CRAN Package Check Results for Package BioMark

Last updated on 2014-04-17 20:47:31.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.4.1 3.83 61.10 64.94 NOTE
r-devel-linux-x86_64-debian-gcc 0.4.1 4.64 60.70 65.34 NOTE
r-devel-linux-x86_64-fedora-clang 0.4.1 142.22 NOTE
r-devel-linux-x86_64-fedora-gcc 0.4.1 139.63 NOTE
r-devel-macosx-x86_64-clang 0.4.1 115.92 NOTE
r-devel-macosx-x86_64-gcc 0.4.1 NOTE
r-devel-windows-ix86+x86_64 0.4.1 11.00 85.00 96.00 NOTE
r-patched-linux-x86_64 0.4.1 4.29 60.29 64.58 NOTE
r-patched-solaris-sparc 0.4.1 899.70 NOTE
r-patched-solaris-x86 0.4.1 200.30 NOTE
r-release-linux-ix86 0.4.1 7.00 134.00 141.00 NOTE
r-release-linux-x86_64 0.4.1 4.10 60.86 64.96 NOTE
r-release-windows-ix86+x86_64 0.4.1 9.00 84.00 93.00 NOTE
r-oldrel-windows-ix86+x86_64 0.4.1 10.00 78.00 88.00 NOTE

Check Details

Version: 0.4.1
Check: dependencies in R code
Result: NOTE
    Packages in Depends field not imported from:
     ‘glmnet’ ‘pls’ ‘st’
     These packages need to be imported from (in the NAMESPACE file)
     for when this namespace is loaded but not attached.
    See the information on DESCRIPTION files in the chapter ‘Creating R
    packages’ of the ‘Writing R Extensions’ manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-macosx-x86_64-clang, r-devel-macosx-x86_64-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-ix86, r-release-linux-x86_64, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 0.4.1
Check: R code for possible problems
Result: NOTE
    Found the following assignments to the global environment:
    File ‘BioMark/R/biom.options.R’:
     assign(".biom.options", current, pos = .GlobalEnv)
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-macosx-x86_64-clang, r-patched-linux-x86_64, r-release-linux-ix86, r-release-linux-x86_64