CRAN Package Check Results for Package BTSPAS

Last updated on 2015-09-03 23:47:24.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 2014.0901 1.46 30.60 32.06 NOTE
r-devel-linux-x86_64-debian-gcc 2014.0901 1.38 30.50 31.88 NOTE
r-devel-linux-x86_64-fedora-clang 2014.0901 NOTE
r-devel-linux-x86_64-fedora-gcc 2014.0901 NOTE
r-devel-osx-x86_64-clang 2014.0901 54.96 NOTE
r-devel-windows-ix86+x86_64 2014.0901 5.00 51.00 56.00 NOTE
r-patched-linux-x86_64 2014.0901 1.64 31.74 33.38 OK
r-patched-solaris-sparc 2014.0901 410.10 NOTE
r-patched-solaris-x86 2014.0901 85.30 NOTE
r-release-linux-x86_64 2014.0901 1.52 30.75 32.27 OK
r-release-osx-x86_64-mavericks 2014.0901 NOTE
r-release-windows-ix86+x86_64 2014.0901 9.00 51.00 60.00 OK
r-oldrel-windows-ix86+x86_64 2014.0901 16.00 79.00 95.00 OK

Check Details

Version: 2014.0901
Check: R code for possible problems
Result: NOTE
    PredictivePosterior.TSPDE: no visible global function definition for
     ‘rbinom’
    PredictivePosterior.TSPDE: no visible global function definition for
     ‘dbinom’
    PredictivePosterior.TSPDE.WHCH: no visible global function definition
     for ‘rbinom’
    PredictivePosterior.TSPDE.WHCH2: no visible global function definition
     for ‘rbinom’
    PredictivePosterior.TSPDE.WHSteel: no visible global function
     definition for ‘rbinom’
    PredictivePosterior.TSPNDE : <anonymous> : <anonymous>: no visible
     global function definition for ‘dmultinom’
    PredictivePosterior.TSPNDE : <anonymous>: no visible global function
     definition for ‘dbinom’
    PredictivePosterior.TSPNDENP : <anonymous> : <anonymous>: no visible
     global function definition for ‘dmultinom’
    PredictivePosterior.TSPNDENP : <anonymous>: no visible global function
     definition for ‘dbinom’
    PredictivePosteriorPlot.TSPDE: no visible global function definition
     for ‘split.screen’
    PredictivePosteriorPlot.TSPDE: no visible global function definition
     for ‘screen’
    PredictivePosteriorPlot.TSPDE: no visible global function definition
     for ‘par’
    PredictivePosteriorPlot.TSPDE: no visible global function definition
     for ‘plot’
    PredictivePosteriorPlot.TSPDE: no visible global function definition
     for ‘abline’
    PredictivePosteriorPlot.TSPDE: no visible global function definition
     for ‘text’
    PredictivePosteriorPlot.TSPDE: no visible global function definition
     for ‘close.screen’
    PredictivePosteriorPlot.TSPDE.WHCH: no visible global function
     definition for ‘split.screen’
    PredictivePosteriorPlot.TSPDE.WHCH: no visible global function
     definition for ‘screen’
    PredictivePosteriorPlot.TSPDE.WHCH: no visible global function
     definition for ‘par’
    PredictivePosteriorPlot.TSPDE.WHCH: no visible global function
     definition for ‘plot’
    PredictivePosteriorPlot.TSPDE.WHCH: no visible global function
     definition for ‘abline’
    PredictivePosteriorPlot.TSPDE.WHCH: no visible global function
     definition for ‘text’
    PredictivePosteriorPlot.TSPDE.WHCH: no visible global function
     definition for ‘close.screen’
    PredictivePosteriorPlot.TSPDE.WHCH2: no visible global function
     definition for ‘split.screen’
    PredictivePosteriorPlot.TSPDE.WHCH2: no visible global function
     definition for ‘screen’
    PredictivePosteriorPlot.TSPDE.WHCH2: no visible global function
     definition for ‘par’
    PredictivePosteriorPlot.TSPDE.WHCH2: no visible global function
     definition for ‘plot’
    PredictivePosteriorPlot.TSPDE.WHCH2: no visible global function
     definition for ‘abline’
    PredictivePosteriorPlot.TSPDE.WHCH2: no visible global function
     definition for ‘text’
    PredictivePosteriorPlot.TSPDE.WHCH2: no visible global function
     definition for ‘close.screen’
    PredictivePosteriorPlot.TSPDE.WHSteel: no visible global function
