CRAN Package Check Results for Package COBRA

Last updated on 2017-09-19 19:46:17.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.99.4 0.89 17.84 18.73 NOTE
r-devel-linux-x86_64-debian-gcc 0.99.4 0.92 16.88 17.80 NOTE
r-devel-linux-x86_64-fedora-clang 0.99.4 32.38 NOTE
r-devel-linux-x86_64-fedora-gcc 0.99.4 30.06 NOTE
r-devel-windows-ix86+x86_64 0.99.4 6.00 64.00 70.00 NOTE
r-patched-linux-x86_64 0.99.4 0.92 16.43 17.35 NOTE
r-patched-solaris-x86 0.99.4 47.20 NOTE
r-release-linux-x86_64 0.99.4 0.91 16.56 17.47 NOTE
r-release-windows-ix86+x86_64 0.99.4 4.00 50.00 54.00 NOTE
r-release-osx-x86_64 0.99.4 NOTE
r-oldrel-windows-ix86+x86_64 0.99.4 4.00 43.00 47.00 NOTE
r-oldrel-osx-x86_64 0.99.4 NOTE

Check Details

Version: 0.99.4
Check: dependencies in R code
Result: NOTE
    'library' or 'require' calls in package code:
     ‘lars’ ‘randomForest’ ‘ridge’ ‘snowfall’ ‘tree’
     Please use :: or requireNamespace() instead.
     See section 'Suggested packages' in the 'Writing R Extensions' manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-windows-ix86+x86_64, r-release-osx-x86_64, r-oldrel-windows-ix86+x86_64, r-oldrel-osx-x86_64

Version: 0.99.4
Check: R code for possible problems
Result: NOTE
    COBRA : COBRA.lars: no visible global function definition for ‘lars’
    COBRA : COBRA.lars: no visible global function definition for
     ‘predict.lars’
    COBRA : COBRA.tree: no visible global function definition for ‘tree’
    COBRA : COBRA.tree: no visible global function definition for
     ‘as.formula’
    COBRA : COBRA.tree: no visible global function definition for ‘predict’
    COBRA : COBRA.ridge: no visible global function definition for
     ‘linearRidge’
    COBRA : COBRA.ridge: no visible global function definition for
     ‘as.formula’
    COBRA : COBRA.ridge: no visible global function definition for
     ‘predict’
    COBRA : COBRA.randomForest: no visible global function definition for
     ‘randomForest’
    COBRA : COBRA.randomForest: no visible global function definition for
     ‘predict’
    COBRA: no visible global function definition for ‘sfInit’
    COBRA: no visible global function definition for ‘sfLibrary’
    COBRA: no visible global function definition for ‘sfExportAll’
    COBRA: no visible global function definition for ‘sfSapply’
    COBRA: no visible global function definition for ‘sfStop’
    COBRA: no visible global function definition for ‘write.table’
    COBRA: no visible global function definition for ‘pdf’
    COBRA: no visible global function definition for ‘plot’
    COBRA: no visible global function definition for ‘points’
    COBRA: no visible global function definition for ‘legend’
    COBRA: no visible global function definition for ‘abline’
    COBRA: no visible global function definition for ‘lines’
    COBRA: no visible global function definition for ‘dev.off’
    COBRA: no visible global function definition for ‘dev.new’
    Undefined global functions or variables:
     abline as.formula dev.new dev.off lars legend linearRidge lines pdf
     plot points predict predict.lars randomForest sfExportAll sfInit
     sfLibrary sfSapply sfStop tree write.table
    Consider adding
     importFrom("grDevices", "dev.new", "dev.off", "pdf")
     importFrom("graphics", "abline", "legend", "lines", "plot", "points")
     importFrom("stats", "as.formula", "predict")
     importFrom("utils", "write.table")
    to your NAMESPACE file.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-windows-ix86+x86_64, r-release-osx-x86_64, r-oldrel-windows-ix86+x86_64, r-oldrel-osx-x86_64

Version: 0.99.4
Check: compiled code
Result: NOTE
    File ‘COBRA/libs/COBRA.so’:
     Found no calls to: ‘R_registerRoutines’, ‘R_useDynamicSymbols’
    
    It is good practice to register native routines and to disable symbol
    search.
    
    See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-release-linux-x86_64

Version: 0.99.4
Check: package dependencies
Result: NOTE
    Package suggested but not available for checking: ‘ridge’
Flavor: r-release-osx-x86_64