CRAN Package Check Results for Package BiodiversityR

Last updated on 2014-10-21 12:49:02.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 2.4-4 3.26 75.56 78.82 NOTE
r-devel-linux-x86_64-debian-gcc 2.4-4 3.30 73.99 77.30 NOTE
r-devel-linux-x86_64-fedora-clang 2.4-4 164.26 NOTE
r-devel-linux-x86_64-fedora-gcc 2.4-4 152.47 NOTE
r-devel-osx-x86_64-clang 2.4-4 160.15 NOTE
r-devel-windows-ix86+x86_64 2.4-4 22.00 126.00 148.00 NOTE
r-patched-linux-x86_64 2.4-4 3.52 77.07 80.59 NOTE
r-patched-solaris-sparc 2.4-4 875.30 NOTE
r-patched-solaris-x86 2.4-4 199.30 NOTE
r-release-linux-ix86 2.4-4 0.64 1.67 2.31 ERROR
r-release-linux-x86_64 2.4-4 3.56 87.26 90.82 OK
r-release-osx-x86_64-mavericks 2.4-4 NOTE
r-release-osx-x86_64-snowleopard 2.4-4 OK
r-release-windows-ix86+x86_64 2.4-4 26.00 142.00 168.00 OK
r-oldrel-windows-ix86+x86_64 2.4-4 20.00 139.00 159.00 OK

Check Details

Version: 2.4-4
Check: R code for possible problems
Result: NOTE
    CAPdiscrim : CAPresult: no visible global function definition for ‘lda’
    CAPdiscrim: no visible global function definition for ‘vegdist’
    NMSrandom: no visible global function definition for ‘isoMDS’
    NMSrandom: no visible global function definition for ‘initMDS’
    NMSrandom: no visible global function definition for ‘sammon’
    accumresult: no visible global function definition for ‘specaccum’
    add.spec.scores: no visible global function definition for ‘scores’
    add.spec.scores: no visible global function definition for ‘wascores’
    caprescale: no visible global function definition for ‘scores’
    caprescale: no visible global function definition for ‘vegdist’
    check.ordiscores: no visible global function definition for ‘scores’
    dist.eval: no visible global function definition for ‘vegdist’
    dist.eval: no visible global function definition for ‘no.shared’
    dist.eval: no visible global function definition for ‘distconnected’
    distdisplayed: no visible global function definition for ‘vegdist’
    distdisplayed: no visible global function definition for ‘scores’
    distdisplayed: no visible global function definition for ‘mantel’
    disttransform: no visible global function definition for ‘decostand’
    diversityresult : diversityresult0: no visible global function
     definition for ‘diversity’
    diversityresult : diversityresult0: no visible global function
     definition for ‘fisher.alpha’
    diversityresult : diversityresult0: no visible global function
     definition for ‘specpool’
    ensemble.accepted.categories: no visible global function definition for
     ‘file_ext’
    ensemble.accepted.categories: no visible global function definition for
     ‘freq’
    ensemble.accepted.categories: no visible global function definition for
     ‘subs’
    ensemble.batch: no visible global function definition for ‘nlayers’
    ensemble.batch: no visible global function definition for
     ‘randomPoints’
    ensemble.category.simplify: no visible global function definition for
     ‘randomPoints’
    ensemble.category.simplify: no visible global function definition for
     ‘prepareData’
    ensemble.category.simplify: no visible global function definition for
     ‘freq’
    ensemble.category.simplify: no visible global function definition for
     ‘subs’
    ensemble.drop1: no visible global function definition for ‘dropLayer’
    ensemble.drop1 : loglik.calculation: no visible global function
     definition for ‘calc.deviance’
    ensemble.dummy.variables: no visible global function definition for
     ‘freq’
    ensemble.dummy.variables: no visible global function definition for
     ‘filename’
    ensemble.dummy.variables: no visible global function definition for
     ‘file_ext’
    ensemble.dummy.variables: no visible global function definition for
     ‘writeRaster’
    ensemble.habitat.change: no visible global function definition for
     ‘raster’
    ensemble.habitat.change: no visible global function definition for
     ‘setMinMax’
    ensemble.habitat.change: no visible global function definition for
     ‘maxValue’
    ensemble.habitat.change: no visible global function definition for
     ‘freq’
    ensemble.habitat.change: no visible global function definition for
     ‘overlay’
    ensemble.habitat.change: no visible global function definition for
     ‘writeRaster’
    ensemble.habitat.change: no visible global function definition for
     ‘KML’
    ensemble.mean: no visible global function definition for ‘setMinMax’
    ensemble.mean: no visible global function definition for ‘writeRaster’
    ensemble.mean: no visible global function definition for ‘raster’
    ensemble.mean: no visible global function definition for ‘extract’
    ensemble.mean: no visible global function definition for ‘evaluate’
    ensemble.mean: no visible global function definition for ‘KML’
    ensemble.raster: no visible global function definition for ‘crop’
    ensemble.raster: no visible global function definition for ‘dropLayer’
    ensemble.raster: no visible global function definition for ‘nlayers’
    ensemble.raster: no visible global function definition for ‘setMinMax’
    ensemble.raster: no visible global function definition for ‘projection’
    ensemble.raster: no visible global function definition for
     ‘projection<-’