     definition for ‘split.screen’
    PredictivePosteriorPlot.TSPDE.WHSteel: no visible global function
     definition for ‘screen’
    PredictivePosteriorPlot.TSPDE.WHSteel: no visible global function
     definition for ‘par’
    PredictivePosteriorPlot.TSPDE.WHSteel: no visible global function
     definition for ‘plot’
    PredictivePosteriorPlot.TSPDE.WHSteel: no visible global function
     definition for ‘abline’
    PredictivePosteriorPlot.TSPDE.WHSteel: no visible global function
     definition for ‘text’
    PredictivePosteriorPlot.TSPDE.WHSteel: no visible global function
     definition for ‘close.screen’
    PredictivePosteriorPlot.TSPNDE: no visible global function definition
     for ‘split.screen’
    PredictivePosteriorPlot.TSPNDE: no visible global function definition
     for ‘screen’
    PredictivePosteriorPlot.TSPNDE: no visible global function definition
     for ‘par’
    PredictivePosteriorPlot.TSPNDE: no visible global function definition
     for ‘plot’
    PredictivePosteriorPlot.TSPNDE: no visible global function definition
     for ‘abline’
    PredictivePosteriorPlot.TSPNDE: no visible global function definition
     for ‘text’
    PredictivePosteriorPlot.TSPNDE: no visible global function definition
     for ‘close.screen’
    RunTime: no visible global function definition for ‘quantile’
    TestIfPool: no visible global function definition for ‘chisq.test’
    TimeStratPetersenDiagError: no visible global function definition for
     ‘var’
    TimeStratPetersenDiagError: no visible global function definition for
     ‘spline’
    TimeStratPetersenDiagError: no visible global function definition for
     ‘lm’
    TimeStratPetersenDiagError: no visible global function definition for
     ‘pdf’
    TimeStratPetersenDiagError: no visible global function definition for
     ‘plot’
    TimeStratPetersenDiagError: no visible global function definition for
     ‘lines’
    TimeStratPetersenDiagError: no visible global function definition for
     ‘dev.off’
    TimeStratPetersenDiagErrorWHChinook: no visible global function
     definition for ‘var’
    TimeStratPetersenDiagErrorWHChinook: no visible global function
     definition for ‘spline’
    TimeStratPetersenDiagErrorWHChinook: no visible global function
     definition for ‘lm’
    TimeStratPetersenDiagErrorWHChinook: no visible global function
     definition for ‘pdf’
    TimeStratPetersenDiagErrorWHChinook: no visible global function
     definition for ‘plot’
    TimeStratPetersenDiagErrorWHChinook: no visible global function
     definition for ‘points’
    TimeStratPetersenDiagErrorWHChinook: no visible global function
     definition for ‘lines’
    TimeStratPetersenDiagErrorWHChinook: no visible global function
     definition for ‘dev.off’
    TimeStratPetersenDiagErrorWHChinook2: no visible global function
     definition for ‘var’
    TimeStratPetersenDiagErrorWHChinook2: no visible global function
     definition for ‘lm’
    TimeStratPetersenDiagErrorWHChinook2: no visible global function
     definition for ‘pdf’
    TimeStratPetersenDiagErrorWHChinook2: no visible global function
     definition for ‘plot’
    TimeStratPetersenDiagErrorWHChinook2: no visible global function
     definition for ‘points’
    TimeStratPetersenDiagErrorWHChinook2: no visible global function
     definition for ‘lines’
    TimeStratPetersenDiagErrorWHChinook2: no visible global function
     definition for ‘dev.off’
    TimeStratPetersenDiagErrorWHChinook2 : init.vals: no visible global
     function definition for ‘lm’
    TimeStratPetersenDiagErrorWHChinook2 : init.vals: no visible global
     function definition for ‘var’
    TimeStratPetersenDiagErrorWHChinook2 : init.vals: no visible global
     function definition for ‘sd’
    TimeStratPetersenDiagErrorWHChinook2_fit: no visible global function
     definition for ‘var’
