* using log directory 'd:/Rcompile/CRANpkg/local/2.14/NCBI2R.Rcheck' * using R version 2.14.2 (2012-02-29) * using platform: i386-pc-mingw32 (32-bit) * using session charset: ISO8859-1 * checking for file 'NCBI2R/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'NCBI2R' version '1.3.5' * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking whether package 'NCBI2R' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking for portable file names ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking for unstated dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of 'data' directory ... OK * checking data for non-ASCII characters ... OK * checking data for ASCII and uncompressed saves ... OK * checking examples ... ERROR Running examples in 'NCBI2R-Ex.R' failed The error most likely occurred in: > ### Name: AdjustRangeAroundGene > ### Title: Adjusts gene position > ### Aliases: AdjustRangeAroundGene > > ### ** Examples > > idnumber<-GetIDs("CLN5[SYM] human") NCBI2R is the current version. 1.3.5 > ss<-GetGeneInfo(idnumber) NCBI2R GetGeneInfo Batch 1 of 1 of max size 200 99% NCBI2R GetGeneInfo Batch 1 of 1 of max size 200 99% NCBI2R GetGeneInfo Batch 1 of 1 of max size 200 99% NCBI2R GetGeneInfo Batch 1 of 1 of max size 200 99% NCBI2R GetGeneInfo Batch 1 of 1 of max size 200 99% NCBI2R GetGeneInfo Batch 1 of 1 of max size 200 99% NCBI2R GetGeneInfo Batch 1 of 1 of max size 200 99% NCBI2R GetGeneInfo Batch 1 of 1 of max size 200 99% NCBI2R GetGeneInfo Batch 1 of 1 of max size 200 99% NCBI2R GetGeneInfo Batch 1 of 1 of max size 200 99% NCBI2R GetGeneInfo Batch 1 of 1 of max size 200 99% NCBI2R GetGeneInfo Batch 1 of 1 of max size 200 99% NCBI2R GetGeneInfo Batch 1 of 1 of max size 200 99% NCBI2R GetGeneInfo Batch 1 of 1 of max size 200 99% NCBI2R GetGeneInfo Batch 1 of 1 of max size 200 99% NCBI2R GetGeneInfo Batch 1 of 1 of max size 200 99% NCBI2R GetGeneInfo Batch 1 of 1 of max size 200 99% NCBI2R GetGeneInfo Batch 1 of 1 of max size 200 99% NCBI2R GetGeneInfo Batch 1 of 1 of max size 200 99% NCBI2R GetGeneInfo Batch 1 of 1 of max size 200 99% NCBI2R GetGeneInfo Batch 1 of 1 of max size 200 99% NCBI2R GetGeneInfo Batch 1 of 1 of max size 200 99% NCBI2R GetGeneInfo Batch 1 of 1 of max size 200 99% NCBI2R GetGeneInfo Batch 1 of 1 of max size 200 99% NCBI2R GetGeneInfo Batch 1 of 1 of max size 200 99% NCBI2R GetGeneInfo Batch 1 of 1 of max size 200 99% NCBI2R GetGeneInfo Batch 1 of 1 of max size 200 99% NCBI2R GetGeneInfo Batch 1 of 1 of max size 200 99% NCBI2R GetGeneInfo Batch 1 of 1 of max size 200 99% NCBI2R GetGeneInfo Batch 1 of 1 of max size 200 99% NCBI2R GetGeneInfo Batch 1 of 1 of max size 200 99% NCBI2R GetGeneInfo Batch 1 of 1 of max size 200 99% NCBI2R GetGeneInfo Batch 1 of 1 of max size 200 99% NCBI2R GetGeneInfo Batch 1 of 1 of max size 200 99% NCBI2R GetGeneInfo Batch 1 of 1 of max size 200 98% NCBI2R GetGeneInfo Batch 1 of 1 of max size 200 98% NCBI2R GetGeneInfo Batch 1 of 1 of max size 200 98% NCBI2R GetGeneInfo Batch 1 of 1 of max size 200 98% NCBI2R GetGeneInfo Batch 1 of 1 of max size 200 98% NCBI2R GetGeneInfo Batch 1 of 1 of max size 200 98% NCBI2R GetGeneInfo Batch 1 of 1 of max size 200 98% NCBI2R GetGeneInfo Batch 1 of 1 of max size 200 98% NCBI2R GetGeneInfo Batch 1 of 1 of max size 200 98% NCBI2R GetGeneInfo Batch 1 of 1 of max size 200 98% NCBI2R GetGeneInfo Batch 1 of 1 of max size 200 98% NCBI2R GetGeneInfo Batch 1 of 1 of max size 200 98% NCBI2R GetGeneInfo Batch 1 of 1 of max size 200 98% NCBI2R GetGeneInfo Batch 1 of 1 of max size 200 98% NCBI2R GetGeneInfo Batch 1 of 1 of max size 200 98% NCBI2R GetGeneInfo Batch 1 of 1 of max size 200 98% NCBI2R GetGeneInfo Batch 1 of 1 of max size 200 98% NCBI2R GetGeneInfo Batch 1 of 1 of max size 200 98% NCBI2R GetGeneInfo Batch 1 of 1 of max size 200 98% NCBI2R GetGeneInfo Batch 1 of 1 of max size 200 98% NCBI2R GetGeneInfo Batch 1 of 1 of max size 200 98% NCBI2R GetGeneInfo Batch 1 of 1 of max size 200 98% NCBI2R GetGeneInfo Batch 1 of 1 of max size 200 98% NCBI2R GetGeneInfo Batch 1 of 1 of max size 200 98% NCBI2R GetGeneInfo Batch 1 of 1 of max size 200 98% NCBI2R GetGeneInfo Batch 1 of 1 of max size 200 98% NCBI2R GetGeneInfo Batch 1 of 1 of max size 200 98% NCBI2R GetGeneInfo Batch 1 of 1 of max size 200 98% NCBI2R GetGeneInfo Batch 1 of 1 of max size 200 98% NCBI2R GetGeneInfo Batch 1 of 1 of max size 200 98% NCBI2R GetGeneInfo Batch 1 of 1 of max size 200 98% NCBI2R GetGeneInfo Batch 1 of 1 of max size 200 98% NCBI2R GetGeneInfo Batch 1 of 1 of max size 200 98% NCBI2R GetGeneInfo Batch 1 of 1 of max size 200 98% NCBI2R GetGeneInfo Batch 1 of 1 of max size 200 97% NCBI2R GetGeneInfo Batch 1 of 1 of max size 200 97% NCBI2R GetGeneInfo Batch 1 of 1 of max size 200 97% NCBI2R GetGeneInfo Batch 1 of 1 of max size 200 97% NCBI2R GetGeneInfo Batch 1 of 1 of max size 200 97% NCBI2R GetGeneInfo Batch 1 of 1 of max size 200 97% NCBI2R GetGeneInfo Batch 1 of 1 of max size 200 97% NCBI2R GetGeneInfo Batch 1 of 1 of max size 200 97% NCBI2R GetGeneInfo Batch 1 of 1 of max size 200 97% Error in if (genedf$chr[BatchItemNum + BatchOffset] == "") genedf$chr[BatchItemNum + : argument is of length zero Calls: GetGeneInfo Execution halted