    ensemble.raster: no visible global function definition for
     ‘writeRaster’
    ensemble.raster: no visible global function definition for ‘extract’
    ensemble.raster: no visible global function definition for ‘NAvalue’
    ensemble.raster: no visible global function definition for ‘minValue’
    ensemble.raster: no visible global function definition for ‘maxValue’
    ensemble.raster: no visible global function definition for ‘KML’
    ensemble.raster: no visible global function definition for ‘raster’
    ensemble.simplified.categories: no visible global function definition
     for ‘file_ext’
    ensemble.simplified.categories: no visible global function definition
     for ‘randomPoints’
    ensemble.simplified.categories: no visible global function definition
     for ‘prepareData’
    ensemble.simplified.categories: no visible global function definition
     for ‘freq’
    ensemble.simplified.categories: no visible global function definition
     for ‘subs’
    ensemble.strategy: no visible global function definition for ‘evaluate’
    ensemble.test: no visible global function definition for ‘projection’
    ensemble.test: no visible global function definition for ‘projection<-’
    ensemble.test: no visible global function definition for ‘nlayers’
    ensemble.test: no visible global function definition for ‘crop’
    ensemble.test: no visible global function definition for ‘dropLayer’
    ensemble.test: no visible global function definition for ‘setMinMax’
    ensemble.test: no visible global function definition for ‘kfold’
    ensemble.test: no visible global function definition for ‘randomPoints’
    ensemble.test: no visible global function definition for ‘prepareData’
    ensemble.test: no visible global function definition for ‘freq’
    ensemble.test: no visible global function definition for
     ‘sampleStratified’
    ensemble.test: no visible global function definition for ‘xyFromCell’
    ensemble.test: no visible global function definition for ‘extract’
    ensemble.test: no visible global function definition for ‘vif’
    ensemble.test: no visible global function definition for ‘maxent’
    ensemble.test: no visible global function definition for
     ‘calc.deviance’
    ensemble.test: no visible global function definition for ‘evaluate’
    ensemble.test: no visible global function definition for ‘threshold’
    ensemble.test: no visible global function definition for ‘gbm’
    ensemble.test: no visible global function definition for ‘gbm.step’
    ensemble.test: no visible global function definition for ‘randomForest’
    ensemble.test: no visible global function definition for ‘stepAIC’
    ensemble.test: no visible global function definition for ‘gam’
    ensemble.test: no visible global function definition for ‘gam.control’
    ensemble.test: no visible global function definition for ‘step.gam’
    ensemble.test: no visible global function definition for ‘earth’
    ensemble.test: no visible global function definition for ‘rpart’
    ensemble.test: no visible global function definition for
     ‘rpart.control’
    ensemble.test: no visible global function definition for ‘nnet’
    ensemble.test: no visible global function definition for ‘fda’
    ensemble.test: no visible binding for global variable ‘mars’
    ensemble.test: no visible global function definition for ‘ksvm’
    ensemble.test: no visible global function definition for ‘svm’
    ensemble.test: no visible global function definition for ‘bioclim’
    ensemble.test: no visible global function definition for ‘domain’
    ensemble.test: no visible global function definition for ‘mahal’
    ensemble.test: no visible global function definition for ‘geoDist’
    ensemble.test.gbm: no visible global function definition for
     ‘projection’
    ensemble.test.gbm: no visible global function definition for
     ‘projection<-’
    ensemble.test.gbm: no visible global function definition for ‘nlayers’
    ensemble.test.gbm: no visible global function definition for ‘crop’
    ensemble.test.gbm: no visible global function definition for
     ‘dropLayer’
    ensemble.test.gbm: no visible global function definition for
     ‘setMinMax’
    ensemble.test.gbm: no visible global function definition for
     ‘randomPoints’
    ensemble.test.gbm: no visible global function definition for
     ‘prepareData’
    ensemble.test.gbm: no visible global function definition for ‘kfold’
    ensemble.test.nnet: no visible global function definition for
     ‘projection’
    ensemble.test.nnet: no visible global function definition for
     ‘projection<-’
    ensemble.test.nnet: no visible global function definition for ‘nlayers’
    ensemble.test.nnet: no visible global function definition for ‘crop’
    ensemble.test.nnet: no visible global function definition for
     ‘dropLayer’
    ensemble.test.nnet: no visible global function definition for
     ‘setMinMax’
    ensemble.test.nnet: no visible global function definition for
     ‘randomPoints’
    ensemble.test.nnet: no visible global function definition for
     ‘prepareData’
    ensemble.test.nnet: no visible global function definition for ‘kfold’
    ensemble.test.splits: no visible global function definition for
     ‘dropLayer’
    ensemble.test.splits: no visible global function definition for ‘kfold’