    TimeStratPetersenDiagErrorWHChinook2_fit: no visible global function
     definition for ‘runif’
    TimeStratPetersenDiagErrorWHChinook2_fit : plot_logU: no visible global
     function definition for ‘plot’
    TimeStratPetersenDiagErrorWHChinook2_fit : plot_logU: no visible global
     function definition for ‘points’
    TimeStratPetersenDiagErrorWHChinook2_fit : plot_logU: no visible global
     function definition for ‘lines’
    TimeStratPetersenDiagErrorWHChinook2_fit : plot_logU: no visible global
     function definition for ‘segments’
    TimeStratPetersenDiagErrorWHChinook2_fit: no visible global function
     definition for ‘pdf’
    TimeStratPetersenDiagErrorWHChinook2_fit: no visible global function
     definition for ‘dev.off’
    TimeStratPetersenDiagErrorWHChinook2_fit: no visible global function
     definition for ‘split.screen’
    TimeStratPetersenDiagErrorWHChinook2_fit: no visible global function
     definition for ‘screen’
    TimeStratPetersenDiagErrorWHChinook2_fit: no visible global function
     definition for ‘par’
    TimeStratPetersenDiagErrorWHChinook2_fit: no visible global function
     definition for ‘acf’
    TimeStratPetersenDiagErrorWHChinook2_fit: no visible global function
     definition for ‘close.screen’
    TimeStratPetersenDiagErrorWHChinook2_fit: no visible global function
     definition for ‘plot’
    TimeStratPetersenDiagErrorWHChinook2_fit: no visible global function
     definition for ‘density’
    TimeStratPetersenDiagErrorWHChinook2_fit: no visible global function
     definition for ‘abline’
    TimeStratPetersenDiagErrorWHChinook2_fit: no visible binding for global
     variable ‘sd’
    TimeStratPetersenDiagErrorWHChinook_fit: no visible global function
     definition for ‘var’
    TimeStratPetersenDiagErrorWHChinook_fit: no visible global function
     definition for ‘runif’
    TimeStratPetersenDiagErrorWHChinook_fit : plot_logU: no visible global
     function definition for ‘plot’
    TimeStratPetersenDiagErrorWHChinook_fit : plot_logU: no visible global
     function definition for ‘points’
    TimeStratPetersenDiagErrorWHChinook_fit : plot_logU: no visible global
     function definition for ‘lines’
    TimeStratPetersenDiagErrorWHChinook_fit : plot_logU: no visible global
     function definition for ‘segments’
    TimeStratPetersenDiagErrorWHChinook_fit: no visible global function
     definition for ‘pdf’
    TimeStratPetersenDiagErrorWHChinook_fit: no visible global function
     definition for ‘dev.off’
    TimeStratPetersenDiagErrorWHChinook_fit: no visible global function
     definition for ‘acf’
    TimeStratPetersenDiagErrorWHChinook_fit: no visible global function
     definition for ‘plot’
    TimeStratPetersenDiagErrorWHChinook_fit: no visible global function
     definition for ‘density’
    TimeStratPetersenDiagErrorWHChinook_fit: no visible global function
     definition for ‘abline’
    TimeStratPetersenDiagErrorWHChinook_fit: no visible binding for global
     variable ‘sd’
    TimeStratPetersenDiagErrorWHSteel: no visible global function
     definition for ‘var’
    TimeStratPetersenDiagErrorWHSteel: no visible global function
     definition for ‘spline’
    TimeStratPetersenDiagErrorWHSteel: no visible global function
     definition for ‘lm’
    TimeStratPetersenDiagErrorWHSteel_fit: no visible global function
     definition for ‘var’
    TimeStratPetersenDiagErrorWHSteel_fit: no visible global function
     definition for ‘runif’
    TimeStratPetersenDiagErrorWHSteel_fit : plot_logU: no visible global
     function definition for ‘plot’
    TimeStratPetersenDiagErrorWHSteel_fit : plot_logU: no visible global
     function definition for ‘points’
    TimeStratPetersenDiagErrorWHSteel_fit : plot_logU: no visible global
     function definition for ‘lines’
