CRAN Package Check Results for Package BioGeoBEARS

Last updated on 2014-04-23 12:48:14.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.2.1 14.19 84.46 98.66 NOTE
r-devel-linux-x86_64-debian-gcc 0.2.1 13.90 85.10 99.00 NOTE
r-devel-linux-x86_64-fedora-clang 0.2.1 202.68 NOTE
r-devel-linux-x86_64-fedora-gcc 0.2.1 189.82 NOTE
r-devel-osx-x86_64-clang 0.2.1 165.97 NOTE
r-devel-osx-x86_64-gcc 0.2.1 ERROR
r-devel-windows-ix86+x86_64 0.2.1 29.00 121.00 150.00 NOTE
r-patched-linux-x86_64 0.2.1 13.98 83.87 97.86 NOTE
r-patched-solaris-sparc 0.2.1 1087.80 NOTE
r-patched-solaris-x86 0.2.1 220.30 NOTE
r-release-linux-ix86 0.2.1 20.00 129.00 149.00 NOTE
r-release-linux-x86_64 0.2.1 14.96 84.51 99.47 NOTE
r-release-osx-x86_64-mavericks 0.2.1 WARN
r-release-osx-x86_64-snowleopard 0.2.1 NOTE
r-release-windows-ix86+x86_64 0.2.1 32.00 132.00 164.00 NOTE
r-oldrel-windows-ix86+x86_64 0.2.1 31.00 145.00 176.00 NOTE

Check Details

Version: 0.2.1
Check: dependencies in R code
Result: NOTE
    'library' or 'require' calls to packages already attached by Depends:
     ‘ape’ ‘cladoRcpp’ ‘phylobase’ ‘rexpokit’
     Please remove these calls from your code.
    Packages in Depends field not imported from:
     ‘ape’ ‘cladoRcpp’ ‘methods’ ‘phylobase’ ‘rexpokit’
     These packages need to be imported from (in the NAMESPACE file)
     for when this namespace is loaded but not attached.
    ':::' calls which should be '::':
     ‘ape:::floating.pie.asp’ ‘cladoRcpp:::areas_list_to_states_list_old’
     See the note in ?`:::` about the use of this operator.
    See the information on DESCRIPTION files in the chapter ‘Creating R
    packages’ of the ‘Writing R Extensions’ manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-ix86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 0.2.1
Check: package dependencies
Result: ERROR
    Package required but not available: ‘FD’
    
    See the information on DESCRIPTION files in the chapter ‘Creating R
    packages’ of the ‘Writing R Extensions’ manual.
Flavor: r-devel-osx-x86_64-gcc

Version: 0.2.1
Check: DESCRIPTION meta-information
Result: NOTE
    'LinkingTo' field is unused: package has no 'src' directory
Flavors: r-devel-windows-ix86+x86_64, r-release-windows-ix86+x86_64

Version: 0.2.1
Check: PDF version of manual
Result: WARNING
    LaTeX errors when creating PDF version.
    This typically indicates Rd problems.
    LaTeX errors found:
    ! LaTeX Error: File `upquote.sty' not found.
    
    Type X to quit or <RETURN> to proceed,
    or enter new name. (Default extension: sty)
    
    90e21fd/Rd2.tex:8: ==> Fatal error occurred, no output PDF file produced!
Flavor: r-release-osx-x86_64-mavericks

Version: 0.2.1
Check: dependencies in R code
Result: NOTE
    'library' or 'require' calls to packages already attached by Depends:
     'ape' 'cladoRcpp' 'phylobase' 'rexpokit'
     Please remove these calls from your code.
    Packages in Depends field not imported from:
     'ape' 'cladoRcpp' 'methods' 'phylobase' 'rexpokit'
     These packages need to be imported from for the case when
     this namespace is loaded but not attached.
    ':::' call which should be '::': 'ape:::floating.pie.asp'
     See the note in ?`:::` about the use of this operator.
    See the information on DESCRIPTION files in the chapter 'Creating R
    packages' of the 'Writing R Extensions' manual.
Flavor: r-release-osx-x86_64-snowleopard