    ensemble.test.splits: no visible global function definition for
     ‘evaluate’
    evaluation.strip.data: no visible global function definition for ‘crop’
    evaluation.strip.data: no visible global function definition for
     ‘dropLayer’
    evaluation.strip.data: no visible global function definition for
     ‘nlayers’
    evaluation.strip.data: no visible global function definition for
     ‘setMinMax’
    evaluation.strip.data: no visible global function definition for
     ‘projection’
    evaluation.strip.data: no visible global function definition for
     ‘projection<-’
    evaluation.strip.data: no visible global function definition for ‘freq’
    evaluation.strip.data: no visible global function definition for
     ‘cellStats’
    evaluation.strip.data: no visible global function definition for
     ‘minValue’
    evaluation.strip.data: no visible global function definition for
     ‘maxValue’
    multiconstrained: no visible global function definition for ‘rda’
    multiconstrained: no visible global function definition for ‘cca’
    multiconstrained: no visible global function definition for ‘capscale’
    multiconstrained: no visible global function definition for ‘anova.cca’
    nested.anova.dbrda: no visible global function definition for ‘vegdist’
    nested.anova.dbrda: no visible global function definition for
     ‘capscale’
    nested.npmanova: no visible global function definition for ‘vegdist’
    nested.npmanova: no visible global function definition for ‘adonis’
    nnetrandom : nnet.1: no visible global function definition for ‘nnet’
    ordibubble: no visible global function definition for ‘scores’
    ordicluster2: no visible global function definition for ‘ordihull’
    ordicoeno: no visible global function definition for ‘scores’
    ordicoeno: no visible global function definition for ‘gam’
    ordiequilibriumcircle: no visible global function definition for
     ‘scores’
    ordihull.centroids: no visible global function definition for ‘scores’
    ordihull.centroids: no visible global function definition for ‘vegdist’
    ordinearest: no visible global function definition for ‘scores’
    ordispider.centroids: no visible global function definition for
     ‘scores’
    ordispider.centroids : ordispidercentres: no visible global function
     definition for ‘scores’
    ordispider.centroids: no visible global function definition for
     ‘vegdist’
    ordivector: no visible global function definition for ‘scores’
    radfitresult: no visible global function definition for ‘radfit’
    radfitresult: no visible global function definition for ‘fisherfit’
    radfitresult: no visible global function definition for ‘prestonfit’
    renyiaccumresult: no visible global function definition for
     ‘renyiaccum’
    renyiresult: no visible global function definition for ‘renyi’
    residualssurface: no visible global function definition for ‘surf.ls’
    residualssurface: no visible global function definition for ‘interp’
    spatialsample: no visible global function definition for ‘inout’
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86

Version: 2.4-4
Check: R code for possible problems
Result: NOTE
    CAPdiscrim : CAPresult: no visible global function definition for ‘lda’
    CAPdiscrim: no visible global function definition for ‘vegdist’
    NMSrandom: no visible global function definition for ‘isoMDS’
    NMSrandom: no visible global function definition for ‘initMDS’
    NMSrandom: no visible global function definition for ‘sammon’
    accumresult: no visible global function definition for ‘specaccum’
    add.spec.scores: no visible global function definition for ‘scores’
    add.spec.scores: no visible global function definition for ‘wascores’
    caprescale: no visible global function definition for ‘scores’
    caprescale: no visible global function definition for ‘vegdist’
    check.ordiscores: no visible global function definition for ‘scores’
    climate.analogues: no visible global function definition for
     ‘setMinMax’
    climate.analogues: no visible global function definition for
     ‘writeRaster’
    climate.analogues: no visible global function definition for ‘freq’
    climate.analogues: no visible global function definition for ‘minValue’
    climate.analogues: no visible global function definition for ‘KML’
    climate.analogues: no visible global function definition for
     ‘xyFromCell’
    climate.analogues: no visible global function definition for ‘extract’
    climsurface: no visible global function definition for ‘nlayers’
    dist.eval: no visible global function definition for ‘vegdist’
    dist.eval: no visible global function definition for ‘no.shared’
    dist.eval: no visible global function definition for ‘distconnected’
    distdisplayed: no visible global function definition for ‘vegdist’
    distdisplayed: no visible global function definition for ‘scores’
    distdisplayed: no visible global function definition for ‘mantel’
    disttransform: no visible global function definition for ‘decostand’
    diversityresult : diversityresult0: no visible global function
     definition for ‘diversity’
    diversityresult : diversityresult0: no visible global function
     definition for ‘fisher.alpha’
