CRAN Package Check Results for Package BoolNet

Last updated on 2017-09-24 11:48:00.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 2.1.3 15.92 122.31 138.24 NOTE
r-devel-linux-x86_64-debian-gcc 2.1.3 17.27 118.43 135.69 NOTE
r-devel-linux-x86_64-fedora-clang 2.1.3 249.68 NOTE
r-devel-linux-x86_64-fedora-gcc 2.1.3 247.38 NOTE
r-devel-windows-ix86+x86_64 2.1.3 45.00 216.00 261.00 OK
r-patched-linux-x86_64 2.1.3 17.71 119.82 137.53 NOTE
r-patched-solaris-x86 2.1.3 124.90 WARN
r-release-linux-x86_64 2.1.3 17.89 116.40 134.29 NOTE
r-release-windows-ix86+x86_64 2.1.3 47.00 231.00 278.00 OK
r-release-osx-x86_64 2.1.3 NOTE
r-oldrel-windows-ix86+x86_64 2.1.3 50.00 201.00 251.00 OK
r-oldrel-osx-x86_64 2.1.3 OK

Additional issues

rchk

Check Details

Version: 2.1.3
Check: compiled code
Result: NOTE
    File ‘BoolNet/libs/BoolNet.so’:
     Found no calls to: ‘R_registerRoutines’, ‘R_useDynamicSymbols’
    
    It is good practice to register native routines and to disable symbol
    search.
    
    See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-release-linux-x86_64

Version: 2.1.3
Check: re-building of vignette outputs
Result: WARN
    Error in re-building vignettes:
     ...
    
    Error: processing vignette 'BoolNet_package_vignette.Snw' failed with diagnostics:
     chunk 13
    Error in (function (interaction, index, gene) :
     No values for the "don't care" entries were specified for gene "Fkh2"!
    Execution halted
Flavor: r-patched-solaris-x86

Version: 2.1.3
Check: re-building of vignette outputs
Result: NOTE
    Error in re-building vignettes:
     ...
    Warning in structure(x$children, class = "XMLNodeList") :
     Calling 'structure(NULL, *)' is deprecated, as NULL cannot have attributes.
     Consider 'structure(list(), *)' instead.
    Warning in structure(x$children, class = "XMLNodeList") :
     Calling 'structure(NULL, *)' is deprecated, as NULL cannot have attributes.
     Consider 'structure(list(), *)' instead.
    Warning in structure(x$children, class = "XMLNodeList") :
     Calling 'structure(NULL, *)' is deprecated, as NULL cannot have attributes.
     Consider 'structure(list(), *)' instead.
    Error in texi2dvi(file = file, pdf = TRUE, clean = clean, quiet = quiet, :
     Running 'texi2dvi' on 'BoolNet_package_vignette.tex' failed.
    LaTeX errors:
    ! LaTeX Error: File `a4wide.sty' not found.
    
    Type X to quit or <RETURN> to proceed,
    or enter new name. (Default extension: sty)
    
    ! Emergency stop.
    <read *>
    
    l.7 ^^M
    
    ! ==> Fatal error occurred, no output PDF file produced!
    Calls: buildVignettes -> texi2pdf -> texi2dvi
    Execution halted
Flavor: r-release-osx-x86_64