CRAN Package Check Results for Package BioMark

Last updated on 2014-07-22 23:48:15.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.4.1 3.61 58.49 62.10 NOTE
r-devel-linux-x86_64-debian-gcc 0.4.1 3.72 58.33 62.05 NOTE
r-devel-linux-x86_64-fedora-clang 0.4.1 145.19 NOTE
r-devel-linux-x86_64-fedora-gcc 0.4.1 138.33 NOTE
r-devel-osx-x86_64-clang 0.4.1 113.98 NOTE
r-devel-windows-ix86+x86_64 0.4.1 11.00 84.00 95.00 NOTE
r-patched-linux-x86_64 0.4.1 3.72 58.48 62.19 NOTE
r-patched-solaris-sparc 0.4.1 899.70 NOTE
r-patched-solaris-x86 0.4.1 197.30 NOTE
r-release-linux-ix86 0.4.1 4.42 72.16 76.58 NOTE
r-release-linux-x86_64 0.4.1 3.74 59.04 62.78 NOTE
r-release-osx-x86_64-mavericks 0.4.1 NOTE
r-release-windows-ix86+x86_64 0.4.1 13.00 84.00 97.00 NOTE
r-oldrel-windows-ix86+x86_64 0.4.1 12.00 82.00 94.00 NOTE

Check Details

Version: 0.4.1
Check: dependencies in R code
Result: NOTE
    Packages in Depends field not imported from:
     ‘glmnet’ ‘pls’ ‘st’
     These packages need to be imported from (in the NAMESPACE file)
     for when this namespace is loaded but not attached.
    See the information on DESCRIPTION files in the chapter ‘Creating R
    packages’ of the ‘Writing R Extensions’ manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-ix86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 0.4.1
Check: R code for possible problems
Result: NOTE
    Found the following assignments to the global environment:
    File ‘BioMark/R/biom.options.R’:
     assign(".biom.options", current, pos = .GlobalEnv)
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-osx-x86_64-clang, r-patched-linux-x86_64, r-release-linux-ix86, r-release-linux-x86_64