CRAN Package Check Results for Package BayesFactor

Last updated on 2015-09-03 23:47:23.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.9.11-1 87.14 142.89 230.03 NOTE
r-devel-linux-x86_64-debian-gcc 0.9.11-1 92.51 139.16 231.67 NOTE
r-devel-linux-x86_64-fedora-clang 0.9.11-1 489.94 NOTE
r-devel-linux-x86_64-fedora-gcc 0.9.11-1 439.65 NOTE
r-devel-osx-x86_64-clang 0.9.11-1 308.13 OK
r-devel-windows-ix86+x86_64 0.9.11-1 239.00 249.00 488.00 NOTE
r-patched-linux-x86_64 0.9.11-1 87.93 139.94 227.87 NOTE
r-patched-solaris-sparc 0.9.11-1 3237.10 OK
r-patched-solaris-x86 0.9.11-1 534.00 OK
r-release-linux-x86_64 0.9.11-1 88.82 135.75 224.57 NOTE
r-release-osx-x86_64-mavericks 0.9.11-1 NOTE
r-release-windows-ix86+x86_64 0.9.11-1 329.00 282.00 611.00 NOTE
r-oldrel-windows-ix86+x86_64 0.9.11-1 349.00 326.00 675.00 NOTE

Check Details

Version: 0.9.11-1
Check: installed package size
Result: NOTE
     installed size is 14.3Mb
     sub-directories of 1Mb or more:
     doc 1.5Mb
     libs 12.2Mb
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-osx-x86_64-mavericks