    diversityresult : diversityresult0: no visible global function
     definition for ‘specpool’
    ensemble.accepted.categories: no visible global function definition for
     ‘file_ext’
    ensemble.accepted.categories: no visible global function definition for
     ‘freq’
    ensemble.accepted.categories: no visible global function definition for
     ‘subs’
    ensemble.batch: no visible global function definition for ‘nlayers’
    ensemble.batch: no visible global function definition for
     ‘randomPoints’
    ensemble.category.simplify: no visible global function definition for
     ‘randomPoints’
    ensemble.category.simplify: no visible global function definition for
     ‘prepareData’
    ensemble.category.simplify: no visible global function definition for
     ‘freq’
    ensemble.category.simplify: no visible global function definition for
     ‘subs’
    ensemble.drop1: no visible global function definition for ‘dropLayer’
    ensemble.drop1 : loglik.calculation: no visible global function
     definition for ‘calc.deviance’
    ensemble.dummy.variables: no visible global function definition for
     ‘freq’
    ensemble.dummy.variables: no visible global function definition for
     ‘filename’
    ensemble.dummy.variables: no visible global function definition for
     ‘file_ext’
    ensemble.dummy.variables: no visible global function definition for
     ‘writeRaster’
    ensemble.habitat.change: no visible global function definition for
     ‘raster’
    ensemble.habitat.change: no visible global function definition for
     ‘setMinMax’
    ensemble.habitat.change: no visible global function definition for
     ‘maxValue’
    ensemble.habitat.change: no visible global function definition for
     ‘freq’
    ensemble.habitat.change: no visible global function definition for
     ‘overlay’
    ensemble.habitat.change: no visible global function definition for
     ‘writeRaster’
    ensemble.habitat.change: no visible global function definition for
     ‘KML’
    ensemble.mean: no visible global function definition for ‘setMinMax’
    ensemble.mean: no visible global function definition for ‘writeRaster’
    ensemble.mean: no visible global function definition for ‘raster’
    ensemble.mean: no visible global function definition for ‘extract’
    ensemble.mean: no visible global function definition for ‘evaluate’
    ensemble.mean: no visible global function definition for ‘KML’
    ensemble.raster: no visible global function definition for ‘crop’
    ensemble.raster: no visible global function definition for ‘dropLayer’
    ensemble.raster: no visible global function definition for ‘nlayers’
    ensemble.raster: no visible global function definition for ‘setMinMax’
    ensemble.raster: no visible global function definition for ‘projection’
    ensemble.raster: no visible global function definition for
     ‘projection<-’
    ensemble.raster: no visible global function definition for
     ‘writeRaster’
    ensemble.raster: no visible global function definition for ‘extract’
    ensemble.raster: no visible global function definition for ‘NAvalue’
    ensemble.raster: no visible global function definition for ‘minValue’
    ensemble.raster: no visible global function definition for ‘maxValue’
    ensemble.raster: no visible global function definition for ‘KML’
    ensemble.raster: no visible global function definition for ‘raster’
    ensemble.simplified.categories: no visible global function definition
     for ‘file_ext’
    ensemble.simplified.categories: no visible global function definition
     for ‘randomPoints’
    ensemble.simplified.categories: no visible global function definition
     for ‘prepareData’
    ensemble.simplified.categories: no visible global function definition
     for ‘freq’
    ensemble.simplified.categories: no visible global function definition
     for ‘subs’
    ensemble.strategy: no visible global function definition for ‘evaluate’
    ensemble.test: no visible global function definition for ‘projection’
    ensemble.test: no visible global function definition for ‘projection<-’
    ensemble.test: no visible global function definition for ‘nlayers’
    ensemble.test: no visible global function definition for ‘crop’
    ensemble.test: no visible global function definition for ‘dropLayer’
    ensemble.test: no visible global function definition for ‘setMinMax’
    ensemble.test: no visible global function definition for ‘kfold’
    ensemble.test: no visible global function definition for ‘randomPoints’
    ensemble.test: no visible global function definition for ‘prepareData’
    ensemble.test: no visible global function definition for ‘freq’
    ensemble.test: no visible global function definition for
     ‘sampleStratified’
    ensemble.test: no visible global function definition for ‘xyFromCell’
    ensemble.test: no visible global function definition for ‘extract’
    ensemble.test: no visible global function definition for ‘vif’
    ensemble.test: no visible global function definition for ‘maxent’
    ensemble.test: no visible global function definition for
     ‘calc.deviance’
    ensemble.test: no visible global function definition for ‘evaluate’
    ensemble.test: no visible global function definition for ‘threshold’
    ensemble.test: no visible global function definition for ‘gbm’
