* using log directory 'd:/Rcompile/CRANpkg/local/2.15/SRPM.Rcheck' * using R version 2.15.0 (2012-03-30) * using platform: x86_64-pc-mingw32 (64-bit) * using session charset: ISO8859-1 * checking for file 'SRPM/DESCRIPTION' ... OK * this is package 'SRPM' version '0.1-6' * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking whether package 'SRPM' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking for portable file names ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * loading checks for arch 'i386' ** checking whether the package can be loaded ... OK ** checking whether the package can be loaded with stated dependencies ... OK ** checking whether the package can be unloaded cleanly ... OK ** checking whether the namespace can be loaded with stated dependencies ... OK ** checking whether the namespace can be unloaded cleanly ... OK * loading checks for arch 'x64' ** checking whether the package can be loaded ... OK ** checking whether the package can be loaded with stated dependencies ... OK ** checking whether the package can be unloaded cleanly ... OK ** checking whether the namespace can be loaded with stated dependencies ... OK ** checking whether the namespace can be unloaded cleanly ... OK * checking for unstated dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... NOTE File 'SRPM/R/zzz.R': .onLoad calls: require(pkg, quietly = TRUE, character.only = TRUE) Package startup functions should not change the search path. See section 'Good practice' in ?.onAttach. * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking sizes of PDF files under 'inst/doc' ... OK * checking installed files from 'inst/doc' ... NOTE The following files are already in R: 'jss.bst' Please remove them from your package. The following files should probably not be installed: 'SRPM.tex' Consider the use of a .Rinstignore file: see 'Writing R Extensions', or move the vignette sources from 'inst/doc' to 'vignettes'. * checking examples ... ** running examples for arch 'i386' ... OK ** running examples for arch 'x64' ... OK * checking for unstated dependencies in tests ... OK * checking tests ... ** running tests for arch 'i386' OK Running 'reg-tests.R' Comparing 'reg-tests.Rout' to 'reg-tests.Rout.save' ...9c9 < [1] "d:/temp/RtmpKerIwX/RLIBS_145047ac5b3f/SRPM/SRP-ex/srp_simple" --- > [1] "/Users/rdpeng/projects/R-packages/SRPM.Rcheck/SRPM/SRP-ex/srp_simple" 24c24 < .. .. ..@ dir : chr "d:/temp/RtmpKerIwX/RLIBS_145047ac5b3f/SRPM/SRP-ex/srp_simple/cacheDB/FitLinearModel" --- > .. .. ..@ dir : chr "/Users/rdpeng/projects/R-packages/SRPM.Rcheck/SRPM/SRP-ex/srp_simple/cacheDB/FitLinearModel" 40,41c40,55 < ERROR: unable to run code chunk 3 < there is no package called 'xtable' --- > % latex table generated in R 2.12.0 by xtable 1.5-6 package > % Mon Apr 12 11:22:33 2010 > \begin{table}[ht] > \begin{center} > \begin{tabular}{rrrrr} > \hline > & Estimate & Std. Error & t value & Pr($>$$|$t$|$) \\ > \hline > (Intercept) & -64.3421 & 23.0547 & -2.79 & 0.0062 \\ > Temp & 1.6521 & 0.2535 & 6.52 & 0.0000 \\ > Wind & -3.3336 & 0.6544 & -5.09 & 0.0000 \\ > Solar.R & 0.0598 & 0.0232 & 2.58 & 0.0112 \\ > \hline > \end{tabular} > \end{center} > \end{table} 48,49c62,77 < ERROR: unable to run code chunk 3 < there is no package called 'xtable' --- > % latex table generated in R 2.12.0 by xtable 1.5-6 package > % Mon Apr 12 11:22:33 2010 > \begin{table}[ht] > \begin{center} > \begin{tabular}{rrrrr} > \hline > & Estimate & Std. Error & t value & Pr($>$$|$t$|$) \\ > \hline > (Intercept) & -64.3421 & 23.0547 & -2.79 & 0.0062 \\ > Temp & 1.6521 & 0.2535 & 6.52 & 0.0000 \\ > Wind & -3.3336 & 0.6544 & -5.09 & 0.0000 \\ > Solar.R & 0.0598 & 0.0232 & 2.58 & 0.0112 \\ > \hline > \end{tabular} > \end{center} > \end{table} 87,88c115,130 < ERROR: unable to run code chunk 3 < there is no package called 'xtable' --- > % latex table generated in R 2.12.0 by xtable 1.5-6 package > % Mon Apr 12 11:22:33 2010 > \begin{table}[ht] > \begin{center} > \begin{tabular}{rrrrr} > \hline > & Estimate & Std. Error & t value & Pr($>$$|$t$|$) \\ > \hline > (Intercept) & -64.3421 & 23.0547 & -2.79 & 0.0062 \\ > Temp & 1.6521 & 0.2535 & 6.52 & 0.0000 \\ > Wind & -3.3336 & 0.6544 & -5.09 & 0.0000 \\ > Solar.R & 0.0598 & 0.0232 & 2.58 & 0.0112 \\ > \hline > \end{tabular} > \end{center} > \end{table} ** running tests for arch 'x64' OK Running 'reg-tests.R' Comparing 'reg-tests.Rout' to 'reg-tests.Rout.save' ...9c9 < [1] "d:/temp/RtmpKerIwX/RLIBS_145047ac5b3f/SRPM/SRP-ex/srp_simple" --- > [1] "/Users/rdpeng/projects/R-packages/SRPM.Rcheck/SRPM/SRP-ex/srp_simple" 24c24 < .. .. ..@ dir : chr "d:/temp/RtmpKerIwX/RLIBS_145047ac5b3f/SRPM/SRP-ex/srp_simple/cacheDB/FitLinearModel" --- > .. .. ..@ dir : chr "/Users/rdpeng/projects/R-packages/SRPM.Rcheck/SRPM/SRP-ex/srp_simple/cacheDB/FitLinearModel" 40,41c40,55 < ERROR: unable to run code chunk 3 < there is no package called 'xtable' --- > % latex table generated in R 2.12.0 by xtable 1.5-6 package > % Mon Apr 12 11:22:33 2010 > \begin{table}[ht] > \begin{center} > \begin{tabular}{rrrrr} > \hline > & Estimate & Std. Error & t value & Pr($>$$|$t$|$) \\ > \hline > (Intercept) & -64.3421 & 23.0547 & -2.79 & 0.0062 \\ > Temp & 1.6521 & 0.2535 & 6.52 & 0.0000 \\ > Wind & -3.3336 & 0.6544 & -5.09 & 0.0000 \\ > Solar.R & 0.0598 & 0.0232 & 2.58 & 0.0112 \\ > \hline > \end{tabular} > \end{center} > \end{table} 48,49c62,77 < ERROR: unable to run code chunk 3 < there is no package called 'xtable' --- > % latex table generated in R 2.12.0 by xtable 1.5-6 package > % Mon Apr 12 11:22:33 2010 > \begin{table}[ht] > \begin{center} > \begin{tabular}{rrrrr} > \hline > & Estimate & Std. Error & t value & Pr($>$$|$t$|$) \\ > \hline > (Intercept) & -64.3421 & 23.0547 & -2.79 & 0.0062 \\ > Temp & 1.6521 & 0.2535 & 6.52 & 0.0000 \\ > Wind & -3.3336 & 0.6544 & -5.09 & 0.0000 \\ > Solar.R & 0.0598 & 0.0232 & 2.58 & 0.0112 \\ > \hline > \end{tabular} > \end{center} > \end{table} 87,88c115,130 < ERROR: unable to run code chunk 3 < there is no package called 'xtable' --- > % latex table generated in R 2.12.0 by xtable 1.5-6 package > % Mon Apr 12 11:22:33 2010 > \begin{table}[ht] > \begin{center} > \begin{tabular}{rrrrr} > \hline > & Estimate & Std. Error & t value & Pr($>$$|$t$|$) \\ > \hline > (Intercept) & -64.3421 & 23.0547 & -2.79 & 0.0062 \\ > Temp & 1.6521 & 0.2535 & 6.52 & 0.0000 \\ > Wind & -3.3336 & 0.6544 & -5.09 & 0.0000 \\ > Solar.R & 0.0598 & 0.0232 & 2.58 & 0.0112 \\ > \hline > \end{tabular} > \end{center} > \end{table} * checking for unstated dependencies in vignettes ... OK * checking package vignettes in 'inst/doc' ... OK * checking running R code from vignettes ... OK * checking re-building of vignette PDFs ... OK * checking PDF version of manual ... OK NOTE: There were 2 notes. See 'd:/Rcompile/CRANpkg/local/2.15/SRPM.Rcheck/00check.log' for details.