    TimeStratPetersenDiagErrorWHSteel_fit : plot_logU: no visible global
     function definition for ‘segments’
    TimeStratPetersenDiagErrorWHSteel_fit: no visible global function
     definition for ‘pdf’
    TimeStratPetersenDiagErrorWHSteel_fit: no visible global function
     definition for ‘dev.off’
    TimeStratPetersenDiagErrorWHSteel_fit: no visible global function
     definition for ‘acf’
    TimeStratPetersenDiagErrorWHSteel_fit: no visible global function
     definition for ‘plot’
    TimeStratPetersenDiagErrorWHSteel_fit: no visible global function
     definition for ‘density’
    TimeStratPetersenDiagErrorWHSteel_fit: no visible global function
     definition for ‘abline’
    TimeStratPetersenDiagErrorWHSteel_fit: no visible binding for global
     variable ‘sd’
    TimeStratPetersenDiagError_fit: no visible global function definition
     for ‘var’
    TimeStratPetersenDiagError_fit: no visible global function definition
     for ‘runif’
    TimeStratPetersenDiagError_fit : plot_logU: no visible global function
     definition for ‘plot’
    TimeStratPetersenDiagError_fit : plot_logU: no visible global function
     definition for ‘points’
    TimeStratPetersenDiagError_fit : plot_logU: no visible global function
     definition for ‘lines’
    TimeStratPetersenDiagError_fit : plot_logU: no visible global function
     definition for ‘segments’
    TimeStratPetersenDiagError_fit: no visible global function definition
     for ‘pdf’
    TimeStratPetersenDiagError_fit: no visible global function definition
     for ‘dev.off’
    TimeStratPetersenDiagError_fit: no visible global function definition
     for ‘acf’
    TimeStratPetersenDiagError_fit: no visible global function definition
     for ‘plot’
    TimeStratPetersenDiagError_fit: no visible global function definition
     for ‘density’
    TimeStratPetersenDiagError_fit: no visible global function definition
     for ‘abline’
    TimeStratPetersenDiagError_fit: no visible binding for global variable
     ‘sd’
    TimeStratPetersenNonDiagError: no visible global function definition
     for ‘spline’
    TimeStratPetersenNonDiagError: no visible global function definition
     for ‘lm’
    TimeStratPetersenNonDiagError: no visible global function definition
     for ‘pdf’
    TimeStratPetersenNonDiagError: no visible global function definition
     for ‘plot’
    TimeStratPetersenNonDiagError: no visible global function definition
     for ‘lines’
    TimeStratPetersenNonDiagError: no visible global function definition
     for ‘dev.off’
    TimeStratPetersenNonDiagErrorNP: no visible global function definition
     for ‘spline’
    TimeStratPetersenNonDiagErrorNP: no visible global function definition
     for ‘lm’
    TimeStratPetersenNonDiagErrorNP: no visible global function definition
     for ‘pdf’
    TimeStratPetersenNonDiagErrorNP: no visible global function definition
     for ‘plot’
    TimeStratPetersenNonDiagErrorNP: no visible global function definition
     for ‘lines’
    TimeStratPetersenNonDiagErrorNP: no visible global function definition
     for ‘dev.off’
    TimeStratPetersenNonDiagErrorNPMarkAvail: no visible global function
     definition for ‘lm’
    TimeStratPetersenNonDiagErrorNPMarkAvail: no visible global function
     definition for ‘pdf’
    TimeStratPetersenNonDiagErrorNPMarkAvail: no visible global function
     definition for ‘plot’
    TimeStratPetersenNonDiagErrorNPMarkAvail: no visible global function
     definition for ‘lines’
    TimeStratPetersenNonDiagErrorNPMarkAvail: no visible global function
     definition for ‘dev.off’
    TimeStratPetersenNonDiagErrorNPMarkAvail : init.vals: no visible global
     function definition for ‘lm’
    TimeStratPetersenNonDiagErrorNPMarkAvail : init.vals: no visible global
     function definition for ‘var’
    TimeStratPetersenNonDiagErrorNPMarkAvail : init.vals: no visible global