    ensemble.test: no visible global function definition for ‘gbm.step’
    ensemble.test: no visible global function definition for ‘randomForest’
    ensemble.test: no visible global function definition for ‘stepAIC’
    ensemble.test: no visible global function definition for ‘gam’
    ensemble.test: no visible global function definition for ‘gam.control’
    ensemble.test: no visible global function definition for ‘step.gam’
    ensemble.test: no visible global function definition for ‘earth’
    ensemble.test: no visible global function definition for ‘rpart’
    ensemble.test: no visible global function definition for
     ‘rpart.control’
    ensemble.test: no visible global function definition for ‘nnet’
    ensemble.test: no visible global function definition for ‘fda’
    ensemble.test: no visible binding for global variable ‘mars’
    ensemble.test: no visible global function definition for ‘ksvm’
    ensemble.test: no visible global function definition for ‘svm’
    ensemble.test: no visible global function definition for ‘bioclim’
    ensemble.test: no visible global function definition for ‘domain’
    ensemble.test: no visible global function definition for ‘mahal’
    ensemble.test: no visible global function definition for ‘geoDist’
    ensemble.test.gbm: no visible global function definition for
     ‘projection’
    ensemble.test.gbm: no visible global function definition for
     ‘projection<-’
    ensemble.test.gbm: no visible global function definition for ‘nlayers’
    ensemble.test.gbm: no visible global function definition for ‘crop’
    ensemble.test.gbm: no visible global function definition for
     ‘dropLayer’
    ensemble.test.gbm: no visible global function definition for
     ‘setMinMax’
    ensemble.test.gbm: no visible global function definition for
     ‘randomPoints’
    ensemble.test.gbm: no visible global function definition for
     ‘prepareData’
    ensemble.test.gbm: no visible global function definition for ‘kfold’
    ensemble.test.nnet: no visible global function definition for
     ‘projection’
    ensemble.test.nnet: no visible global function definition for
     ‘projection<-’
    ensemble.test.nnet: no visible global function definition for ‘nlayers’
    ensemble.test.nnet: no visible global function definition for ‘crop’
    ensemble.test.nnet: no visible global function definition for
     ‘dropLayer’
    ensemble.test.nnet: no visible global function definition for
     ‘setMinMax’
    ensemble.test.nnet: no visible global function definition for
     ‘randomPoints’
    ensemble.test.nnet: no visible global function definition for
     ‘prepareData’
    ensemble.test.nnet: no visible global function definition for ‘kfold’
    ensemble.test.splits: no visible global function definition for
     ‘dropLayer’
    ensemble.test.splits: no visible global function definition for ‘kfold’
    ensemble.test.splits: no visible global function definition for
     ‘evaluate’
    evaluation.strip.data: no visible global function definition for ‘crop’
    evaluation.strip.data: no visible global function definition for
     ‘dropLayer’
    evaluation.strip.data: no visible global function definition for
     ‘nlayers’
    evaluation.strip.data: no visible global function definition for
     ‘setMinMax’
    evaluation.strip.data: no visible global function definition for
     ‘projection’
    evaluation.strip.data: no visible global function definition for
     ‘projection<-’
    evaluation.strip.data: no visible global function definition for ‘freq’
    evaluation.strip.data: no visible global function definition for
     ‘cellStats’
    evaluation.strip.data: no visible global function definition for
     ‘minValue’
    evaluation.strip.data: no visible global function definition for
     ‘maxValue’
    multiconstrained: no visible global function definition for ‘rda’
    multiconstrained: no visible global function definition for ‘cca’
    multiconstrained: no visible global function definition for ‘capscale’
    multiconstrained: no visible global function definition for ‘anova.cca’
    nested.anova.dbrda: no visible global function definition for ‘vegdist’
    nested.anova.dbrda: no visible global function definition for
     ‘capscale’
    nested.npmanova: no visible global function definition for ‘vegdist’
    nested.npmanova: no visible global function definition for ‘adonis’
    nnetrandom : nnet.1: no visible global function definition for ‘nnet’
    ordibubble: no visible global function definition for ‘scores’
    ordicluster2: no visible global function definition for ‘ordihull’
    ordicoeno: no visible global function definition for ‘scores’
    ordicoeno: no visible global function definition for ‘gam’
    ordiequilibriumcircle: no visible global function definition for
     ‘scores’
    ordihull.centroids: no visible global function definition for ‘scores’
    ordihull.centroids: no visible global function definition for ‘vegdist’
    ordinearest: no visible global function definition for ‘scores’
    ordispider.centroids: no visible global function definition for
     ‘scores’
    ordispider.centroids : ordispidercentres: no visible global function
     definition for ‘scores’
    ordispider.centroids: no visible global function definition for
