* using log directory 'd:/Rcompile/CRANpkg/local/2.15/pendensity.Rcheck' * using R version 2.15.0 (2012-03-30) * using platform: x86_64-pc-mingw32 (64-bit) * using session charset: ISO8859-1 * checking for file 'pendensity/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'pendensity' version '0.2.3' * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking whether package 'pendensity' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking for portable file names ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * loading checks for arch 'i386' ** checking whether the package can be loaded ... OK ** checking whether the package can be loaded with stated dependencies ... OK ** checking whether the package can be unloaded cleanly ... OK ** checking whether the namespace can be loaded with stated dependencies ... OK ** checking whether the namespace can be unloaded cleanly ... OK * loading checks for arch 'x64' ** checking whether the package can be loaded ... OK ** checking whether the package can be loaded with stated dependencies ... OK ** checking whether the package can be unloaded cleanly ... OK ** checking whether the namespace can be loaded with stated dependencies ... OK ** checking whether the namespace can be unloaded cleanly ... OK * checking for unstated dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... NOTE cal.int: warning in get(paste("coef", i, ".", j, sep = ""), env = help.env): partial argument match of 'env' to 'envir' cal.int: warning in assign(paste("INT", i, ".", j, sep = ""), INT, env = help.env): partial argument match of 'env' to 'envir' distr.func: warning in assign("allx", len.x.fac, env = func.env): partial argument match of 'env' to 'envir' distr.func: warning in assign("weight1", weight, env = func.env): partial argument match of 'env' to 'envir' distr.func: warning in assign(name, weight[i, ], env = func.env): partial argument match of 'env' to 'envir' distr.func: warning in assign("combi", obj$combi, env = func.env): partial argument match of 'env' to 'envir' distr.func: warning in get(paste("weight", k, sep = ""), env = func.env): partial argument match of 'env' to 'envir' distr.func: warning in get(paste("weight", i, sep = ""), env = func.env): partial argument match of 'env' to 'envir' distr.func: warning in assign(paste("distr.func", i, ".", j, sep = ""), paste("obj <-function(x){", term, "}"), env = func.env): partial argument match of 'env' to 'envir' distr.func.help: warning in assign(paste("y.help", i, sep = ""), help.seq, env = help.env): partial argument match of 'env' to 'envir' distr.func.help: warning in get(paste("y.help", (i + j - 1), sep = ""), env = help.env): partial argument match of 'env' to 'envir' distr.func.help: warning in assign(paste("y.base.help", i, ".", j, sep = ""), base.val, env = help.env): partial argument match of 'env' to 'envir' distr.func.help: warning in assign(paste("y.list.help", i, ".", j, sep = ""), list, env = help.env): partial argument match of 'env' to 'envir' distr.func.help: warning in assign(paste("y.vec", i, ".", j, sep = ""), y.vec, env = help.env): partial argument match of 'env' to 'envir' distr.func.help: warning in assign(paste("coef", i, ".", j, sep = ""), (solve(outer(y.vec, 0:q, "^")) %*% (get(paste("y.base.help", i, ".", j, sep = ""), env = help.env))), env = help.env): partial argument match of 'env' to 'envir' distr.func.help: warning in get(paste("y.base.help", i, ".", j, sep = ""), env = help.env): partial argument match of 'env' to 'envir' pendenForm: warning in eval(parse(text = term), env = penden.env): partial argument match of 'env' to 'envir' plot.pendensity: warning in assign(paste("base1"), help.base.den, env = help.env): partial argument match of 'env' to 'envir' plot.pendensity: warning in assign("y.help1", y.help, env = help.env): partial argument match of 'env' to 'envir' plot.pendensity: warning in assign(paste("y.help1", sep = ""), y.help, env = help.env): partial argument match of 'env' to 'envir' plot.pendensity: warning in assign("weight1", weight, env = help.env): partial argument match of 'env' to 'envir' plot.pendensity: warning in assign("y.later1", y, env = help.env): partial argument match of 'env' to 'envir' plot.pendensity: warning in assign("len.x.fac1", 1, env = help.env): partial argument match of 'env' to 'envir' plot.pendensity: warning in get("weight1", env = help.env): partial argument match of 'env' to 'envir' plot.pendensity: warning in get("base1", env = help.env): partial argument match of 'env' to 'envir' plot.pendensity: warning in get("base1.y.val", env = help.env): partial argument match of 'env' to 'envir' plot.pendensity: warning in assign("b.w1", bw[-ind], env = help.env): partial argument match of 'env' to 'envir' plot.pendensity: warning in assign("kern.den1", density(get("y.later1", env = help.env), kernel = "gaussian", bw = "ucv"), env = help.env): partial argument match of 'env' to 'envir' plot.pendensity: warning in get("y.later1", env = help.env): partial argument match of 'env' to 'envir' plot.pendensity: warning in get("kern.den1", env = help.env): partial argument match of 'env' to 'envir' plot.pendensity: warning in