Version: 0.9.11-1
Check: R code for possible problems
Result: NOTE
    BFBayesFactor: no visible global function definition for ‘new’
    BFBayesFactorList: no visible global function definition for ‘new’
    BFBayesFactorTop : <anonymous>: no visible global function definition
     for ‘formula’
    BFBayesFactorTop : <anonymous>: no visible global function definition
     for ‘terms’
    BFBayesFactorTop: no visible global function definition for ‘terms’
    BFBayesFactorTop: no visible global function definition for ‘formula’
    BFBayesFactorTop: no visible global function definition for ‘new’
    BFManual: no visible global function definition for ‘vignette’
    BFcontingencyTable: no visible global function definition for ‘new’
    BFindepSample: no visible global function definition for ‘new’
    BFlinearModel: no visible global function definition for ‘new’
    BFmetat: no visible global function definition for ‘new’
    BFmodel: no visible global function definition for ‘new’
    BFodds: no visible global function definition for ‘new’
    BFoneSample: no visible global function definition for ‘new’
    BFprobability: no visible global function definition for ‘new’
    BFproportion: no visible global function definition for ‘new’
    anovaBF: no visible global function definition for ‘txtProgressBar’
    anovaBF: no visible global function definition for ‘setTxtProgressBar’
    as.data.frame.BFmcmc: no visible global function definition for
     ‘S3Part’
    as.matrix.BFmcmc: no visible global function definition for ‘S3Part’
    as.mcmc.BFmcmc: no visible global function definition for ‘S3Part’
    c.BFodds: no visible global function definition for ‘new’
    combineModels: no visible binding for global variable ‘.hasSlot’
    combn2 : <anonymous>: no visible global function definition for ‘combn’
    createDataTypes: no visible global function definition for ‘terms’
    enumerateAnovaModels: no visible global function definition for ‘terms’
    enumerateAnovaModels: no visible global function definition for ‘combn’
    enumerateAnovaModels : <anonymous>: no visible global function
     definition for ‘formula’
    enumerateGeneralModels: no visible global function definition for
     ‘terms’
    enumerateGeneralModels: no visible global function definition for
     ‘combn’
    enumerateGeneralModels : <anonymous>: no visible global function
     definition for ‘formula’
    enumerateRegressionModels: no visible global function definition for
     ‘terms’
    enumerateRegressionModels: no visible global function definition for
     ‘combn’
    enumerateRegressionModels : <anonymous>: no visible global function
     definition for ‘formula’
    fmlaFactors: no visible global function definition for ‘terms’
    fullDesignMatrix: no visible global function definition for ‘terms’
    gaussianApproxAOV: no visible global function definition for ‘var’
    gaussianApproxAOV: no visible global function definition for ‘optim’
    gaussianApproxAOV: no visible global function definition for ‘nlm’
    generalTestBF: no visible global function definition for
     ‘txtProgressBar’
    generalTestBF: no visible global function definition for
     ‘setTxtProgressBar’
    laplaceAOV: no visible global function definition for ‘dnorm’
    linearReg.R2stat: no visible global function definition for ‘integrate’
    meta.bf.interval: no visible global function definition for ‘dt’
    meta.bf.interval: no visible global function definition for ‘pcauchy’
    meta.bf.interval: no visible global function definition for ‘integrate’
    meta.bf.interval_approx: no visible global function definition for
     ‘pcauchy’
    meta.bf.interval_approx: no visible global function definition for ‘pt’
    meta.t.bf: no visible global function definition for ‘pcauchy’
    oneDesignMatrix: no visible global function definition for ‘formula’
    oneWayAOV.Fstat: no visible global function definition for ‘integrate’
    plot.BFBayesFactor: no visible global function definition for ‘par’
    plot.BFBayesFactor: no visible global function definition for ‘barplot’
    plot.BFBayesFactor: no visible global function definition for
     ‘segments’
    plot.BFBayesFactor : <anonymous>: no visible global function definition
     for ‘text’
    plot.BFBayesFactor: no visible global function definition for ‘axis’
    plot.BFBayesFactor: no visible global function definition for ‘abline’
    plot.BFBayesFactorTop: no visible global function definition for ‘par’
    plot.BFBayesFactorTop: no visible global function definition for
     ‘barplot’
    plot.BFBayesFactorTop: no visible global function definition for
     ‘segments’
    plot.BFBayesFactorTop : <anonymous>: no visible global function
     definition for ‘text’
    plot.BFBayesFactorTop: no visible global function definition for ‘axis’
    plot.BFBayesFactorTop: no visible global function definition for
     ‘abline’
    prop.test.bf: no visible global function definition for ‘qlogis’
    prop.test.bf: no visible global function definition for ‘plogis’
    prop.test.bf.interval: no visible global function definition for
     ‘plogis’
    prop.test.bf.interval: no visible global function definition for
     ‘qlogis’
    prop.test.bf.interval: no visible global function definition for
     ‘integrate’
    prop.test.bf.interval: no visible global function definition for
     ‘dbinom’
    proportion.Metrop: no visible global function definition for ‘qlogis’
    proportion.Metrop: no visible global function definition for ‘plogis’
