CRAN Package Check Results for Package Causata

Last updated on 2016-12-04 12:47:35.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 4.2-0 5.26 154.40 159.66 WARN
r-devel-linux-x86_64-debian-gcc 4.2-0 5.56 150.43 156.00 WARN
r-devel-linux-x86_64-fedora-clang 4.2-0 344.42 WARN --no-stop-on-test-error
r-devel-linux-x86_64-fedora-gcc 4.2-0 338.91 WARN
r-devel-macos-x86_64-clang 4.2-0 253.31 WARN --no-stop-on-test-error
r-devel-windows-ix86+x86_64 4.2-0 13.00 234.00 247.00 WARN
r-patched-linux-x86_64 4.2-0 4.86 133.21 138.06 NOTE
r-release-linux-x86_64 4.2-0 4.80 134.09 138.89 NOTE
r-release-osx-x86_64-mavericks 4.2-0 NOTE
r-release-windows-ix86+x86_64 4.2-0 19.00 242.00 261.00 NOTE

Check Details

Version: 4.2-0
Check: DESCRIPTION meta-information
Result: NOTE
    Malformed Title field: should not end in a period.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-windows-ix86+x86_64

Version: 4.2-0
Check: top-level files
Result: NOTE
    Non-standard file/directory found at top level:
     ‘integration_tests’
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-release-linux-x86_64

Version: 4.2-0
Check: R code for possible problems
Result: NOTE
    BinaryCut: no visible global function definition for ‘quantile’
    CleanNaFromContinuousFunction: no visible global function definition
     for ‘median’
    CleanNaFromContinuousFunction: no visible global function definition
     for ‘na.omit’
    GetMetadata.Connect: no visible global function definition for
     ‘dbGetQuery’
    GetRawData.Connect: no visible global function definition for
     ‘dbGetQuery’
    Linearity: no visible global function definition for ‘median’
    PredictivePowerCv: no visible global function definition for ‘sd’
    ReadCausataCsv: no visible global function definition for ‘read.csv’
    ToPmml.GlmnetModelDefinition: no visible global function definition for
     ‘coef’
    ToPmml.GlmnetModelDefinition: no visible global function definition for
     ‘terms.formula’
    ValidateModel: no visible global function definition for ‘predict’
    predict.GlmnetModelDefinition: no visible global function definition
     for ‘model.matrix’
    predict.GlmnetModelDefinition: no visible binding for global variable
     ‘contrasts’
    predict.GlmnetModelDefinition: no visible global function definition
     for ‘predict’
    Undefined global functions or variables:
     coef contrasts dbGetQuery median model.matrix na.omit predict
     quantile read.csv sd terms.formula
    Consider adding
     importFrom("stats", "coef", "contrasts", "median", "model.matrix",
     "na.omit", "predict", "quantile", "sd", "terms.formula")
     importFrom("utils", "read.csv")
    to your NAMESPACE file.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-windows-ix86+x86_64

Version: 4.2-0
Check: line endings in Makefiles
Result: NOTE
    Found the following Makefile(s) without a final LF:
     inst/doc/Makefile
    Some ‘make’ programs ignore lines not ending in LF.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-windows-ix86+x86_64

Version: 4.2-0
Check: files in ‘vignettes’
Result: WARN
    Files in the 'vignettes' directory newer than same file in 'inst/doc':
     ‘figure/glmnet-diagnostic.pdf’, ‘figure/roc-plot.pdf’
    The following files look like leftovers/mistakes:
     ‘Causata-vignette.log’
    Please remove them from your package.
    The following directory looks like a leftover from 'knitr':
     ‘figure’
    Please remove from your package.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64

Version: 4.2-0
Flags: --no-stop-on-test-error
Check: DESCRIPTION meta-information
Result: NOTE
    Malformed Title field: should not end in a period.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-macos-x86_64-clang

Version: 4.2-0
Flags: --no-stop-on-test-error
Check: top-level files
Result: NOTE
    Non-standard file/directory found at top level:
     ‘integration_tests’
Flavor: r-devel-linux-x86_64-fedora-clang

Version: 4.2-0
Flags: --no-stop-on-test-error
Check: R code for possible problems
Result: NOTE
    BinaryCut: no visible global function definition for ‘quantile’
    CleanNaFromContinuousFunction: no visible global function definition
     for ‘median’
    CleanNaFromContinuousFunction: no visible global function definition
     for ‘na.omit’
    GetMetadata.Connect: no visible global function definition for
     ‘dbGetQuery’
    GetRawData.Connect: no visible global function definition for
     ‘dbGetQuery’
    Linearity: no visible global function definition for ‘median’
    PredictivePowerCv: no visible global function definition for ‘sd’
    ReadCausataCsv: no visible global function definition for ‘read.csv’
    ToPmml.GlmnetModelDefinition: no visible global function definition for
     ‘coef’
    ToPmml.GlmnetModelDefinition: no visible global function definition for
     ‘terms.formula’
    ValidateModel: no visible global function definition for ‘predict’
    predict.GlmnetModelDefinition: no visible global function definition
     for ‘model.matrix’
    predict.GlmnetModelDefinition: no visible binding for global variable
     ‘contrasts’
    predict.GlmnetModelDefinition: no visible global function definition
     for ‘predict’
    Undefined global functions or variables:
     coef contrasts dbGetQuery median model.matrix na.omit predict
     quantile read.csv sd terms.formula
    Consider adding
     importFrom("stats", "coef", "contrasts", "median", "model.matrix",
     "na.omit", "predict", "quantile", "sd", "terms.formula")
     importFrom("utils", "read.csv")
    to your NAMESPACE file.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-macos-x86_64-clang

Version: 4.2-0
Flags: --no-stop-on-test-error
Check: line endings in Makefiles
Result: NOTE
    Found the following Makefile(s) without a final LF:
     inst/doc/Makefile
    Some ‘make’ programs ignore lines not ending in LF.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-macos-x86_64-clang

Version: 4.2-0
Flags: --no-stop-on-test-error
Check: files in ‘vignettes’
Result: WARN
    Files in the 'vignettes' directory newer than same file in 'inst/doc':
     ‘figure/glmnet-diagnostic.pdf’, ‘figure/roc-plot.pdf’
    The following files look like leftovers/mistakes:
     ‘Causata-vignette.log’
    Please remove them from your package.
    The following directory looks like a leftover from 'knitr':
     ‘figure’
    Please remove from your package.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-macos-x86_64-clang

Version: 4.2-0
Check: package dependencies
Result: NOTE
    Package suggested but not available for checking: 'doMC'
Flavors: r-devel-windows-ix86+x86_64, r-release-windows-ix86+x86_64

Version: 4.2-0
Check: files in ‘vignettes’
Result: NOTE
    The following files look like leftovers/mistakes:
     ‘Causata-vignette.log’
    Please remove them from your package.
    The following directory looks like a leftover from 'knitr':
     ‘figure’
    Please remove from your package.
Flavors: r-patched-linux-x86_64, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-windows-ix86+x86_64