CRAN Package Check Results for Package ChemoSpec

Last updated on 2016-04-30 03:51:06.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-gcc 4.3.17 3.44 48.23 51.67 OK
r-devel-linux-x86_64-fedora-clang 4.3.17 94.85 OK
r-devel-linux-x86_64-fedora-gcc 4.3.17 91.11 OK
r-devel-osx-x86_64-clang 4.3.17 100.09 OK
r-devel-windows-ix86+x86_64 4.3.17 9.00 91.00 100.00 OK
r-patched-linux-x86_64 4.3.17 3.27 47.89 51.16 OK
r-patched-solaris-sparc 4.3.17 463.00 NOTE --no-build-vignettes
r-patched-solaris-x86 4.3.17 118.40 OK
r-release-linux-x86_64 4.3.17 3.60 51.66 55.26 OK
r-release-osx-x86_64-mavericks 4.3.17 ERROR
r-release-windows-ix86+x86_64 4.3.17 9.00 85.00 94.00 OK
r-oldrel-windows-ix86+x86_64 4.3.17 14.00 127.00 141.00 OK

Check Details

Version: 4.3.17
Flags: --no-build-vignettes
Check: package dependencies
Result: NOTE
    Package suggested but not available for checking: ‘js’
Flavor: r-patched-solaris-sparc

Version: 4.3.17
Check: package dependencies
Result: NOTE
    Package suggested but not available for checking: ‘speaq’
Flavor: r-release-osx-x86_64-mavericks

Version: 4.3.17
Check: whether package can be installed
Result: WARN
    Found the following significant warnings:
     Warning: 'rgl_init' failed, running with rgl.useNULL = TRUE
Flavor: r-release-osx-x86_64-mavericks

Version: 4.3.17
Check: dependencies in R code
Result: NOTE
    Invalid MIT-MAGIC-COOKIE-1 key
Flavor: r-release-osx-x86_64-mavericks

Version: 4.3.17
Check: S3 generic/method consistency
Result: WARN
    Invalid MIT-MAGIC-COOKIE-1 key
    See section ‘Generic functions and methods’ in the ‘Writing R
    Extensions’ manual.
Flavor: r-release-osx-x86_64-mavericks

Version: 4.3.17
Check: replacement functions
Result: WARN
    Invalid MIT-MAGIC-COOKIE-1 key
    The argument of a replacement function which corresponds to the right
    hand side must be named ‘value’.
Flavor: r-release-osx-x86_64-mavericks

Version: 4.3.17
Check: foreign function calls
Result: NOTE
    Invalid MIT-MAGIC-COOKIE-1 key
    See chapter ‘System and foreign language interfaces’ in the ‘Writing R
    Extensions’ manual.
Flavor: r-release-osx-x86_64-mavericks

Version: 4.3.17
Check: R code for possible problems
Result: NOTE
    Invalid MIT-MAGIC-COOKIE-1 key
Flavor: r-release-osx-x86_64-mavericks

Version: 4.3.17
Check: for missing documentation entries
Result: WARN
    Invalid MIT-MAGIC-COOKIE-1 key
    All user-level objects in a package should have documentation entries.
    See chapter ‘Writing R documentation files’ in the ‘Writing R
    Extensions’ manual.
Flavor: r-release-osx-x86_64-mavericks

Version: 4.3.17
Check: for code/documentation mismatches
Result: WARN
    Invalid MIT-MAGIC-COOKIE-1 key
    Invalid MIT-MAGIC-COOKIE-1 key
    Invalid MIT-MAGIC-COOKIE-1 key
Flavor: r-release-osx-x86_64-mavericks

Version: 4.3.17
Check: Rd \usage sections
Result: NOTE
    Invalid MIT-MAGIC-COOKIE-1 key
    The \usage entries for S3 methods should use the \method markup and not
    their full name.
    See chapter ‘Writing R documentation files’ in the ‘Writing R
    Extensions’ manual.
Flavor: r-release-osx-x86_64-mavericks

Version: 4.3.17
Check: examples
Result: ERROR
    Running examples in ‘ChemoSpec-Ex.R’ failed
    The error most likely occurred in:
    
    > ### Name: clupaSpectra
    > ### Title: Conduct Hierarchical Cluster-Based Peak Alignment on a Spectra
    > ### Object
    > ### Aliases: clupaSpectra
    > ### Keywords: utilities
    >
    > ### ** Examples
    >
    > data(alignMUD)
    > plotSpectra(alignMUD, which = 1:20, lab.pos = 4.5, offset = 0.1,
    + yrange = c(0, 1900), amp = 500, xlim = c(1.5, 1.8),
    + main = "Misaligned NMR Spectra (alignMUD)")
    > aMUD <- clupaSpectra(alignMUD)
    Error in clupaSpectra(alignMUD) :
     You need to install package speaq to use this function
    Execution halted
Flavor: r-release-osx-x86_64-mavericks