CRAN Package Check Results for Package ChemoSpec

Last updated on 2017-04-28 17:47:26.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 4.4.17 3.60 64.73 68.34 OK
r-devel-linux-x86_64-debian-gcc 4.4.17 3.91 63.67 67.58 OK
r-devel-linux-x86_64-fedora-clang 4.4.17 122.87 OK --no-stop-on-test-error
r-devel-linux-x86_64-fedora-gcc 4.4.17 119.14 OK --no-stop-on-test-error
r-devel-windows-ix86+x86_64 4.4.17 8.00 155.00 163.00 OK
r-patched-linux-x86_64 4.4.17 3.62 62.56 66.18 OK
r-patched-solaris-sparc 4.4.17 565.10 NOTE --no-build-vignettes
r-patched-solaris-x86 4.4.17 146.60 OK
r-release-linux-x86_64 4.4.17 3.49 63.75 67.23 OK
r-release-windows-ix86+x86_64 4.4.17 12.00 154.00 166.00 OK
r-release-osx-x86_64 4.4.17 ERROR
r-oldrel-windows-ix86+x86_64 4.4.17 11.00 132.00 143.00 OK
r-oldrel-osx-x86_64 4.4.17 OK

Check Details

Version: 4.4.17
Flags: --no-build-vignettes
Check: package dependencies
Result: NOTE
    Package suggested but not available for checking: ‘js’
Flavor: r-patched-solaris-sparc

Version: 4.4.17
Check: package dependencies
Result: NOTE
    Package suggested but not available for checking: ‘speaq’
Flavor: r-release-osx-x86_64

Version: 4.4.17
Check: examples
Result: ERROR
    Running examples in ‘ChemoSpec-Ex.R’ failed
    The error most likely occurred in:
    
    > ### Name: clupaSpectra
    > ### Title: Hierarchical Cluster-Based Peak Alignment on a Spectra Object
    > ### Aliases: clupaSpectra
    > ### Keywords: utilities
    >
    > ### ** Examples
    >
    >
    > data(alignMUD)
    >
    > plotSpectra(alignMUD, which = 1:20, lab.pos = 4.5, offset = 0.1,
    + yrange = c(0, 1900), amp = 500, xlim = c(1.5, 1.8),
    + main = "Misaligned NMR Spectra (alignMUD)")
    >
    > aMUD <- clupaSpectra(alignMUD)
    Error in clupaSpectra(alignMUD) :
     You need to install package speaq to use this function
    Execution halted
Flavor: r-release-osx-x86_64

Version: 4.4.17
Check: re-building of vignette outputs
Result: WARN
    Error in re-building vignettes:
     ...
    Warning: running command 'kpsewhich framed.sty' had status 1
    Warning in test_latex_pkg("framed", system.file("misc", "framed.sty", package = "knitr")) :
     unable to find LaTeX package 'framed'; will use a copy from knitr
    Error in texi2dvi(file = file, pdf = TRUE, clean = clean, quiet = quiet, :
     Running 'texi2dvi' on 'ChemoSpec.tex' failed.
    LaTeX errors:
    ! LaTeX Error: File `ccaption.sty' not found.
    
    Type X to quit or <RETURN> to proceed,
    or enter new name. (Default extension: sty)
    
    ! Emergency stop.
    <read *>
    
    l.71 \captionnamefont
     {\bfseries\large}^^M
    ! ==> Fatal error occurred, no output PDF file produced!
    Calls: buildVignettes -> texi2pdf -> texi2dvi
    Execution halted
Flavor: r-release-osx-x86_64