* using log directory 'd:/Rcompile/CRANpkg/local/2.14/betareg.Rcheck' * using R version 2.14.2 (2012-02-29) * using platform: i386-pc-mingw32 (32-bit) * using session charset: ISO8859-1 * checking for file 'betareg/DESCRIPTION' ... OK * this is package 'betareg' version '3.0-0' * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking whether package 'betareg' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking for portable file names ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking for unstated dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of 'data' directory ... OK * checking data for non-ASCII characters ... OK * checking data for ASCII and uncompressed saves ... OK * checking sizes of PDF files under 'inst/doc' ... OK * checking examples ... OK * checking differences from 'betareg-Ex.Rout' to 'betareg-Ex.Rout.save' ... 139c139 < Number of iterations: 147 (BFGS) + 4 (Fisher scoring) --- > Number of iterations: 147 (BFGS) + 5 (Fisher scoring) 1006c1006 < statistic 2.268741e+01 8.5250962 5.569861 1.0567635 --- > statistic 2.268741e+01 8.5250961 5.569861 1.0567635 1085,1086c1085,1086 < statistic 8.5250962 5.569861 1.0567635 19.94405064 < p.value 0.9094631 0.998710 0.9999042 0.03531254 --- > statistic 8.5250961 5.569861 1.0567635 19.94405052 > p.value 0.9094631 0.998710 0.9999042 0.03531255 1122c1122 < Number of iterations: 17 (BFGS) + 2 (Fisher scoring) --- > Number of iterations: 17 (BFGS) + 1 (Fisher scoring) 1147c1147 < Number of iterations: 18 (BFGS) + 1 (Fisher scoring) --- > Number of iterations: 18 (BFGS) + 2 (Fisher scoring) OK * checking for unstated dependencies in tests ... OK * checking tests ... OK Running 'betamix.R' Comparing 'betamix.Rout' to 'betamix.Rout.save' ... OK Running 'betatree.R' Comparing 'betatree.Rout' to 'betatree.Rout.save' ...101c101 < statistic 2.268741e+01 8.5250962 5.569861 3.6273300 --- > statistic 2.268741e+01 8.5250961 5.569861 3.6273300 Running 'bias.R' Comparing 'bias.Rout' to 'bias.Rout.save' ... OK * checking for unstated dependencies in vignettes ... OK * checking package vignettes in 'inst/doc' ... OK * checking running R code from vignettes ... OK * checking re-building of vignette PDFs ... OK * checking PDF version of manual ... OK