     ‘vegdist’
    ordivector: no visible global function definition for ‘scores’
    radfitresult: no visible global function definition for ‘radfit’
    radfitresult: no visible global function definition for ‘fisherfit’
    radfitresult: no visible global function definition for ‘prestonfit’
    renyiaccumresult: no visible global function definition for
     ‘renyiaccum’
    renyiresult: no visible global function definition for ‘renyi’
    residualssurface: no visible global function definition for ‘surf.ls’
    residualssurface: no visible global function definition for ‘interp’
    spatialsample: no visible global function definition for ‘inout’
    climsurface,data.frame-RasterStack-RasterStack: no visible global
     function definition for ‘nlayers’
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang

Version: 2.4-4
Check: R code for possible problems
Result: NOTE
    CAPdiscrim : CAPresult: no visible global function definition for 'lda'
    CAPdiscrim: no visible global function definition for 'vegdist'
    NMSrandom: no visible global function definition for 'isoMDS'
    NMSrandom: no visible global function definition for 'initMDS'
    NMSrandom: no visible global function definition for 'sammon'
    accumresult: no visible global function definition for 'specaccum'
    add.spec.scores: no visible global function definition for 'scores'
    add.spec.scores: no visible global function definition for 'wascores'
    caprescale: no visible global function definition for 'scores'
    caprescale: no visible global function definition for 'vegdist'
    check.ordiscores: no visible global function definition for 'scores'
    climate.analogues: no visible global function definition for
     'setMinMax'
    climate.analogues: no visible global function definition for
     'writeRaster'
    climate.analogues: no visible global function definition for 'freq'
    climate.analogues: no visible global function definition for 'minValue'
    climate.analogues: no visible global function definition for 'KML'
    climate.analogues: no visible global function definition for
     'xyFromCell'
    climate.analogues: no visible global function definition for 'extract'
    climsurface: no visible global function definition for 'nlayers'
    dist.eval: no visible global function definition for 'vegdist'
    dist.eval: no visible global function definition for 'no.shared'
    dist.eval: no visible global function definition for 'distconnected'
    distdisplayed: no visible global function definition for 'vegdist'
    distdisplayed: no visible global function definition for 'scores'
    distdisplayed: no visible global function definition for 'mantel'
    disttransform: no visible global function definition for 'decostand'
    diversityresult : diversityresult0: no visible global function
     definition for 'diversity'
    diversityresult : diversityresult0: no visible global function
     definition for 'fisher.alpha'
    diversityresult : diversityresult0: no visible global function
     definition for 'specpool'
    ensemble.accepted.categories: no visible global function definition for
     'file_ext'
    ensemble.accepted.categories: no visible global function definition for
     'freq'
    ensemble.accepted.categories: no visible global function definition for
     'subs'
    ensemble.batch: no visible global function definition for 'nlayers'
    ensemble.batch: no visible global function definition for
     'randomPoints'
    ensemble.category.simplify: no visible global function definition for
     'randomPoints'
    ensemble.category.simplify: no visible global function definition for
     'prepareData'
    ensemble.category.simplify: no visible global function definition for
     'freq'
    ensemble.category.simplify: no visible global function definition for
     'subs'
    ensemble.drop1: no visible global function definition for 'dropLayer'
    ensemble.drop1 : loglik.calculation: no visible global function
     definition for 'calc.deviance'
    ensemble.dummy.variables: no visible global function definition for
     'freq'
    ensemble.dummy.variables: no visible global function definition for
     'filename'
    ensemble.dummy.variables: no visible global function definition for
     'file_ext'
    ensemble.dummy.variables: no visible global function definition for
     'writeRaster'
    ensemble.habitat.change: no visible global function definition for
     'raster'
    ensemble.habitat.change: no visible global function definition for
     'setMinMax'
    ensemble.habitat.change: no visible global function definition for
     'maxValue'
    ensemble.habitat.change: no visible global function definition for
     'freq'
    ensemble.habitat.change: no visible global function definition for
     'overlay'
    ensemble.habitat.change: no visible global function definition for
     'writeRaster'
    ensemble.habitat.change: no visible global function definition for
     'KML'
    ensemble.mean: no visible global function definition for 'setMinMax'
    ensemble.mean: no visible global function definition for 'writeRaster'
    ensemble.mean: no visible global function definition for 'raster'
    ensemble.mean: no visible global function definition for 'extract'