     function definition for ‘sd’
    TimeStratPetersenNonDiagErrorNPMarkAvail_fit: no visible global
     function definition for ‘runif’
    TimeStratPetersenNonDiagErrorNPMarkAvail_fit: no visible global
     function definition for ‘var’
    TimeStratPetersenNonDiagErrorNPMarkAvail_fit : plot_logU: no visible
     global function definition for ‘plot’
    TimeStratPetersenNonDiagErrorNPMarkAvail_fit : plot_logU: no visible
     global function definition for ‘points’
    TimeStratPetersenNonDiagErrorNPMarkAvail_fit : plot_logU: no visible
     global function definition for ‘lines’
    TimeStratPetersenNonDiagErrorNPMarkAvail_fit : plot_logU: no visible
     global function definition for ‘segments’
    TimeStratPetersenNonDiagErrorNPMarkAvail_fit: no visible global
     function definition for ‘pdf’
    TimeStratPetersenNonDiagErrorNPMarkAvail_fit: no visible global
     function definition for ‘dev.off’
    TimeStratPetersenNonDiagErrorNPMarkAvail_fit: no visible global
     function definition for ‘acf’
    TimeStratPetersenNonDiagErrorNPMarkAvail_fit: no visible global
     function definition for ‘plot’
    TimeStratPetersenNonDiagErrorNPMarkAvail_fit: no visible global
     function definition for ‘density’
    TimeStratPetersenNonDiagErrorNPMarkAvail_fit: no visible global
     function definition for ‘abline’
    TimeStratPetersenNonDiagErrorNPMarkAvail_fit: no visible binding for
     global variable ‘sd’
    TimeStratPetersenNonDiagErrorNP_fit: no visible global function
     definition for ‘runif’
    TimeStratPetersenNonDiagErrorNP_fit: no visible global function
     definition for ‘var’
    TimeStratPetersenNonDiagErrorNP_fit : plot_logU: no visible global
     function definition for ‘plot’
    TimeStratPetersenNonDiagErrorNP_fit : plot_logU: no visible global
     function definition for ‘points’
    TimeStratPetersenNonDiagErrorNP_fit : plot_logU: no visible global
     function definition for ‘lines’
    TimeStratPetersenNonDiagErrorNP_fit : plot_logU: no visible global
     function definition for ‘segments’
    TimeStratPetersenNonDiagErrorNP_fit: no visible global function
     definition for ‘pdf’
    TimeStratPetersenNonDiagErrorNP_fit: no visible global function
     definition for ‘dev.off’
    TimeStratPetersenNonDiagErrorNP_fit: no visible global function
     definition for ‘acf’
    TimeStratPetersenNonDiagErrorNP_fit: no visible global function
     definition for ‘plot’
    TimeStratPetersenNonDiagErrorNP_fit: no visible global function
     definition for ‘density’
    TimeStratPetersenNonDiagErrorNP_fit: no visible global function
     definition for ‘abline’
    TimeStratPetersenNonDiagErrorNP_fit: no visible binding for global
     variable ‘sd’
    TimeStratPetersenNonDiagError_fit: no visible global function
     definition for ‘runif’
    TimeStratPetersenNonDiagError_fit: no visible global function
     definition for ‘var’
    TimeStratPetersenNonDiagError_fit : plot_logU: no visible global
     function definition for ‘plot’
    TimeStratPetersenNonDiagError_fit : plot_logU: no visible global
     function definition for ‘points’
    TimeStratPetersenNonDiagError_fit : plot_logU: no visible global
     function definition for ‘lines’
    TimeStratPetersenNonDiagError_fit : plot_logU: no visible global
     function definition for ‘segments’
    TimeStratPetersenNonDiagError_fit: no visible global function
     definition for ‘pdf’
    TimeStratPetersenNonDiagError_fit: no visible global function
     definition for ‘dev.off’
    TimeStratPetersenNonDiagError_fit: no visible global function
     definition for ‘acf’
    TimeStratPetersenNonDiagError_fit: no visible global function
     definition for ‘plot’
    TimeStratPetersenNonDiagError_fit: no visible global function
     definition for ‘density’
    TimeStratPetersenNonDiagError_fit: no visible global function
