CRAN Package Check Results for Package AquaEnv

Last updated on 2015-07-07 11:47:59.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.0-3 0.90 20.91 21.81 NOTE
r-devel-linux-x86_64-debian-gcc 1.0-3 0.95 22.24 23.19 NOTE
r-devel-linux-x86_64-fedora-clang 1.0-3 42.47 NOTE
r-devel-linux-x86_64-fedora-gcc 1.0-3 40.16 NOTE
r-devel-osx-x86_64-clang 1.0-3 30.85 NOTE
r-devel-windows-ix86+x86_64 1.0-3 4.00 29.00 33.00 NOTE
r-patched-linux-x86_64 1.0-3 1.02 22.73 23.75 NOTE
r-patched-solaris-sparc 1.0-3 232.30 NOTE
r-patched-solaris-x86 1.0-3 46.00 NOTE
r-release-linux-x86_64 1.0-3 0.90 22.35 23.26 NOTE
r-release-osx-x86_64-mavericks 1.0-3 NOTE
r-release-windows-ix86+x86_64 1.0-3 4.00 31.00 35.00 NOTE
r-oldrel-windows-ix86+x86_64 1.0-3 6.00 39.00 45.00 NOTE

Check Details

Version: 1.0-3
Check: DESCRIPTION meta-information
Result: NOTE
    Malformed Description field: should contain one or more complete sentences.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-windows-ix86+x86_64

Version: 1.0-3
Check: dependencies in R code
Result: NOTE
    Packages in Depends field not imported from:
     ‘deSolve’ ‘minpack.lm’
     These packages need to be imported from (in the NAMESPACE file)
     for when this namespace is loaded but not attached.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 1.0-3
Check: S3 generic/method consistency
Result: NOTE
    Found the following apparent S3 methods exported but not registered:
     as.data.frame.aquaenv c.aquaenv length.aquaenv merge.aquaenv
     plot.aquaenv
    See section ‘Registering S3 methods’ in the ‘Writing R Extensions’
    manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-x86_64

Version: 1.0-3
Check: R code for possible problems
Result: NOTE
    Found an obsolete/platform-specific call in the following function:
     ‘opendevice’
    Found the platform-specific device:
     ‘x11’
    dev.new() is the preferred way to open a new device, in the unlikely
    event one is needed.
    TAfit: no visible global function definition for ‘nls.lm.control’
    TAfit : residuals: no visible global function definition for
     ‘approxfun’
    TAfit : residuals: no visible global function definition for ‘plot’
    TAfit : residuals: no visible global function definition for ‘par’
    TAfit: no visible global function definition for ‘nls.lm’
    basicplot: no visible global function definition for ‘par’
    basicplot: no visible global function definition for ‘plot’
    bjerrumplot: no visible global function definition for ‘par’
    bjerrumplot: no visible global function definition for ‘plot’
    bjerrumplot: no visible global function definition for ‘legend’
    cumulativeplot: no visible global function definition for ‘par’
    cumulativeplot: no visible global function definition for ‘plot’
    cumulativeplot: no visible global function definition for ‘polygon’
    cumulativeplot: no visible global function definition for ‘legend’
    gauge_p: no visible global function definition for ‘uniroot’
    opendevice: no visible global function definition for ‘x11’
    opendevice: no visible global function definition for ‘postscript’
    opendevice: no visible global function definition for ‘pdf’
    plot.aquaenv: no visible global function definition for ‘dev.off’
    splitS_K_CO2: no visible global function definition for ‘uniroot’
    splitS_K_HCO3: no visible global function definition for ‘uniroot’
    Undefined global functions or variables:
     approxfun dev.off legend nls.lm nls.lm.control par pdf plot polygon
     postscript uniroot x11
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Version: 1.0-3
Check: Rd line widths
Result: NOTE
    Rd file 'aquaenv.Rd':
     \usage lines wider than 90 characters:
     k_hf=NULL, k1k2="roy", khf="dickson", khso4="dickson", fCO2atm=0.000390, fO2atm=0.20946)
    
    These lines will be truncated in the PDF manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-release-linux-x86_64

Version: 1.0-3
Check: R code for possible problems
Result: NOTE
    Found an obsolete/platform-specific call in the following function:
     ‘opendevice’
    Found the platform-specific device:
     ‘x11’
    dev.new() is the preferred way to open a new device, in the unlikely
    event one is needed.
    TAfit: no visible global function definition for ‘nls.lm.control’
    TAfit: no visible global function definition for ‘nls.lm’
    Undefined global functions or variables:
     nls.lm nls.lm.control
Flavor: r-devel-osx-x86_64-clang

Version: 1.0-3
Check: R code for possible problems
Result: NOTE
    TAfit: no visible global function definition for 'nls.lm.control'
    TAfit : residuals: no visible global function definition for
     'approxfun'
    TAfit : residuals: no visible global function definition for 'plot'
    TAfit : residuals: no visible global function definition for 'par'
    TAfit: no visible global function definition for 'nls.lm'
    basicplot: no visible global function definition for 'par'
    basicplot: no visible global function definition for 'plot'
    bjerrumplot: no visible global function definition for 'par'
    bjerrumplot: no visible global function definition for 'plot'
    bjerrumplot: no visible global function definition for 'legend'
    cumulativeplot: no visible global function definition for 'par'
    cumulativeplot: no visible global function definition for 'plot'
    cumulativeplot: no visible global function definition for 'polygon'
    cumulativeplot: no visible global function definition for 'legend'
    gauge_p: no visible global function definition for 'uniroot'
    opendevice: no visible global function definition for 'x11'
    opendevice: no visible global function definition for 'postscript'
    opendevice: no visible global function definition for 'pdf'
    plot.aquaenv: no visible global function definition for 'dev.off'
    splitS_K_CO2: no visible global function definition for 'uniroot'
    splitS_K_HCO3: no visible global function definition for 'uniroot'
    Undefined global functions or variables:
     approxfun dev.off legend nls.lm nls.lm.control par pdf plot polygon
     postscript uniroot x11
Flavor: r-devel-windows-ix86+x86_64

Version: 1.0-3
Check: R code for possible problems
Result: NOTE
    Found an obsolete/platform-specific call in the following function:
     ‘opendevice’
    Found the platform-specific device:
     ‘x11’
    dev.new() is the preferred way to open a new device, in the unlikely
    event one is needed.
    TAfit: no visible global function definition for ‘nls.lm.control’
    TAfit: no visible global function definition for ‘nls.lm’
Flavors: r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-x86_64

Version: 1.0-3
Check: R code for possible problems
Result: NOTE
    TAfit: no visible global function definition for ‘nls.lm.control’
    TAfit: no visible global function definition for ‘nls.lm’
Flavors: r-release-osx-x86_64-mavericks, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64