    regressionBF: no visible global function definition for
     ‘txtProgressBar’
    regressionBF: no visible global function definition for
     ‘setTxtProgressBar’
    rowMultiply: no visible global function definition for ‘is’
    samplePoissonContingencyAlt: no visible global function definition for
     ‘rgamma’
    samplePoissonContingencyNull: no visible global function definition for
     ‘rgamma’
    singleGBayesFactor: no visible global function definition for ‘t.test’
    singleGBayesFactor: no visible global function definition for ‘var’
    singleGBayesFactor: no visible global function definition for ‘optim’
    singleGBayesFactor: no visible global function definition for
     ‘integrate’
    termLevels: no visible global function definition for ‘terms’
    termTypes: no visible global function definition for ‘terms’
    ttestIndepSample.Gibbs: no visible binding for global variable ‘var’
    ttestOneSample.Gibbs: no visible global function definition for ‘var’
    whichOmitted: no visible global function definition for ‘formula’
    whichOmitted: no visible global function definition for ‘terms’
    %same%,BFmodel-BFmodel: no visible global function definition for
     ‘slotNames’
    %same%,BFmodel-BFmodel : <anonymous>: no visible global function
     definition for ‘slot’
    *,BFodds-BFBayesFactor: no visible global function definition for ‘new’
    /,BFBayesFactor-BFBayesFactor: no visible global function definition
     for ‘as’
    /,BFodds-BFodds: no visible global function definition for ‘new’
    /,numeric-BFBayesFactor: no visible global function definition for ‘as’
    /,numeric-BFodds: no visible global function definition for ‘new’
    /,numeric-BFodds: no visible global function definition for ‘as’
    [,BFBayesFactorList-missing-index-missing: no visible global function
     definition for ‘as’
    [,BFBayesFactorTop-index-missing-missing: no visible global function
     definition for ‘as’
    coerce<-,BFBayesFactorTop-BFBayesFactor: no visible global function
     definition for ‘slot<-’
    coerce<-,BFBayesFactorTop-BFBayesFactor: no visible global function
     definition for ‘slot’
    coerce<-,BFmcmc-mcmc: no visible global function definition for
     ‘S3Part<-’
    compare,BFindepSample-missing-data.frame: no visible global function
     definition for ‘terms’
    compare,BFindepSample-missing-data.frame: no visible global function
     definition for ‘t.test’
    compare,BFlinearModel-BFlinearModel-data.frame: no visible global
     function definition for ‘formula’
    compare,BFlinearModel-missing-data.frame: no visible global function
     definition for ‘.hasSlot’
    compare,BFlinearModel-missing-data.frame: no visible global function
     definition for ‘lm’
    compare,BFlinearModel-missing-data.frame: no visible global function
     definition for ‘terms’
    compare,BFlinearModel-missing-data.frame: no visible global function
     definition for ‘t.test’
    compare,BFlinearModel-missing-data.frame: no visible global function
     definition for ‘aov’
    compare,BFoneSample-missing-data.frame: no visible global function
     definition for ‘terms’
    compare,BFoneSample-missing-data.frame: no visible global function
     definition for ‘sd’
    posterior,BFcontingencyTable-missing-data.frame-numeric: no visible
     global function definition for ‘formula’
    posterior,BFcontingencyTable-missing-data.frame-numeric: no visible
     global function definition for ‘new’
    posterior,BFindepSample-missing-data.frame-numeric: no visible global
     function definition for ‘new’
    posterior,BFlinearModel-missing-data.frame-numeric: no visible global
     function definition for ‘new’
    posterior,BFmetat-missing-data.frame-numeric: no visible global
     function definition for ‘new’
    posterior,BFoneSample-missing-data.frame-numeric: no visible global
     function definition for ‘new’
    posterior,BFproportion-missing-data.frame-numeric: no visible global
     function definition for ‘new’
    recompute,BFBayesFactor: no visible global function definition for
     ‘txtProgressBar’
    recompute,BFBayesFactor: no visible global function definition for
     ‘setTxtProgressBar’
    show,BFBayesFactorList: no visible global function definition for ‘as’
    show,BFmcmc: no visible global function definition for ‘S3Part’
    Undefined global functions or variables:
     .hasSlot S3Part S3Part<- abline aov as axis barplot combn dbinom
     dnorm dt formula integrate is lm new nlm optim par pcauchy plogis pt
     qlogis rgamma sd segments setTxtProgressBar slot slot<- slotNames
     t.test terms text txtProgressBar var vignette
    Consider adding
     importFrom("graphics", "abline", "axis", "barplot", "par", "segments",
     "text")
     importFrom("methods", ".hasSlot", "S3Part", "S3Part<-", "as", "is",
     "new", "slot", "slot<-", "slotNames")
     importFrom("stats", "aov", "dbinom", "dnorm", "dt", "formula",
     "integrate", "lm", "nlm", "optim", "pcauchy", "plogis",
     "pt", "qlogis", "rgamma", "sd", "t.test", "terms", "var")
     importFrom("utils", "combn", "setTxtProgressBar", "txtProgressBar",
     "vignette")
    to your NAMESPACE (and ensure that your DESCRIPTION Imports field
    contains 'methods').
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64

Version: 0.9.11-1
Check: package dependencies
Result: NOTE
    Package suggested but not available for checking: 'doMC'
Flavors: r-devel-windows-ix86+x86_64, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64