    ensemble.mean: no visible global function definition for 'evaluate'
    ensemble.mean: no visible global function definition for 'KML'
    ensemble.raster: no visible global function definition for 'crop'
    ensemble.raster: no visible global function definition for 'dropLayer'
    ensemble.raster: no visible global function definition for 'nlayers'
    ensemble.raster: no visible global function definition for 'setMinMax'
    ensemble.raster: no visible global function definition for 'projection'
    ensemble.raster: no visible global function definition for
     'projection<-'
    ensemble.raster: no visible global function definition for
     'writeRaster'
    ensemble.raster: no visible global function definition for 'extract'
    ensemble.raster: no visible global function definition for 'NAvalue'
    ensemble.raster: no visible global function definition for 'minValue'
    ensemble.raster: no visible global function definition for 'maxValue'
    ensemble.raster: no visible global function definition for 'KML'
    ensemble.raster: no visible global function definition for 'raster'
    ensemble.simplified.categories: no visible global function definition
     for 'file_ext'
    ensemble.simplified.categories: no visible global function definition
     for 'randomPoints'
    ensemble.simplified.categories: no visible global function definition
     for 'prepareData'
    ensemble.simplified.categories: no visible global function definition
     for 'freq'
    ensemble.simplified.categories: no visible global function definition
     for 'subs'
    ensemble.strategy: no visible global function definition for 'evaluate'
    ensemble.test: no visible global function definition for 'projection'
    ensemble.test: no visible global function definition for 'projection<-'
    ensemble.test: no visible global function definition for 'nlayers'
    ensemble.test: no visible global function definition for 'crop'
    ensemble.test: no visible global function definition for 'dropLayer'
    ensemble.test: no visible global function definition for 'setMinMax'
    ensemble.test: no visible global function definition for 'kfold'
    ensemble.test: no visible global function definition for 'randomPoints'
    ensemble.test: no visible global function definition for 'prepareData'
    ensemble.test: no visible global function definition for 'freq'
    ensemble.test: no visible global function definition for
     'sampleStratified'
    ensemble.test: no visible global function definition for 'xyFromCell'
    ensemble.test: no visible global function definition for 'extract'
    ensemble.test: no visible global function definition for 'vif'
    ensemble.test: no visible global function definition for 'maxent'
    ensemble.test: no visible global function definition for
     'calc.deviance'
    ensemble.test: no visible global function definition for 'evaluate'
    ensemble.test: no visible global function definition for 'threshold'
    ensemble.test: no visible global function definition for 'gbm'
    ensemble.test: no visible global function definition for 'gbm.step'
    ensemble.test: no visible global function definition for 'randomForest'
    ensemble.test: no visible global function definition for 'stepAIC'
    ensemble.test: no visible global function definition for 'gam'
    ensemble.test: no visible global function definition for 'gam.control'
    ensemble.test: no visible global function definition for 'step.gam'
    ensemble.test: no visible global function definition for 'earth'
    ensemble.test: no visible global function definition for 'rpart'
    ensemble.test: no visible global function definition for
     'rpart.control'
    ensemble.test: no visible global function definition for 'nnet'
    ensemble.test: no visible global function definition for 'fda'
    ensemble.test: no visible binding for global variable 'mars'
    ensemble.test: no visible global function definition for 'ksvm'
    ensemble.test: no visible global function definition for 'svm'
    ensemble.test: no visible global function definition for 'bioclim'
    ensemble.test: no visible global function definition for 'domain'
    ensemble.test: no visible global function definition for 'mahal'
    ensemble.test: no visible global function definition for 'geoDist'
    ensemble.test.gbm: no visible global function definition for
     'projection'
    ensemble.test.gbm: no visible global function definition for
     'projection<-'
    ensemble.test.gbm: no visible global function definition for 'nlayers'
    ensemble.test.gbm: no visible global function definition for 'crop'
    ensemble.test.gbm: no visible global function definition for
     'dropLayer'
    ensemble.test.gbm: no visible global function definition for
     'setMinMax'
    ensemble.test.gbm: no visible global function definition for
     'randomPoints'
    ensemble.test.gbm: no visible global function definition for
     'prepareData'
    ensemble.test.gbm: no visible global function definition for 'kfold'
    ensemble.test.nnet: no visible global function definition for
     'projection'
    ensemble.test.nnet: no visible global function definition for
     'projection<-'
    ensemble.test.nnet: no visible global function definition for 'nlayers'
    ensemble.test.nnet: no visible global function definition for 'crop'
