CRAN Package Check Results for Package AFLPsim

Last updated on 2015-07-03 11:46:54.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.3-4 1.85 31.58 33.43 NOTE
r-devel-linux-x86_64-debian-gcc 0.3-4 1.78 31.18 32.96 NOTE
r-devel-linux-x86_64-fedora-clang 0.3-4 67.08 NOTE
r-devel-linux-x86_64-fedora-gcc 0.3-4 62.48 NOTE
r-devel-osx-x86_64-clang 0.3-4 61.52 NOTE
r-devel-windows-ix86+x86_64 0.3-4 10.00 57.00 67.00 NOTE
r-patched-linux-x86_64 0.3-4 1.81 30.75 32.56 NOTE
r-patched-solaris-sparc 0.3-4 445.40 NOTE
r-patched-solaris-x86 0.3-4 98.80 NOTE
r-release-linux-x86_64 0.3-4 1.94 30.63 32.57 NOTE
r-release-osx-x86_64-mavericks 0.3-4 OK
r-release-windows-ix86+x86_64 0.3-4 9.00 60.00 69.00 OK
r-oldrel-windows-ix86+x86_64 0.3-4 22.00 98.00 120.00 OK

Check Details

Version: 0.3-4
Check: S3 generic/method consistency
Result: NOTE
    Found the following apparent S3 methods exported but not registered:
     plot.demosimhybrid plot.hybridsim
    See section ‘Registering S3 methods’ in the ‘Writing R Extensions’
    manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-x86_64

Version: 0.3-4
Check: R code for possible problems
Result: NOTE
    bayescan: no visible global function definition for ‘read.table’
    demosimhybrid: no visible global function definition for
     ‘capture.output’
    gscan : p.L: no visible global function definition for ‘qbeta’
    gscan : p.U: no visible global function definition for ‘qbeta’
    gscan : zbinomial: no visible global function definition for
     ‘binom.test’
    gscan: no visible global function definition for ‘p.adjust’
    gscan: no visible global function definition for ‘binom.test’
    hybridize: no visible global function definition for ‘rbinom’
    hybridsim: no visible global function definition for ‘rbeta’
    hybridsim: no visible global function definition for ‘rbinom’
    plot.demosimhybrid: no visible global function definition for ‘layout’
    plot.demosimhybrid: no visible global function definition for ‘par’
    plot.demosimhybrid: no visible global function definition for ‘legend’
    plot.demosimhybrid: no visible global function definition for ‘barplot’
    plot.hybridsim: no visible global function definition for ‘persp’
    plot.hybridsim: no visible global function definition for ‘points’
    plot.hybridsim: no visible global function definition for ‘trans3d’
    plot.hybridsim: no visible global function definition for ‘segments’
    Undefined global functions or variables:
     barplot binom.test capture.output layout legend p.adjust par persp
     points qbeta rbeta rbinom read.table segments trans3d
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Version: 0.3-4
Check: R code for possible problems
Result: NOTE
    bayescan: no visible global function definition for 'shortPathName'
    bayescan: no visible global function definition for 'read.table'
    demosimhybrid: no visible global function definition for
     'capture.output'
    gscan : p.L: no visible global function definition for 'qbeta'
    gscan : p.U: no visible global function definition for 'qbeta'
    gscan : zbinomial: no visible global function definition for
     'binom.test'
    gscan: no visible global function definition for 'p.adjust'
    gscan: no visible global function definition for 'binom.test'
    hybridize: no visible global function definition for 'rbinom'
    hybridsim: no visible global function definition for 'rbeta'
    hybridsim: no visible global function definition for 'rbinom'
    plot.demosimhybrid: no visible global function definition for 'layout'
    plot.demosimhybrid: no visible global function definition for 'par'
    plot.demosimhybrid: no visible global function definition for 'legend'
    plot.demosimhybrid: no visible global function definition for 'barplot'
    plot.hybridsim: no visible global function definition for 'persp'
    plot.hybridsim: no visible global function definition for 'points'
    plot.hybridsim: no visible global function definition for 'trans3d'
    plot.hybridsim: no visible global function definition for 'segments'
    Undefined global functions or variables:
     barplot binom.test capture.output layout legend p.adjust par persp
     points qbeta rbeta rbinom read.table segments shortPathName trans3d
Flavor: r-devel-windows-ix86+x86_64