CRAN Package Check Results for Package BaM

Last updated on 2014-07-29 17:47:47.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.99 2.68 25.92 28.60 NOTE
r-devel-linux-x86_64-debian-gcc 0.99 2.79 25.31 28.10 NOTE
r-devel-linux-x86_64-fedora-clang 0.99 57.63 NOTE
r-devel-linux-x86_64-fedora-gcc 0.99 55.57 NOTE
r-devel-osx-x86_64-clang 0.99 53.56 NOTE
r-devel-windows-ix86+x86_64 0.99 10.00 42.00 52.00 NOTE
r-patched-linux-x86_64 0.99 2.73 26.22 28.95 NOTE
r-patched-solaris-sparc 0.99 331.50 NOTE
r-patched-solaris-x86 0.99 75.30 NOTE
r-release-linux-ix86 0.99 3.68 35.09 38.78 NOTE
r-release-linux-x86_64 0.99 2.78 26.46 29.23 NOTE
r-release-osx-x86_64-mavericks 0.99 NOTE
r-release-windows-ix86+x86_64 0.99 10.00 41.00 51.00 NOTE
r-oldrel-windows-ix86+x86_64 0.99 11.00 44.00 55.00 NOTE

Check Details

Version: 0.99
Check: package dependencies
Result: NOTE
    Depends: includes the non-default packages:
     bayesm coda MASS mice survival foreign nnet
    Adding so many packages to the search path is excessive and importing
    selectively is preferable.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-ix86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-windows-ix86+x86_64

Version: 0.99
Check: R code for possible problems
Result: NOTE
    biv.norm.post: possible error in rwishart(alpha + n, SqrtSigma =
     chol(solve(Wp.inv))): unused argument (SqrtSigma =
     chol(solve(Wp.inv)))
    biv.norm.post: no visible global function definition for rmultinorm
    mhplot.walk.MH: possible error in mhplot(walk.mat[1, 1], walk.mat[1,
     2], type = "n", xlim = round(range(walk.mat[, 1]) * 1.2), ylim =
     round(range(walk.mat[, 2]) * 1.2), xlab = "", ylab = ""): unused
     arguments (walk.mat[1, 2], type = "n", xlim = round(range(walk.mat[,
     1]) * 1.2), ylim = round(range(walk.mat[, 2]) * 1.2), xlab = "", ylab
     = "")
    sir: no visible binding for global variable normal.posterior.ll
    sir: no visible binding for global variable t.posterior.ll
    
    Found the following calls to data() loading into the global environment:
    File BaM/R/china.wars.R :
     data(wars)
    See section Good practice in ?data .
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-osx-x86_64-clang, r-patched-linux-x86_64, r-release-linux-ix86, r-release-linux-x86_64

Version: 0.99
Check: top-level files
Result: NOTE
    Non-standard file/directory found at top level:
     CONTENTS
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Version: 0.99
Check: R code for possible problems
Result: NOTE
    biv.norm.post: possible error in rwishart(alpha + n, SqrtSigma =
     chol(solve(Wp.inv))): unused argument (SqrtSigma =
     chol(solve(Wp.inv)))
    biv.norm.post: no visible global function definition for rmultinorm
    mhplot.walk.MH: possible error in mhplot(walk.mat[1, 1], walk.mat[1,
     2], type = "n", xlim = round(range(walk.mat[, 1]) * 1.2), ylim =
     round(range(walk.mat[, 2]) * 1.2), xlab = "", ylab = ""): unused
     arguments (walk.mat[1, 2], type = "n", xlim = round(range(walk.mat[,
     1]) * 1.2), ylim = round(range(walk.mat[, 2]) * 1.2), xlab = "", ylab
     = "")
    sir: no visible binding for global variable normal.posterior.ll
    sir: no visible binding for global variable t.posterior.ll
Flavors: r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-osx-x86_64-mavericks, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64