CRAN Package Check Results for Package ChemoSpec

Last updated on 2015-04-01 08:50:00.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 4.0.1 3.62 60.44 64.06 OK
r-devel-linux-x86_64-debian-gcc 4.0.1 3.49 58.79 62.28 OK
r-devel-linux-x86_64-fedora-clang 4.0.1 124.86 OK
r-devel-linux-x86_64-fedora-gcc 4.0.1 118.49 OK
r-devel-osx-x86_64-clang 4.0.1 116.09 OK
r-prerel-windows-ix86+x86_64 4.0.1 11.00 88.00 99.00 OK
r-prerel-linux-x86_64 4.0.1 3.73 58.80 62.53 OK
r-prerel-solaris-sparc 4.0.1 658.00 NOTE --no-build-vignettes
r-prerel-solaris-x86 4.0.1 153.50 NOTE
r-release-linux-x86_64 4.0.1 4.29 68.78 73.08 OK
r-release-osx-x86_64-mavericks 4.0.1 ERROR
r-release-osx-x86_64-snowleopard 4.0.1 ERROR
r-release-windows-ix86+x86_64 4.0.1 12.00 99.00 111.00 OK
r-oldrel-windows-ix86+x86_64 4.0-0 25.00 129.00 154.00 ERROR

Check Details

Version: 4.0.1
Flags: --no-build-vignettes
Check: package dependencies
Result: NOTE
    Package suggested but not available for checking: ‘js’
Flavor: r-prerel-solaris-sparc

Version: 4.0.1
Check: package dependencies
Result: NOTE
    Package suggested but not available for checking: ‘js’
Flavor: r-prerel-solaris-x86

Version: 4.0.1
Check: package dependencies
Result: NOTE
    Package suggested but not available for checking: ‘speaq’
Flavors: r-release-osx-x86_64-mavericks, r-release-osx-x86_64-snowleopard

Version: 4.0.1
Check: examples
Result: ERROR
    Running examples in ‘ChemoSpec-Ex.R’ failed
    The error most likely occurred in:
    
    > ### Name: clupaSpectra
    > ### Title: Conduct Hierarchical Cluster-Based Peak Alignment on a Spectra
    > ### Object
    > ### Aliases: clupaSpectra
    > ### Keywords: utilities
    >
    > ### ** Examples
    >
    > data(alignMUD)
    > plotSpectra(alignMUD, which = 1:20, lab.pos = 4.5, offset = 0.1,
    + yrange = c(0, 1900), amp = 500, xlim = c(1.5, 1.8),
    + main = "Misaligned NMR Spectra (alignMUD)")
    > aMUD <- clupaSpectra(alignMUD)
    Error in clupaSpectra(alignMUD) :
     You need to install package speaq to use this function
    Execution halted
Flavors: r-release-osx-x86_64-mavericks, r-release-osx-x86_64-snowleopard

Version: 4.0-0
Check: examples
Result: ERROR
    Running examples in 'ChemoSpec-Ex.R' failed
    The error most likely occurred in:
    
    > ### Name: clupaSpectra
    > ### Title: Conduct Hierarchical Cluster-Based Peak Alignment on a Spectra
    > ### Object
    > ### Aliases: clupaSpectra
    > ### Keywords: utilities
    >
    > ### ** Examples
    >
    > data(alignMUD)
    > plotSpectra(alignMUD, which = 1:20, lab.pos = 4.5, offset = 0.1,
    + yrange = c(0, 1900), amp = 500, xlim = c(1.5, 1.8),
    + main = "Misaligned NMR Spectra (alignMUD)")
    > aMUD <- clupaSpectra(alignMUD)
    
     Spectrum 1 has 4 peaks
     Spectrum 2 has 4 peaks
     Spectrum 3 has 4 peaks
     Spectrum 4 has 4 peaks
     Spectrum 5 has 4 peaks
     Spectrum 6 has 4 peaks
     Spectrum 7 has 4 peaks
     Spectrum 8 has 4 peaks
     Spectrum 9 has 4 peaks
     Spectrum 10 has 4 peaks
     Spectrum 11 has 4 peaks
     Spectrum 12 has 4 peaks
     Spectrum 13 has 4 peaks
     Spectrum 14 has 4 peaks
     Spectrum 15 has 4 peaks
     Spectrum 16 has 4 peaks
     Spectrum 17 has 4 peaks
     Spectrum 18 has 4 peaks
     Spectrum 19 has 4 peaks
     Spectrum 20 has 4 peaks
     aligning spectrum 1Error in findShiftStepFFT(refSpec[startCheckP:endCheckP], tarSpec[startCheckP:endCheckP], :
     could not find function "anyNA"
    Calls: clupaSpectra -> dohCluster -> hClustAlign -> findShiftStepFFT
    Execution halted
Flavor: r-oldrel-windows-ix86+x86_64