    ensemble.test.nnet: no visible global function definition for
     'dropLayer'
    ensemble.test.nnet: no visible global function definition for
     'setMinMax'
    ensemble.test.nnet: no visible global function definition for
     'randomPoints'
    ensemble.test.nnet: no visible global function definition for
     'prepareData'
    ensemble.test.nnet: no visible global function definition for 'kfold'
    ensemble.test.splits: no visible global function definition for
     'dropLayer'
    ensemble.test.splits: no visible global function definition for 'kfold'
    ensemble.test.splits: no visible global function definition for
     'evaluate'
    evaluation.strip.data: no visible global function definition for 'crop'
    evaluation.strip.data: no visible global function definition for
     'dropLayer'
    evaluation.strip.data: no visible global function definition for
     'nlayers'
    evaluation.strip.data: no visible global function definition for
     'setMinMax'
    evaluation.strip.data: no visible global function definition for
     'projection'
    evaluation.strip.data: no visible global function definition for
     'projection<-'
    evaluation.strip.data: no visible global function definition for 'freq'
    evaluation.strip.data: no visible global function definition for
     'cellStats'
    evaluation.strip.data: no visible global function definition for
     'minValue'
    evaluation.strip.data: no visible global function definition for
     'maxValue'
    import.from.Access: no visible global function definition for
     'odbcConnectAccess'
    import.from.Access: no visible global function definition for
     'sqlFetch'
    import.from.Access: no visible global function definition for
     'make.cepnames'
    import.from.Access2007: no visible global function definition for
     'odbcConnectAccess2007'
    import.from.Access2007: no visible global function definition for
     'sqlFetch'
    import.from.Access2007: no visible global function definition for
     'make.cepnames'
    import.from.Excel: no visible global function definition for
     'odbcConnectExcel'
    import.from.Excel: no visible global function definition for 'sqlFetch'
    import.from.Excel: no visible global function definition for
     'make.cepnames'
    import.from.Excel2007: no visible global function definition for
     'odbcConnectExcel2007'
    import.from.Excel2007: no visible global function definition for
     'sqlFetch'
    import.from.Excel2007: no visible global function definition for
     'make.cepnames'
    multiconstrained: no visible global function definition for 'rda'
    multiconstrained: no visible global function definition for 'cca'
    multiconstrained: no visible global function definition for 'capscale'
    multiconstrained: no visible global function definition for 'anova.cca'
    nested.anova.dbrda: no visible global function definition for 'vegdist'
    nested.anova.dbrda: no visible global function definition for
     'capscale'
    nested.npmanova: no visible global function definition for 'vegdist'
    nested.npmanova: no visible global function definition for 'adonis'
    nnetrandom : nnet.1: no visible global function definition for 'nnet'
    ordibubble: no visible global function definition for 'scores'
    ordicluster2: no visible global function definition for 'ordihull'
    ordicoeno: no visible global function definition for 'scores'
    ordicoeno: no visible global function definition for 'gam'
    ordiequilibriumcircle: no visible global function definition for
     'scores'
    ordihull.centroids: no visible global function definition for 'scores'
    ordihull.centroids: no visible global function definition for 'vegdist'
    ordinearest: no visible global function definition for 'scores'
    ordispider.centroids: no visible global function definition for
     'scores'
    ordispider.centroids : ordispidercentres: no visible global function
     definition for 'scores'
    ordispider.centroids: no visible global function definition for
     'vegdist'
    ordivector: no visible global function definition for 'scores'
    radfitresult: no visible global function definition for 'radfit'
    radfitresult: no visible global function definition for 'fisherfit'
    radfitresult: no visible global function definition for 'prestonfit'
    renyiaccumresult: no visible global function definition for
     'renyiaccum'
    renyiresult: no visible global function definition for 'renyi'
    residualssurface: no visible global function definition for 'surf.ls'
    residualssurface: no visible global function definition for 'interp'
    spatialsample: no visible global function definition for 'inout'
    climsurface,data.frame-RasterStack-RasterStack: no visible global
     function definition for 'nlayers'
Flavor: r-devel-windows-ix86+x86_64

Version: 2.4-4
Check: package dependencies
Result: ERROR
    Package required but not available: ‘Rcmdr’
    
    See the information on DESCRIPTION files in the chapter ‘Creating R
    packages’ of the ‘Writing R Extensions’ manual.
Flavor: r-release-linux-ix86

Version: 2.4-4
Check: package dependencies
Result: NOTE
    Packages suggested but not available for checking: ‘RODBC’ ‘rgdal’
Flavor: r-release-osx-x86_64-mavericks