* using log directory 'd:/Rcompile/CRANpkg/local/2.14/missForest.Rcheck' * using R version 2.14.2 (2012-02-29) * using platform: i386-pc-mingw32 (32-bit) * using session charset: ISO8859-1 * checking for file 'missForest/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'missForest' version '1.2' * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking whether package 'missForest' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking for portable file names ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking for unstated dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking sizes of PDF files under 'inst/doc' ... OK * checking examples ... OK * checking for unstated dependencies in tests ... OK * checking tests ... OK Running 'arguments.R' Comparing 'arguments.Rout' to 'arguments.Rout.save' ...22,23d21 < missForest iteration 9 in progress...done! < missForest iteration 10 in progress...done! 26c24 < 0.5181092 0.7203226 --- > 0.5547690 0.6946203 33c31 < 0.7179876 0.7321036 --- > 0.6595460 0.7449367 45c43 < 0.5452363 0.7199978 --- > 0.5703529 0.7161559 54,56d51 < missForest iteration 4 in progress...done! < missForest iteration 5 in progress...done! < missForest iteration 6 in progress...done! 59c54 < 0.5460635 0.6952171 --- > 0.5824575 0.6819537 66a62,65 > missForest iteration 5 in progress...done! > missForest iteration 6 in progress...done! > missForest iteration 7 in progress...done! > missForest iteration 8 in progress...done! 69c68 < 0.5783199 0.7202032 --- > 0.6568324 0.6843845 78,79d76 < missForest iteration 6 in progress...done! < missForest iteration 7 in progress...done! 82c79 < 0.5492768 0.6864535 --- > 0.5370801 0.7117783 85c82 < 0.6939767 0.7241379 --- > 0.6374000 0.7241379 Running 'continuous.R' Comparing 'continuous.Rout' to 'continuous.Rout.save' ... OK Running 'maxiterReached.R' Comparing 'maxiterReached.Rout' to 'maxiterReached.Rout.save' ... OK Running 'missingClass.R' Comparing 'missingClass.Rout' to 'missingClass.Rout.save' ...20,26d19 < missForest iteration 4 in progress...done! < missForest iteration 5 in progress...done! < missForest iteration 6 in progress...done! < missForest iteration 7 in progress...done! < missForest iteration 8 in progress...done! < missForest iteration 9 in progress...done! < missForest iteration 10 in progress...done! 29c22 < 1:25 Min. :-12.6438 Min. :-19.6249 --- > 1:26 Min. :-12.6438 Min. :-19.6249 31,32c24,25 < 3:41 Median : 0.1284 Median : -0.6307 < 4: 0 Mean : -0.4008 Mean : -0.6343 --- > 3:40 Median : 0.1284 Median : -0.6307 > 4: 0 Mean : -0.4004 Mean : -0.6311 Running 'mixed.R' Comparing 'mixed.Rout' to 'mixed.Rout.save' ...21,22d20 < missForest iteration 9 in progress...done! < missForest iteration 10 in progress...done! Running 'wrongInput.R' Comparing 'wrongInput.Rout' to 'wrongInput.Rout.save' ...21,22d20 < missForest iteration 9 in progress...done! < missForest iteration 10 in progress...done! * checking for unstated dependencies in vignettes ... OK * checking package vignettes in 'inst/doc' ... OK * checking running R code from vignettes ... OK * checking re-building of vignette PDFs ... OK * checking PDF version of manual ... OK