assign(name, obj2, env = help.env): partial argument match of 'env' to 'envir' plot.pendensity: warning in assign(paste("y.later", j, sep = ""), y, env = help.env): partial argument match of 'env' to 'envir' plot.pendensity: warning in assign(paste("y.help", j, sep = ""), y.help, env = help.env): partial argument match of 'env' to 'envir' plot.pendensity: warning in assign(paste("base", j, sep = ""), help.base.den, env = help.env): partial argument match of 'env' to 'envir' plot.pendensity: warning in assign(paste("base.y.val", j, sep = ""), help.base.y.val, env = help.env): partial argument match of 'env' to 'envir' plot.pendensity: warning in get(paste("weight", j, sep = ""), env = help.env): partial argument match of 'env' to 'envir' plot.pendensity: warning in get(paste("base", j, sep = ""), env = help.env): partial argument match of 'env' to 'envir' plot.pendensity: warning in get(paste("base.y.val", j, sep = ""), env = help.env): partial argument match of 'env' to 'envir' plot.pendensity: warning in assign(paste("b.w.y.val", j, sep = ""), den.val[[j]], env = help.env): partial argument match of 'env' to 'envir' plot.pendensity: warning in assign(paste("b.w", j, sep = ""), bw, env = help.env): partial argument match of 'env' to 'envir' plot.pendensity: warning in get(paste("b.w", j, sep = ""), env = help.env): partial argument match of 'env' to 'envir' plot.pendensity: warning in assign(paste("kern.den", j, sep = ""), density(get(paste("y.later", j, sep = ""), env = help.env), kernel = "epanechnikov"), env = help.env): partial argument match of 'env' to 'envir' plot.pendensity: warning in get(paste("y.later", j, sep = ""), env = help.env): partial argument match of 'env' to 'envir' plot.pendensity: warning in get(paste("kern.den", j, sep = ""), env = help.env): partial argument match of 'env' to 'envir' plot.pendensity: warning in get(paste("y.help1", sep = ""), env = help.env): partial argument match of 'env' to 'envir' plot.pendensity: warning in get(paste("b.w1", sep = ""), env = help.env): partial argument match of 'env' to 'envir' plot.pendensity: warning in get(paste("kern.den1", sep = ""), env = help.env): partial argument match of 'env' to 'envir' plot.pendensity: warning in get(paste("base", i, sep = ""), env = help.env): partial argument match of 'env' to 'envir' plot.pendensity: warning in get(paste("weight", i, sep = ""), env = help.env): partial argument match of 'env' to 'envir' plot.pendensity: warning in get(paste("y.help", i, sep = ""), env = help.env): partial argument match of 'env' to 'envir' plot.pendensity: warning in get(paste("kern.den", i, sep = ""), env = help.env): partial argument match of 'env' to 'envir' plot.pendensity: warning in get(paste("b.w", i, sep = ""), env = help.env): partial argument match of 'env' to 'envir' plot.pendensity: warning in assign(name, weight[i, ], env = help.env): partial argument match of 'env' to 'envir' plot.pendensity: warning in assign(paste("y.list", j, sep = ""), set, env = help.env): partial argument match of 'env' to 'envir' plot.pendensity: warning in get(paste("y.list", j, sep = ""), env = help.env): partial argument match of 'env' to 'envir' plot.pendensity: warning in assign(paste("distr", j, sep = ""), sum, env = help.env): partial argument match of 'env' to 'envir' plot.pendensity: warning in get("x.factor", env = func): partial argument match of 'env' to 'envir' plot.pendensity: warning in get("allx", env = func): partial argument match of 'env' to 'envir' plot.pendensity: warning in get(paste("distr.func", i, ".", j, sep = ""), env = func): partial argument match of 'env' to 'envir' plot.pendensity: warning in assign(paste("x", i, sep = ""), w, env = func): partial argument match of 'env' to 'envir' plot.pendensity: warning in assign(paste("F(x)", i, sep = ""), tt, env = func): partial argument match of 'env' to 'envir' poly.part: warning in get(paste("INT", i, ".", j, sep = ""), env = help.env): partial argument match of 'env' to 'envir' poly.part: warning in get(paste("coef", i, ".", j, sep = ""), env = help.env): partial argument match of 'env' to 'envir' variance.val: warning in get(name3, env = base.den): partial argument match of 'env' to 'envir' variance.val: warning in get(name2, env = base.den): partial argument match of 'env' to 'envir' * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of 'data' directory ... OK * checking data for non-ASCII characters ... OK * checking data for ASCII and uncompressed saves ... OK * checking sizes of PDF files under 'inst/doc' ... NOTE 'qpdf' made some significant size reductions: compacted 'pendensity.pdf' from 297Kb to 162Kb consider running tools::compactPDF() on these files * checking installed files from 'inst/doc' ... OK * checking examples ... ** running examples for arch 'i386' ... OK ** running examples for arch 'x64' ... OK * checking for unstated dependencies in vignettes ... OK * checking package vignettes in 'inst/doc' ... OK * checking running R code from vignettes ... OK * checking re-building of vignette PDFs ... OK * checking PDF version of manual ... OK NOTE: There were 2 notes. See 'd:/Rcompile/CRANpkg/local/2.15/pendensity.Rcheck/00check.log' for details.