)            316.62      16.16  19.588 4.65e-14 ***
1368c1368
< ventilationO2,24h      -38.63      26.06  -1.482   0.1548    
---
> ventilationO2,24h      -38.62      26.06  -1.482   0.1548    
4171c4171
< Achieved convergence tolerance: 1.08e-08 
---
> Achieved convergence tolerance: 1.199e-08 
4208c4208
< Achieved convergence tolerance: 5.281e-06 
---
> Achieved convergence tolerance: 5.27e-06 
4224c4224
< alpha 255.97696   15.03921  17.021   <2e-16 ***
---
> alpha 255.97694   15.03920  17.021   <2e-16 ***
4233c4233
< Achieved convergence tolerance: 2.794e-06 
---
> Achieved convergence tolerance: 2.948e-06 
4278c4278
< Achieved convergence tolerance: 5.533e-06 
---
> Achieved convergence tolerance: 5.472e-06 
4287c4287
< alpha 233.5007561 294.76267646
---
> alpha 233.5007561 294.76267631
4292,4294c4292,4294
< alpha 226.50065194 285.4532596
< beta    1.13125578   1.2477285
< gamma   0.05443818   0.0862269
---
> alpha 226.50064553 285.45324094
> beta    1.13125578   1.24772849
> gamma   0.05443818   0.08622691
* checking PDF version of manual ... OK