CRAN Package Check Results for Package BioMark

Last updated on 2014-07-31 03:48:29.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.4.1 3.65 59.08 62.73 NOTE
r-devel-linux-x86_64-debian-gcc 0.4.1 3.63 57.23 60.86 NOTE
r-devel-linux-x86_64-fedora-clang 0.4.1 140.60 NOTE
r-devel-linux-x86_64-fedora-gcc 0.4.1 137.32 NOTE
r-devel-osx-x86_64-clang 0.4.1 111.43 NOTE
r-devel-windows-ix86+x86_64 0.4.1 11.00 85.00 96.00 NOTE
r-patched-linux-x86_64 0.4.1 3.83 57.81 61.64 NOTE
r-patched-solaris-sparc 0.4.1 909.00 NOTE
r-patched-solaris-x86 0.4.1 200.60 NOTE
r-release-linux-ix86 0.4.1 4.39 71.01 75.40 NOTE
r-release-linux-x86_64 0.4.1 3.85 58.99 62.84 NOTE
r-release-osx-x86_64-mavericks 0.4.1 NOTE
r-release-windows-ix86+x86_64 0.4.1 17.00 118.00 135.00 NOTE
r-oldrel-windows-ix86+x86_64 0.4.1 16.00 111.00 127.00 NOTE

Check Details

Version: 0.4.1
Check: dependencies in R code
Result: NOTE
    Packages in Depends field not imported from:
     glmnet pls st
     These packages need to be imported from (in the NAMESPACE file)
     for when this namespace is loaded but not attached.
    See the information on DESCRIPTION files in the chapter Creating R
    packages of the Writing R Extensions manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-ix86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 0.4.1
Check: R code for possible problems
Result: NOTE
    Found the following assignments to the global environment:
    File BioMark/R/biom.options.R :
     assign(".biom.options", current, pos = .GlobalEnv)
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-osx-x86_64-clang, r-patched-linux-x86_64, r-release-linux-ix86, r-release-linux-x86_64