     definition for ‘abline’
    TimeStratPetersenNonDiagError_fit: no visible global function
     definition for ‘lines’
    TimeStratPetersenNonDiagError_fit: no visible global function
     definition for ‘segments’
    TimeStratPetersenNonDiagError_fit: no visible binding for global
     variable ‘sd’
    TimeToTargetRunSize: no visible global function definition for ‘approx’
    TimeToTargetRunSize: no visible global function definition for ‘median’
    TimeToTargetRunSize: no visible global function definition for ‘sd’
    TimeToTargetRunSize: no visible global function definition for
     ‘quantile’
    TimeToTargetRunSize: no visible global function definition for ‘pdf’
    TimeToTargetRunSize: no visible global function definition for
     ‘density’
    TimeToTargetRunSize: no visible global function definition for ‘plot’
    TimeToTargetRunSize: no visible global function definition for ‘text’
    TimeToTargetRunSize: no visible global function definition for
     ‘dev.off’
    genInitValsChain : <anonymous>: no visible global function definition
     for ‘pnorm’
    genInitValsChain: no visible global function definition for ‘lm’
    genInitValsChain: no visible global function definition for ‘var’
    genInitValsChain: no visible global function definition for ‘sd’
    genInitValsChain: no visible global function definition for ‘rnorm’
    genInitValsChain: no visible global function definition for ‘median’
    genInitsTTln: no visible global function definition for ‘var’
    genInitsTTnp: no visible global function definition for ‘sd’
    lnTheta : <anonymous>: no visible global function definition for
     ‘pnorm’
    run.jags : <anonymous>: no visible global function definition for
     ‘runif’
    run.jags : <anonymous>: no visible global function definition for
     ‘write.table’
    run.openbugs: no visible global function definition for ‘flush.console’
    simTSPNDE : <anonymous>: no visible global function definition for
     ‘rmultinom’
    simTSPNDE: no visible global function definition for ‘rbinom’
    trace_plot: no visible global function definition for ‘split.screen’
    trace_plot: no visible global function definition for ‘par’
    trace_plot: no visible global function definition for ‘screen’
    trace_plot: no visible global function definition for ‘matplot’
    trace_plot: no visible global function definition for ‘text’
    trace_plot: no visible global function definition for ‘close.screen’
    visualize.muTT.prior: no visible global function definition for ‘rnorm’
    visualize.muTT.prior: no visible global function definition for ‘stack’
    visualize.muTT.prior: no visible global function definition for
     ‘boxplot’
    Undefined global functions or variables:
     abline acf approx boxplot chisq.test close.screen dbinom density
     dev.off dmultinom flush.console lines lm matplot median par pdf plot
     pnorm points quantile rbinom rmultinom rnorm runif screen sd segments
     spline split.screen stack text var write.table
    Consider adding
     importFrom("grDevices", "dev.off", "pdf")
     importFrom("graphics", "abline", "boxplot", "close.screen", "lines",
     "matplot", "par", "plot", "points", "screen", "segments",
     "split.screen", "text")
     importFrom("stats", "acf", "approx", "chisq.test", "dbinom", "density",
     "dmultinom", "lm", "median", "pnorm", "quantile", "rbinom",
     "rmultinom", "rnorm", "runif", "sd", "spline", "var")
     importFrom("utils", "flush.console", "stack", "write.table")
    to your NAMESPACE.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64

Version: 2014.0901
Check: package dependencies
Result: NOTE
    Package suggested but not available for checking: ‘BRugs’
Flavors: r-devel-osx-x86_64-clang, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-osx-x86_64-mavericks