* using log directory 'd:/Rcompile/CRANpkg/local/2.15/Cprob.Rcheck' * using R version 2.15.0 (2012-03-30) * using platform: x86_64-pc-mingw32 (64-bit) * using session charset: ISO8859-1 * checking for file 'Cprob/DESCRIPTION' ... OK * this is package 'Cprob' version '1.2.1' * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking whether package 'Cprob' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking for portable file names ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * loading checks for arch 'i386' ** checking whether the package can be loaded ... OK ** checking whether the package can be loaded with stated dependencies ... OK ** checking whether the package can be unloaded cleanly ... OK ** checking whether the namespace can be loaded with stated dependencies ... OK ** checking whether the namespace can be unloaded cleanly ... OK * loading checks for arch 'x64' ** checking whether the package can be loaded ... OK ** checking whether the package can be loaded with stated dependencies ... OK ** checking whether the package can be unloaded cleanly ... OK ** checking whether the namespace can be loaded with stated dependencies ... OK ** checking whether the namespace can be unloaded cleanly ... OK * checking for unstated dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... NOTE cpf: warning in match.call(expand = FALSE): partial argument match of 'expand' to 'expand.dots' cpfpo: warning in match.call(expand = FALSE): partial argument match of 'expand' to 'expand.dots' cpfpo: warning in factor(event, order = TRUE): partial argument match of 'order' to 'ordered' pseudocpf: warning in match.call(expand = FALSE): partial argument match of 'expand' to 'expand.dots' pseudocpf: warning in factor(event, order = TRUE): partial argument match of 'order' to 'ordered' * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of 'data' directory ... OK * checking data for non-ASCII characters ... OK * checking data for ASCII and uncompressed saves ... OK * checking examples ... ** running examples for arch 'i386' ... OK ** running examples for arch 'x64' ... OK * checking for unstated dependencies in tests ... OK * checking tests ... ** running tests for arch 'i386' OK Running 'tests.Cprob.R' Comparing 'tests.Cprob.Rout' to 'tests.Cprob.Rout.save' ...153,155c153,155 < (Intercept) -3.17296435 0.04187927 1.33248215 1.7169565 0.085987112 < age 0.04224328 1.04314823 0.01965401 3.2785824 0.001043299 < creat 0.19314357 1.21305693 0.75242697 0.2427789 0.808176695 --- > (Intercept) -3.17296435 0.04187927 1.33248215 0.2465093 0.8052880 > age 0.04224328 1.04314823 0.01965401 -0.6819222 0.4952882 > creat 0.19314357 1.21305693 0.75242697 0.1301027 0.8964852 183,184c183,184 < age 0.03787388 1.0386002 0.01759928 2.1520132 0.03139632 < creat -0.11270506 0.8934141 0.15908985 -0.7084365 0.47867423 --- > age 0.03787388 1.0386002 0.01757588 2.1548779 0.03117139 > creat -0.11270506 0.8934141 0.15786668 -0.7139256 0.47527320 185a186,187 > Warning message: > In sqrt(diag(x$fit$vbeta)) : NaNs produced 195a198,199 > Warning message: > In sqrt(diag(x$fit$vbeta)) : NaNs produced 203,204c207,208 < age 0.03787 1.03860 0.01760 2.152 0.0314 * < creat -0.11271 0.89341 0.15909 -0.708 0.4787 --- > age 0.03787 1.03860 0.01758 2.155 0.0312 * > creat -0.11271 0.89341 0.15787 -0.714 0.4753 210c214 < creat 0.8934 1.1193 0.6541 1.220 --- > creat 0.8934 1.1193 0.6557 1.217 211a216,217 > Warning message: > In sqrt(diag(object$fit$vbeta)) : NaNs produced 226c232 < creat 0.8934 1.1193 0.6541 1.220 --- > creat 0.8934 1.1193 0.6557 1.217 227a234,235 > Warning message: > In sqrt(diag(object$fit$vbeta)) : NaNs produced 314a323,325 > Warning messages: > 1: In sqrt(diag(object$fit$vbeta)) : NaNs produced > 2: In sqrt(diag(object$fit$vbeta)) : NaNs produced ** running tests for arch 'x64' OK Running 'tests.Cprob.R' Comparing 'tests.Cprob.Rout' to 'tests.Cprob.Rout.save' ...153,155c153,155 < (Intercept) -3.17296435 0.04187927 1.33248215 1.1231049 0.2613930 < age 0.04224328 1.04314823 0.01965401 -1.0279659 0.3039659 < creat 0.19314357 1.21305693 0.75242697 0.4010676 0.6883703 --- > (Intercept) -3.17296435 0.04187927 1.33248215 0.2465093 0.8052880 > age 0.04224328 1.04314823 0.01965401 -0.6819222 0.4952882 > creat 0.19314357 1.21305693 0.75242697 0.1301027 0.8964852 183,184c183,184 < age 0.03787388 1.0386002 0.01759928 2.1520132 0.03139632 < creat -0.11270506 0.8934141 0.15908985 -0.7084365 0.47867423 --- > age 0.03787388 1.0386002 0.01757588 2.1548779 0.03117139 > creat -0.11270506 0.8934141 0.15786668 -0.7139256 0.47527320 207,208c207,208 < age 0.03787 1.03860 0.01760 2.152 0.0314 * < creat -0.11271 0.89341 0.15909 -0.708 0.4787 --- > age 0.03787 1.03860 0.01758 2.155 0.0312 * > creat -0.11271 0.89341 0.15787 -0.714 0.4753 214c214 < creat 0.8934 1.1193 0.6541 1.220 --- > creat 0.8934 1.1193 0.6557 1.217 232c232 < creat 0.8934 1.1193 0.6541 1.220 --- > creat 0.8934 1.1193 0.6557 1.217 * checking PDF version of manual ... OK NOTE: There was 1 note. See 'd:/Rcompile/CRANpkg/local/2.15/Cprob.Rcheck/00check.log' for details.